Literature DB >> 22412723

1-Formyl-c-3,t-3-dimethyl-r-2,c-6-di-phenyl-piperidin-4-one.

K Ravichandran, P Sakthivel, P Ramesh, S Ponnuswamy, M N Ponnuswamy.   

Abstract

In the title compound, C(20)H(21)NO(2), the piperidine ring adopts a distorted boat conformation. The phenyl rings substituted at the 2- and 6-positions of the piperidine ring subtend angles of 86.0 (1) and 67.3 (1)° with the mean plane of the piperidine ring (all six non-H atoms). The crystal packing features C-H⋯O inter-actions.

Entities:  

Year:  2012        PMID: 22412723      PMCID: PMC3297920          DOI: 10.1107/S1600536812007015

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of piperidine derivatives, see: Aridoss et al. (2009 ▶); Nalanishi et al. (1974 ▶); Michael (2001 ▶); Pinder (1992 ▶); Rubiralta et al. (1991 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For asymmetry parameters, see: Nardelli (1983 ▶). For hydrogen-bond motifs, see: Bernstein et al.(1995 ▶).

Experimental

Crystal data

C20H21NO2 M = 307.38 Monoclinic, a = 10.6604 (6) Å b = 15.7278 (7) Å c = 10.8066 (5) Å β = 110.120 (2)° V = 1701.31 (15) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEX CCD detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.985, T max = 0.985 16240 measured reflections 4162 independent reflections 2769 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.125 S = 1.04 4162 reflections 209 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.13 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT-Plus (Bruker, 1998 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812007015/bt5783sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812007015/bt5783Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812007015/bt5783Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H21NO2F(000) = 656
Mr = 307.38Dx = 1.200 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2769 reflections
a = 10.6604 (6) Åθ = 2.3–28.3°
b = 15.7278 (7) ŵ = 0.08 mm1
c = 10.8066 (5) ÅT = 293 K
β = 110.120 (2)°Block, yellow
V = 1701.31 (15) Å30.20 × 0.20 × 0.20 mm
Z = 4
Bruker SMART APEX CCD detector diffractometer4162 independent reflections
Radiation source: fine-focus sealed tube2769 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.021
ω scansθmax = 28.3°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 1998)h = −13→9
Tmin = 0.985, Tmax = 0.985k = −17→20
16240 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.125w = 1/[σ2(Fo2) + (0.0489P)2 + 0.2736P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
4162 reflectionsΔρmax = 0.19 e Å3
209 parametersΔρmin = −0.13 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0063 (15)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.33930 (11)0.19983 (7)0.96574 (9)0.0689 (3)
O20.12616 (13)0.21093 (8)0.35746 (10)0.0845 (4)
N10.20536 (10)0.17426 (7)0.75311 (10)0.0487 (3)
C20.31776 (13)0.17185 (9)0.70280 (12)0.0483 (3)
H20.39140.20170.76880.058*
C30.28375 (14)0.22558 (9)0.57618 (13)0.0554 (4)
C40.15392 (15)0.19561 (10)0.47344 (13)0.0597 (4)
C50.05906 (14)0.14749 (10)0.52365 (12)0.0598 (4)
H5A0.07810.08720.52260.072*
H5B−0.03120.15670.46330.072*
C60.06466 (13)0.17169 (9)0.66235 (13)0.0530 (3)
H60.02750.22900.65820.064*
C70.22970 (15)0.19192 (9)0.88088 (13)0.0563 (4)
H70.15580.19880.90710.068*
