Literature DB >> 22412717

6-Methyl-3-phenyl-2-sulfanyl-idene-1,2,3,4-tetra-hydro-quinazolin-4-one.

Adel S El-Azab, Alaa A-M Abdel-Aziz, Seik Weng Ng, Edward R T Tiekink.   

Abstract

The title compound, C(15)H(12)N(2)OS, exists as the thione tautomer in the solid state. The phenyl group is almost perpendicular [dihedral angle = 87.96 (5)°] to the fused ring system (r.m.s. deviation = 0.036 Å for 13 ring and exocyclic non-H atoms). In the crystal, centrosymmetric dimers, sustained by pairs of N-H⋯S hydrogen bonds, are connected into layers parallel to (-101) by C-H⋯O and C-H⋯S inter-actions.

Entities:  

Year:  2012        PMID: 22412717      PMCID: PMC3297914          DOI: 10.1107/S1600536812007301

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For recent studies on synthesis, drug discovery and crystal structures of quinazoline-4(3H)-one derivatives, see: El-Azab & El-Tahir (2012 ▶); El-Azab et al. (2011 ▶, 2010 ▶). For the anti­microbial activity of the title compound, see: Al-Omar et al. (2004 ▶). For the structures of related compounds, see: Bowman et al. (2007 ▶); Hashim et al. (2010 ▶).

