Literature DB >> 22412626

Ethyl 2-[(tert-but-oxy-carbon-yl)amino]-thia-zole-5-carboxyl-ate.

Weisong Wang1, Bohua Zhong, Weiguo Shi.   

Abstract

In the crystal of the title compound, C(11)H(16)N(2)O(4)S, molecules are linked via pairs of N-H⋯N hydrogen bonds to form inversion dimers. The dimers are linked by a weak C-H⋯O interaction to form chains propagating along direction [100].

Entities:  

Year:  2012        PMID: 22412626      PMCID: PMC3295515          DOI: 10.1107/S1600536812005971

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the synthesis, see: Upadhyaya et al. (2007 ▶). For the bioactivity of thia­zoles, see: Barradas et al. (2011 ▶); Zaharia et al. (2010 ▶). For related structures, see: Liu et al. (2011 ▶); Wang (2011 ▶).

Experimental

Crystal data

C11H16N2O4S M = 272.32 Monoclinic, a = 5.8258 (12) Å b = 9.4916 (19) Å c = 24.350 (5) Å β = 92.37 (3)° V = 1345.3 (5) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 113 K 0.26 × 0.24 × 0.22 mm

Data collection

Rigaku Saturn CCD diffractometer Absorption correction: multi-scan CrystalClear (Rigaku, 2005 ▶) T min = 0.938, T max = 0.947 11392 measured reflections 3180 independent reflections 2177 reflections with I > 2σ(I) R int = 0.057