C80.36733 (12)0.08118 (9)0.69907 (12)0.0477 (3)
C90.45199 (14)0.04765 (10)0.81673 (13)0.0583 (4)
H90.47580.08080.89260.070*
C100.50188 (17)−0.03415 (12)0.82365 (16)0.0715 (5)
H100.5580−0.05550.90380.086*
C110.46891 (17)−0.08374 (11)0.71304 (19)0.0732 (5)
H110.5018−0.13890.71770.088*
C120.38724 (18)−0.05151 (12)0.59586 (18)0.0781 (5)
H120.3655−0.08470.52010.094*
C130.33629 (16)0.03008 (11)0.58839 (15)0.0683 (4)
H130.28030.05080.50770.082*
C140.40046 (17)0.22591 (12)0.52432 (16)0.0751 (5)
H14A0.47970.24550.59230.113*
H14B0.38010.26310.44950.113*
H14C0.41480.16930.49860.113*
C150.25767 (18)0.31820 (10)0.60864 (17)0.0709 (4)
H15A0.18430.31940.64090.106*
H15B0.23630.35230.53040.106*
H15C0.33620.34040.67470.106*
C16−0.01874 (13)0.11249 (10)0.71207 (13)0.0553 (4)
C17−0.14145 (15)0.13908 (12)0.71422 (15)0.0681 (4)
H17−0.17200.19350.68540.082*
C18−0.21912 (18)0.08524 (16)0.75901 (18)0.0855 (6)
H18−0.30180.10350.75990.103*
C19−0.1747 (2)0.00528 (16)0.8021 (2)0.0905 (6)
H19−0.2269−0.03070.83260.109*
C20−0.0538 (2)−0.02166 (14)0.8001 (2)0.0942 (6)
H20−0.0238−0.07610.82910.113*
C210.02406 (18)0.03149 (12)0.75529 (19)0.0774 (5)
H210.10630.01260.75420.093*
U11U22U33U12U13U23
O10.0658 (7)0.0879 (8)0.0450 (5)−0.0068 (6)0.0089 (5)−0.0128 (5)
O20.0962 (9)0.1036 (10)0.0445 (6)0.0147 (7)0.0125 (5)0.0114 (5)
N10.0453 (6)0.0573 (7)0.0408 (5)0.0030 (5)0.0113 (4)−0.0060 (5)
C20.0450 (7)0.0562 (8)0.0407 (6)0.0011 (6)0.0112 (5)−0.0026 (5)
C30.0598 (8)0.0586 (9)0.0485 (7)0.0094 (7)0.0194 (6)0.0058 (6)
C40.0674 (9)0.0618 (9)0.0452 (7)0.0186 (7)0.0135 (6)0.0028 (6)
C50.0524 (8)0.0704 (10)0.0453 (7)0.0085 (7)0.0024 (6)−0.0057 (6)
C60.0457 (7)0.0581 (9)0.0497 (7)0.0070 (6)0.0095 (5)−0.0057 (6)
C70.0590 (8)0.0627 (9)0.0473 (7)−0.0003 (7)0.0182 (6)−0.0084 (6)
C80.0401 (6)0.0572 (8)0.0456 (6)0.0030 (6)0.0144 (5)0.0026 (5)
C90.0570 (8)0.0741 (10)0.0458 (7)0.0094 (7)0.0201 (6)0.0095 (6)
C100.0744 (10)0.0827 (12)0.0666 (9)0.0262 (9)0.0358 (8)0.0315 (8)
C110.0781 (11)0.0592 (10)0.0960 (12)0.0132 (8)0.0477 (10)0.0143 (9)
C120.0754 (11)0.0703 (12)0.0831 (11)0.0124 (9)0.0204 (9)−0.0172 (9)
C130.0650 (9)0.0731 (11)0.0552 (8)0.0185 (8)0.0057 (7)−0.0085 (7)
C140.0763 (11)0.0899 (13)0.0677 (9)0.0150 (9)0.0357 (8)0.0199 (8)
C150.0842 (11)0.0568 (10)0.0740 (10)0.0053 (8)0.0302 (9)0.0061 (7)
C160.0469 (7)0.0628 (9)0.0522 (7)−0.0006 (7)0.0117 (6)−0.0136 (6)
C170.0517 (8)0.0876 (12)0.0619 (9)0.0046 (8)0.0157 (7)−0.0091 (8)
C180.0546 (10)0.1252 (18)0.0783 (11)−0.0028 (11)0.0249 (8)−0.0087 (11)
C190.0761 (13)0.1046 (17)0.0937 (13)−0.0247 (12)0.0330 (10)−0.0060 (12)
C200.0880 (14)0.0718 (13)0.1283 (17)−0.0076 (10)0.0441 (13)0.0039 (11)
C210.0652 (10)0.0650 (11)0.1073 (13)0.0013 (8)0.0365 (10)−0.0046 (9)
O1—C71.2183 (17)C10—H100.9300
O2—C41.2088 (16)C11—C121.364 (2)
N1—C71.3433 (16)C11—H110.9300
N1—C21.4768 (16)C12—C131.385 (2)
N1—C61.4837 (16)C12—H120.9300
C2—C81.5261 (19)C13—H130.9300
C2—C31.5416 (18)C14—H14A0.9600
C2—H20.9800C14—H14B0.9600
C3—C41.521 (2)C14—H14C0.9600
C3—C141.530 (2)C15—H15A0.9600
C3—C151.546 (2)C15—H15B0.9600
C4—C51.506 (2)C15—H15C0.9600
C5—C61.5276 (18)C16—C211.379 (2)
C5—H5A0.9700C16—C171.381 (2)
C5—H5B0.9700C17—C181.383 (3)
C6—C161.508 (2)C17—H170.9300
C6—H60.9800C18—C191.368 (3)
C7—H70.9300C18—H180.9300
C8—C131.3834 (19)C19—C201.364 (3)
C8—C91.3856 (18)C19—H190.9300
C9—C101.384 (2)C20—C211.378 (3)