Experimental

Crystal data

C15H12N2OS M = 268.33 Monoclinic, a = 12.7770 (3) Å b = 5.1384 (1) Å c = 19.0973 (4) Å β = 91.814 (2)° V = 1253.17 (5) Å3 Z = 4 Cu Kα radiation μ = 2.23 mm−1 T = 100 K 0.35 × 0.15 × 0.05 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.967, T max = 0.998 4636 measured reflections 2576 independent reflections 2348 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.098 S = 1.06 2576 reflections 177 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.25 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812007301/qm2054sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812007301/qm2054Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812007301/qm2054Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12N2OSF(000) = 560
Mr = 268.33Dx = 1.422 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ynCell parameters from 2386 reflections
a = 12.7770 (3) Åθ = 3.5–76.4°
b = 5.1384 (1) ŵ = 2.23 mm1
c = 19.0973 (4) ÅT = 100 K
β = 91.814 (2)°Prism, colourless
V = 1253.17 (5) Å30.35 × 0.15 × 0.05 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector2576 independent reflections
Radiation source: SuperNova (Cu) X-ray Source2348 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.016
Detector resolution: 10.4041 pixels mm-1θmax = 76.6°, θmin = 4.1°
ω scanh = −15→16
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −5→6
Tmin = 0.967, Tmax = 0.998l = −14→24
4636 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0613P)2 + 0.3083P] where P = (Fo2 + 2Fc2)/3
2576 reflections(Δ/σ)max = 0.001
177 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.56616 (3)0.52832 (7)0.394981 (16)0.01717 (12)
O10.35822 (8)−0.1192 (2)0.25706 (5)0.0181 (2)
N10.45653 (9)0.1596 (2)0.32532 (6)0.0149 (2)
H1n0.4357 (15)0.305 (4)0.4827 (11)0.029 (5)*
N20.42228 (9)0.2138 (2)0.44293 (6)0.0161 (2)
C10.37571 (11)−0.0266 (3)0.31493 (7)0.0150 (3)
C20.31942 (10)−0.0982 (3)0.37768 (7)0.0156 (3)
C30.24261 (10)−0.2920 (3)0.37432 (7)0.0173 (3)
H30.2250−0.37220.33070.021*
C40.19179 (11)−0.3686 (3)0.43408 (7)0.0182 (3)
C50.22073 (11)−0.2484 (3)0.49797 (7)0.0195 (3)
H50.1871−0.30010.53940.023*
C60.29690 (11)−0.0568 (3)0.50213 (7)0.0179 (3)
H60.31560.02100.54590.021*
C70.34592 (11)0.0206 (3)0.44129 (7)0.0156 (3)
C90.47714 (10)0.2888 (3)0.38744 (7)0.0149 (3)
C80.10873 (12)−0.5770 (3)0.42997 (8)0.0229 (3)
H8A0.1314−0.71760.39930.034*
H8B0.0432−0.50240.41100.034*
H8C0.0976−0.64650.47690.034*
C100.52338 (10)0.2014 (3)0.26589 (7)0.0154 (3)
C110.60838 (11)0.0364 (3)0.25902 (8)0.0188 (3)
H110.6233−0.09420.29310.023*
C120.67148 (12)0.0652 (3)0.20130 (8)0.0208 (3)
H120.7303−0.04520.19590.025*
C130.64818 (11)0.2554 (3)0.15178 (7)0.0208 (3)
H130.69100.27460.11240.025*
C140.56249 (12)0.4182 (3)0.15946 (7)0.0217 (3)
H140.54710.54850.12540.026*
C150.49894 (11)0.3912 (3)0.21705 (7)0.0193 (3)
H150.44000.50130.22250.023*
U11U22U33U12U13U23
S10.0194 (2)0.01951 (19)0.01264 (19)−0.00399 (12)0.00160 (13)−0.00051 (12)
O10.0211 (5)0.0210 (5)0.0122 (5)−0.0004 (4)−0.0006 (4)−0.0024 (4)
N10.0169 (5)0.0178 (6)0.0102 (5)−0.0002 (4)0.0019 (4)−0.0005 (4)
N20.0189 (6)0.0194 (6)0.0101 (5)−0.0025 (5)0.0016 (4)−0.0016 (5)
C10.0154 (6)0.0161 (6)0.0136 (6)0.0029 (5)−0.0003 (5)0.0006 (5)
C20.0156 (6)0.0179 (6)0.0132 (6)0.0015 (5)0.0007 (5)0.0012 (5)
C30.0168 (6)0.0197 (7)0.0153 (6)0.0001 (5)−0.0004 (5)−0.0009 (5)
C40.0158 (6)0.0190 (7)0.0199 (7)0.0012 (5)0.0008 (5)0.0013 (5)
C50.0193 (6)0.0229 (7)0.0165 (6)0.0013 (5)0.0052 (5)0.0029 (6)
C60.0201 (7)0.0212 (7)0.0125 (6)0.0008 (5)0.0023 (5)−0.0002 (5)
C70.0145 (6)0.0176 (6)0.0145 (6)0.0011 (5)0.0005 (5)0.0002 (5)
C90.0155 (6)0.0163 (6)0.0129 (6)0.0015 (5)0.0002 (5)0.0004 (5)
C80.0198 (7)0.0245 (7)0.0245 (7)−0.0038 (6)0.0032 (6)0.0017 (6)
C100.0176 (6)0.0183 (6)0.0103 (6)−0.0027 (5)0.0026 (5)−0.0021 (5)
C110.0199 (7)0.0199 (7)0.0166 (7)0.0013 (5)0.0024 (5)0.0032 (5)
C120.0187 (7)0.0225 (7)0.0213 (7)0.0011 (6)0.0056 (6)−0.0005 (6)
C130.0230 (7)0.0249 (7)0.0148 (6)−0.0055 (6)0.0060 (5)−0.0011 (6)
C140.0283 (8)0.0220 (7)0.0148 (7)−0.0007 (6)0.0024 (6)0.0051 (6)
C150.0226 (7)0.0192 (7)0.0161 (6)0.0025 (6)0.0024 (5)−0.0008 (6)
S1—C91.6788 (14)C6—C71.3953 (19)
O1—C11.2175 (17)C6—H60.9500
N1—C91.3776 (17)C8—H8A0.9800
N1—C11.4171 (18)C8—H8B0.9800
N1—C101.4578 (16)C8—H8C0.9800
N2—C91.3454 (17)C10—C151.379 (2)
N2—C71.3913 (18)C10—C111.388 (2)
N2—H1n0.91 (2)C11—C121.3940 (19)
C1—C21.4639 (18)C11—H110.9500
C2—C71.3918 (19)C12—C131.386 (2)
C2—C31.398 (2)C12—H120.9500
C3—C41.3877 (19)C13—C141.389 (2)
C3—H30.9500C13—H130.9500
C4—C51.406 (2)C14—C151.3945 (19)
C4—C81.508 (2)C14—H140.9500
C5—C61.385 (2)C15—H150.9500
C5—H50.9500
C9—N1—C1124.38 (11)N2—C9—N1116.73 (12)
C9—N1—C10119.89 (11)N2—C9—S1120.73 (10)
C1—N1—C10115.66 (11)N1—C9—S1122.54 (10)
C9—N2—C7124.69 (12)C4—C8—H8A109.5
C9—N2—H1n115.0 (13)C4—C8—H8B109.5
C7—N2—H1n120.2 (13)H8A—C8—H8B109.5
O1—C1—N1120.20 (12)C4—C8—H8C109.5
O1—C1—C2124.34 (13)H8A—C8—H8C109.5
N1—C1—C2115.45 (12)H8B—C8—H8C109.5
C7—C2—C3120.25 (12)C15—C10—C11121.98 (12)
C7—C2—C1119.46 (13)C15—C10—N1120.36 (12)
C3—C2—C1120.24 (12)C11—C10—N1117.59 (12)
C4—C3—C2120.66 (13)C10—C11—C12118.93 (13)
C4—C3—H3119.7C10—C11—H11120.5
C2—C3—H3119.7C12—C11—H11120.5
C3—C4—C5118.17 (13)C13—C12—C11119.84 (14)
C3—C4—C8120.35 (13)C13—C12—H12120.1
C5—C4—C8121.48 (13)C11—C12—H12120.1
C6—C5—C4121.79 (13)C12—C13—C14120.37 (13)
C6—C5—H5119.1C12—C13—H13119.8
C4—C5—H5119.1C14—C13—H13119.8
C5—C6—C7119.22 (13)C13—C14—C15120.25 (13)
C5—C6—H6120.4C13—C14—H14119.9
C7—C6—H6120.4C15—C14—H14119.9
N2—C7—C2118.93 (12)C10—C15—C14118.62 (13)
N2—C7—C6121.17 (13)C10—C15—H15120.7
C2—C7—C6119.90 (13)C14—C15—H15120.7
C9—N1—C1—O1175.07 (13)C5—C6—C7—N2179.51 (13)
C10—N1—C1—O1−7.96 (18)C5—C6—C7—C2−1.2 (2)
C9—N1—C1—C2−6.19 (19)C7—N2—C9—N1−1.3 (2)
C10—N1—C1—C2170.77 (11)C7—N2—C9—S1178.88 (10)
O1—C1—C2—C7−179.92 (13)C1—N1—C9—N26.2 (2)
N1—C1—C2—C71.40 (19)C10—N1—C9—N2−170.65 (12)
O1—C1—C2—C32.7 (2)C1—N1—C9—S1−173.97 (10)
N1—C1—C2—C3−176.00 (12)C10—N1—C9—S19.18 (18)
C7—C2—C3—C40.0 (2)C9—N1—C10—C15−91.74 (16)
C1—C2—C3—C4177.40 (13)C1—N1—C10—C1591.15 (16)
C2—C3—C4—C5−0.9 (2)C9—N1—C10—C1191.23 (16)
C2—C3—C4—C8179.76 (13)C1—N1—C10—C11−85.88 (15)
C3—C4—C5—C60.6 (2)C15—C10—C11—C120.6 (2)
C8—C4—C5—C6−179.97 (13)N1—C10—C11—C12177.61 (13)
C4—C5—C6—C70.4 (2)C10—C11—C12—C13−0.5 (2)
C9—N2—C7—C2−3.2 (2)C11—C12—C13—C140.2 (2)
C9—N2—C7—C6176.10 (13)C12—C13—C14—C15−0.2 (2)
C3—C2—C7—N2−179.69 (12)C11—C10—C15—C14−0.6 (2)
C1—C2—C7—N22.9 (2)N1—C10—C15—C14−177.45 (13)
C3—C2—C7—C61.0 (2)C13—C14—C15—C100.3 (2)
C1—C2—C7—C6−176.36 (12)
D—H···AD—HH···AD···AD—H···A
N2—H1n···S1i0.91 (2)2.49 (2)3.3662 (12)163.6 (17)
C3—H3···O1ii0.952.333.2522 (17)163
C11—H11···S1iii0.952.863.7333 (16)154
C15—H15···O1iv0.952.323.1988 (18)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1n⋯S1i0.91 (2)2.49 (2)3.3662 (12)163.6 (17)
C3—H3⋯O1ii0.952.333.2522 (17)163
C11—H11⋯S1iii0.952.863.7333 (16)154
C15—H15⋯O1iv0.952.323.1988 (18)154