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.155 S = 1.07 3180 reflections 172 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.46 e Å−3 Δρmin = −0.46 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: CrystalStructure (Rigaku, 2005 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812005971/ff2055sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812005971/ff2055Isup4.hkl Supplementary material file. DOI: 10.1107/S1600536812005971/ff2055Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H16N2O4SF(000) = 576
Mr = 272.32Dx = 1.345 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 5.8258 (12) ÅCell parameters from 2589 reflections
b = 9.4916 (19) Åθ = 2.3–28.0°
c = 24.350 (5) ŵ = 0.25 mm1
β = 92.37 (3)°T = 113 K
V = 1345.3 (5) Å3Block, colourless
Z = 40.26 × 0.24 × 0.22 mm
Rigaku Saturn CCD diffractometer3180 independent reflections
Radiation source: rotating anode2177 reflections with I > 2σ(I)
Confocal monochromatorRint = 0.057
Detector resolution: 7.31 pixels mm-1θmax = 28.0°, θmin = 2.3°
ω and φ scansh = −7→7
Absorption correction: multi-scan CrystalClear (Rigaku, 2005)k = −12→12
Tmin = 0.938, Tmax = 0.947l = −32→30
11392 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.054H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.155w = 1/[σ2(Fo2) + (0.0806P)2] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
3180 reflectionsΔρmax = 0.46 e Å3
172 parametersΔρmin = −0.46 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.014 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.48801 (9)0.74851 (5)0.499500 (19)0.0218 (2)
O10.4912 (3)0.86694 (18)0.65493 (6)0.0358 (4)
O20.2511 (3)0.91136 (16)0.58203 (6)0.0277 (4)
O30.5169 (3)0.68642 (17)0.39011 (6)0.0287 (4)
O40.7506 (3)0.51367 (14)0.35826 (6)0.0211 (4)
N10.8382 (3)0.60995 (19)0.54014 (7)0.0240 (4)
N20.7723 (3)0.5693 (2)0.44654 (7)0.0229 (4)
C10.7172 (4)0.6345 (2)0.49427 (9)0.0211 (5)
C20.7472 (4)0.6836 (2)0.58220 (9)0.0251 (5)
H20.81210.67960.61860.030*
C30.5600 (4)0.7625 (2)0.56921 (8)0.0217 (5)
C40.4342 (4)0.8514 (2)0.60725 (9)0.0257 (5)
C50.1173 (5)1.0034 (3)0.61617 (11)0.0347 (6)
H5A0.21881.07270.63550.042*
H5B0.03770.94760.64400.042*
C6−0.0552 (4)1.0780 (3)0.57876 (11)0.0353 (6)
H6A0.02571.13410.55180.053*
H6B−0.15021.14020.60050.053*
H6C−0.15321.00840.55950.053*
C70.6642 (4)0.5978 (2)0.39667 (9)0.0222 (5)
C80.6805 (4)0.5341 (2)0.29934 (8)0.0203 (5)
C90.4230 (4)0.5149 (2)0.29012 (10)0.0253 (5)
H9A0.37790.42260.30420.038*
H9B0.38280.52040.25070.038*
H9C0.34230.58920.30950.038*
C100.7627 (4)0.6774 (2)0.28086 (10)0.0295 (5)
H10A0.67560.75130.29890.044*
H10B0.73910.68570.24090.044*
H10C0.92650.68790.29090.044*
C110.8063 (4)0.4163 (2)0.27124 (9)0.0257 (5)
H11A0.97180.42550.27930.039*
H11B0.77520.42200.23140.039*
H11C0.75310.32520.28480.039*
H2A0.881 (5)0.512 (3)0.4476 (13)0.047 (9)*
U11U22U33U12U13U23
S10.0254 (3)0.0232 (3)0.0166 (3)0.0059 (2)−0.0008 (2)−0.0012 (2)
O10.0432 (11)0.0404 (10)0.0237 (9)0.0136 (8)−0.0007 (7)−0.0049 (8)
O20.0284 (9)0.0279 (9)0.0267 (9)0.0098 (7)−0.0011 (6)−0.0062 (7)
O30.0319 (9)0.0309 (9)0.0231 (8)0.0136 (7)−0.0018 (6)−0.0013 (7)
O40.0237 (8)0.0235 (8)0.0161 (8)0.0064 (6)−0.0018 (6)−0.0022 (6)