C9—H90.9300C20—H200.9300
C10—C111.368 (2)C21—H210.9300
C7—N1—C2119.30 (11)C9—C10—H10119.9
C7—N1—C6118.63 (11)C12—C11—C10119.29 (16)
C2—N1—C6121.31 (10)C12—C11—H11120.4
N1—C2—C8111.46 (11)C10—C11—H11120.4
N1—C2—C3109.86 (10)C11—C12—C13120.72 (16)
C8—C2—C3117.81 (11)C11—C12—H12119.6
N1—C2—H2105.6C13—C12—H12119.6
C8—C2—H2105.6C8—C13—C12121.03 (14)
C3—C2—H2105.6C8—C13—H13119.5
C4—C3—C14112.59 (12)C12—C13—H13119.5
C4—C3—C2110.81 (12)C3—C14—H14A109.5
C14—C3—C2110.75 (11)C3—C14—H14B109.5
C4—C3—C15105.55 (12)H14A—C14—H14B109.5
C14—C3—C15108.19 (13)C3—C14—H14C109.5
C2—C3—C15108.72 (11)H14A—C14—H14C109.5
O2—C4—C5121.24 (14)H14B—C14—H14C109.5
O2—C4—C3122.13 (15)C3—C15—H15A109.5
C5—C4—C3116.61 (11)C3—C15—H15B109.5
C4—C5—C6115.08 (12)H15A—C15—H15B109.5
C4—C5—H5A108.5C3—C15—H15C109.5
C6—C5—H5A108.5H15A—C15—H15C109.5
C4—C5—H5B108.5H15B—C15—H15C109.5
C6—C5—H5B108.5C21—C16—C17118.60 (16)
H5A—C5—H5B107.5C21—C16—C6121.60 (13)
N1—C6—C16111.54 (11)C17—C16—C6119.79 (14)
N1—C6—C5110.17 (11)C16—C17—C18120.33 (18)
C16—C6—C5111.52 (12)C16—C17—H17119.8
N1—C6—H6107.8C18—C17—H17119.8
C16—C6—H6107.8C19—C18—C17120.22 (18)
C5—C6—H6107.8C19—C18—H18119.9
O1—C7—N1126.23 (14)C17—C18—H18119.9
O1—C7—H7116.9C20—C19—C18119.9 (2)
N1—C7—H7116.9C20—C19—H19120.0
C13—C8—C9117.32 (13)C18—C19—H19120.0
C13—C8—C2125.71 (12)C19—C20—C21120.2 (2)
C9—C8—C2116.97 (12)C19—C20—H20119.9
C10—C9—C8121.34 (14)C21—C20—H20119.9
C10—C9—H9119.3C20—C21—C16120.67 (17)
C8—C9—H9119.3C20—C21—H21119.7
C11—C10—C9120.28 (14)C16—C21—H21119.7
C11—C10—H10119.9
C7—N1—C2—C896.72 (14)C6—N1—C7—O1−176.66 (14)
C6—N1—C2—C8−93.42 (13)N1—C2—C8—C13100.41 (16)
C7—N1—C2—C3−130.81 (13)C3—C2—C8—C13−27.9 (2)
C6—N1—C2—C339.05 (16)N1—C2—C8—C9−80.34 (14)
N1—C2—C3—C4−55.83 (14)C3—C2—C8—C9151.32 (13)
C8—C2—C3—C473.26 (15)C13—C8—C9—C10−1.0 (2)
N1—C2—C3—C14178.49 (12)C2—C8—C9—C10179.73 (13)
C8—C2—C3—C14−52.43 (17)C8—C9—C10—C110.5 (2)
N1—C2—C3—C1559.74 (15)C9—C10—C11—C120.5 (3)
C8—C2—C3—C15−171.17 (12)C10—C11—C12—C13−0.9 (3)
C14—C3—C4—O2−34.5 (2)C9—C8—C13—C120.5 (2)
C2—C3—C4—O2−159.11 (14)C2—C8—C13—C12179.78 (15)
C15—C3—C4—O283.37 (17)C11—C12—C13—C80.4 (3)
C14—C3—C4—C5147.10 (14)N1—C6—C16—C21−47.78 (18)
C2—C3—C4—C522.44 (17)C5—C6—C16—C2175.87 (17)
C15—C3—C4—C5−95.08 (15)N1—C6—C16—C17132.58 (13)
O2—C4—C5—C6−148.57 (14)C5—C6—C16—C17−103.77 (15)
C3—C4—C5—C629.89 (18)C21—C16—C17—C180.0 (2)
C7—N1—C6—C16−53.53 (16)C6—C16—C17—C18179.70 (14)
C2—N1—C6—C16136.54 (12)C16—C17—C18—C190.3 (3)
C7—N1—C6—C5−177.94 (13)C17—C18—C19—C20−0.4 (3)
C2—N1—C6—C512.13 (18)C18—C19—C20—C210.2 (3)
C4—C5—C6—N1−47.61 (17)C19—C20—C21—C160.1 (3)
C4—C5—C6—C16−172.03 (12)C17—C16—C21—C20−0.2 (3)
C2—N1—C7—O1−6.5 (2)C6—C16—C21—C20−179.87 (16)
D—H···AD—HH···AD···AD—H···A
C6—H6···O1i0.982.593.2951 (17)129
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯O1i0.982.593.2951 (17)129

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and spectral characterization of a new class of N-(N-methylpiperazinoacetyl)-2,6-diarylpiperidin-4-ones: antimicrobial, analgesic and antipyretic studies.

Authors:  G Aridoss; P Parthiban; R Ramachandran; M Prakash; S Kabilan; Yeon Tae Jeong
Journal:  Eur J Med Chem       Date:  2008-04-07       Impact factor: 6.514

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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