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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2.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Design, synthesis and biological evaluation of novel quinazoline derivatives as potential antitumor agents: molecular docking study.

Authors:  Adel S El-Azab; Mohamed A Al-Omar; Alaa A-M Abdel-Aziz; Naglaa I Abdel-Aziz; Magda A-A el-Sayed; Abdulaziz M Aleisa; Mohamed M Sayed-Ahmed; Sami G Abdel-Hamide
Journal:  Eur J Med Chem       Date:  2010-06-16       Impact factor: 6.514

4.  Radical reactions with 3H-quinazolin-4-ones: synthesis of deoxyvasicinone, mackinazolinone, luotonin A, rutaecarpine and tryptanthrin.

Authors:  W Russell Bowman; Mark R J Elsegood; Tobias Stein; George W Weaver
Journal:  Org Biomol Chem       Date:  2006-11-03       Impact factor: 3.876

5.  6-Chloro-3-phenethyl-2-thioxo-2,3-di-hydro-quinazolin-4(1H)-one.

Authors:  Norhafizah Mohd Hashim; Hasnah Osman; Afidah Abdul Rahim; Chin Sing Yeap; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-27
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1.  Synthesis, in vitro antitumour activity, and molecular docking study of novel 2-substituted mercapto-3-(3,4,5-trimethoxybenzyl)-4(3H)-quinazolinone analogues.

Authors:  Adel S El-Azab; Alaa A-M Abdel-Aziz; Hazem A Ghabbour; Manal A Al-Gendy
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