N10.0288 (10)0.0242 (10)0.0188 (9)0.0043 (8)−0.0004 (7)0.0005 (7)
N20.0262 (10)0.0241 (10)0.0182 (9)0.0082 (8)−0.0007 (7)−0.0010 (7)
C10.0236 (11)0.0178 (11)0.0219 (11)0.0005 (9)0.0019 (8)−0.0002 (8)
C20.0302 (12)0.0247 (12)0.0202 (11)0.0027 (9)0.0010 (8)−0.0003 (9)
C30.0257 (11)0.0208 (11)0.0185 (10)0.0001 (9)−0.0005 (8)−0.0014 (8)
C40.0296 (12)0.0230 (12)0.0246 (12)0.0013 (10)0.0033 (9)−0.0007 (9)
C50.0353 (14)0.0347 (14)0.0342 (15)0.0132 (11)0.0041 (11)−0.0099 (11)
C60.0294 (13)0.0291 (13)0.0478 (16)0.0058 (10)0.0052 (11)−0.0024 (12)
C70.0241 (11)0.0204 (11)0.0221 (11)0.0022 (9)0.0018 (8)−0.0011 (9)
C80.0221 (11)0.0246 (11)0.0140 (10)0.0005 (9)−0.0005 (8)−0.0004 (8)
C90.0205 (11)0.0318 (13)0.0233 (12)−0.0004 (9)−0.0018 (9)0.0000 (9)
C100.0326 (13)0.0258 (13)0.0299 (12)−0.0068 (10)−0.0027 (9)0.0015 (10)
C110.0231 (12)0.0313 (13)0.0228 (11)0.0028 (9)0.0029 (8)−0.0080 (9)
S1—C11.727 (2)C5—H5A0.9900
S1—C31.737 (2)C5—H5B0.9900
O1—C41.204 (3)C6—H6A0.9800
O2—C41.336 (3)C6—H6B0.9800
O2—C51.455 (3)C6—H6C0.9800
O3—C71.208 (2)C8—C111.515 (3)
O4—C71.343 (2)C8—C101.517 (3)
O4—C81.488 (2)C8—C91.518 (3)
N1—C11.317 (3)C9—H9A0.9800
N1—C21.365 (3)C9—H9B0.9800
N2—C11.367 (3)C9—H9C0.9800
N2—C71.371 (3)C10—H10A0.9800
N2—H2A0.84 (3)C10—H10B0.9800
C2—C31.349 (3)C10—H10C0.9800
C2—H20.9500C11—H11A0.9800
C3—C41.471 (3)C11—H11B0.9800
C5—C61.505 (4)C11—H11C0.9800
C1—S1—C387.93 (10)H6A—C6—H6C109.5
C4—O2—C5115.48 (18)H6B—C6—H6C109.5
C7—O4—C8119.88 (16)O3—C7—O4127.3 (2)
C1—N1—C2109.57 (18)O3—C7—N2123.5 (2)
C1—N2—C7123.24 (19)O4—C7—N2109.13 (18)
C1—N2—H2A118 (2)O4—C8—C11102.75 (16)
C7—N2—H2A119 (2)O4—C8—C10108.99 (17)
N1—C1—N2120.32 (19)C11—C8—C10111.31 (18)
N1—C1—S1115.88 (16)O4—C8—C9110.91 (17)
N2—C1—S1123.78 (16)C11—C8—C9109.73 (18)
C3—C2—N1116.31 (19)C10—C8—C9112.70 (18)
C3—C2—H2121.8C8—C9—H9A109.5
N1—C2—H2121.8C8—C9—H9B109.5
C2—C3—C4126.1 (2)H9A—C9—H9B109.5
C2—C3—S1110.30 (16)C8—C9—H9C109.5
C4—C3—S1123.57 (16)H9A—C9—H9C109.5
O1—C4—O2125.0 (2)H9B—C9—H9C109.5
O1—C4—C3123.6 (2)C8—C10—H10A109.5
O2—C4—C3111.36 (19)C8—C10—H10B109.5
O2—C5—C6107.3 (2)H10A—C10—H10B109.5
O2—C5—H5A110.3C8—C10—H10C109.5
C6—C5—H5A110.3H10A—C10—H10C109.5
O2—C5—H5B110.3H10B—C10—H10C109.5
C6—C5—H5B110.3C8—C11—H11A109.5
H5A—C5—H5B108.5C8—C11—H11B109.5
C5—C6—H6A109.5H11A—C11—H11B109.5
C5—C6—H6B109.5C8—C11—H11C109.5
H6A—C6—H6B109.5H11A—C11—H11C109.5
C5—C6—H6C109.5H11B—C11—H11C109.5
C2—N1—C1—N2−178.4 (2)C2—C3—C4—O12.5 (4)
C2—N1—C1—S10.3 (2)S1—C3—C4—O1−175.89 (19)
C7—N2—C1—N1−175.1 (2)C2—C3—C4—O2−177.5 (2)
C7—N2—C1—S16.3 (3)S1—C3—C4—O24.1 (3)
C3—S1—C1—N1−0.62 (17)C4—O2—C5—C6170.96 (19)
C3—S1—C1—N2178.0 (2)C8—O4—C7—O36.0 (3)
C1—N1—C2—C30.3 (3)C8—O4—C7—N2−173.39 (17)
N1—C2—C3—C4−179.4 (2)C1—N2—C7—O32.8 (4)
N1—C2—C3—S1−0.8 (3)C1—N2—C7—O4−177.82 (18)
C1—S1—C3—C20.74 (17)C7—O4—C8—C11−177.64 (17)
C1—S1—C3—C4179.4 (2)C7—O4—C8—C1064.2 (2)
C5—O2—C4—O11.0 (3)C7—O4—C8—C9−60.4 (2)
C5—O2—C4—C3−179.05 (19)
D—H···AD—HH···AD···AD—H···A
N2—H2A···N1i0.84 (3)2.01 (3)2.844 (3)172 (3)
C10—H10B···O1ii0.982.543.418 (3)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯N1i0.84 (3)2.01 (3)2.844 (3)172 (3)
C10—H10B⋯O1ii0.982.543.418 (3)149

Symmetry codes: (i) ; (ii) .

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