Literature DB >> 22412612

(Z)-2-{2,4-Dimeth-oxy-6-[(E)-4-meth-oxy-styr-yl]benzyl-idene}quinuclidin-3-one.

Nikhil Reddy Madadi, Sean Parkin, Peter A Crooks.   

Abstract

The crystal structure of the title compound, C(25)H(27)NO(4), shows the presence of a double bond with Z geometry which connects the quinuclidin-3-one ring and the trimeth-oxy-resveratrol moiety. The dihedral angle between the two benzene rings in the stilbene skeleton is 32.80 (8)°.

Entities:  

Year:  2012        PMID: 22412612      PMCID: PMC3295501          DOI: 10.1107/S1600536812005843

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related biological activity literature, see: Aggarwal et al. (2004 ▶); Pettit et al. (1995 ▶). For related structure–activity studies, see: Cushman et al. (1991 ▶). For related pharmaco­kinetic and pharmacodynamic studies, see: Jeandet et al. (1979 ▶); Trela et al. (1996 ▶).

Experimental

Crystal data

C25H27NO4 M = 405.48 Orthorhombic, a = 36.1068 (1) Å b = 6.8748 (1) Å c = 8.4813 (4) Å V = 2105.29 (10) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 90 K 0.26 × 0.20 × 0.08 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.978, T max = 0.993 39211 measured reflections 2554 independent reflections 2313 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.090 S = 1.04 2554 reflections 274 parameters 1 restraint H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.19 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97 and local procedures. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812005843/fj2476sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812005843/fj2476Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812005843/fj2476Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H27NO4F(000) = 864
Mr = 405.48Dx = 1.279 Mg m3
Orthorhombic, Pca21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2acCell parameters from 2806 reflections
a = 36.1068 (1) Åθ = 1.0–27.5°
b = 6.8748 (1) ŵ = 0.09 mm1
c = 8.4813 (4) ÅT = 90 K
V = 2105.29 (10) Å3Plate, pale yellow
Z = 40.26 × 0.20 × 0.08 mm
Nonius KappaCCD diffractometer2554 independent reflections
Radiation source: fine-focus sealed tube2313 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.051
Detector resolution: 9.1 pixels mm-1θmax = 27.5°, θmin = 2.3°
ω scans at fixed χ = 55°h = −46→46
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997)k = −8→8
Tmin = 0.978, Tmax = 0.993l = −10→11
39211 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.055P)2 + 0.423P] where P = (Fo2 + 2Fc2)/3
2554 reflections(Δ/σ)max < 0.001
274 parametersΔρmax = 0.17 e Å3
1 restraintΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.38605 (5)0.0394 (3)−0.0016 (2)0.0199 (4)
C20.41142 (5)−0.0668 (3)−0.0926 (2)0.0209 (4)
H20.4360−0.0203−0.10520.025*
O30.42772 (4)−0.3314 (2)−0.25036 (18)0.0242 (3)
C30.40072 (5)−0.2399 (3)−0.1643 (2)0.0208 (4)
C40.36460 (5)−0.3113 (3)−0.1488 (2)0.0213 (4)
H40.3575−0.4302−0.19710.026*
O50.30344 (4)−0.2577 (2)−0.0355 (2)0.0273 (4)
C50.33950 (5)−0.2038 (3)−0.0609 (2)0.0210 (4)
C60.34939 (5)−0.0292 (3)0.0138 (2)0.0194 (4)
C70.32098 (5)0.0712 (3)0.1075 (3)0.0208 (4)
H70.30070.12750.05240.025*
C80.32148 (5)0.0892 (3)0.2640 (3)0.0213 (4)
N90.34916 (5)−0.0003 (3)0.3624 (2)0.0275 (4)
C100.36272 (6)0.1427 (4)0.4797 (3)0.0343 (5)
H10A0.37520.25090.42390.041*
H10B0.38120.07930.54880.041*
C110.33104 (6)0.2257 (4)0.5823 (3)0.0323 (5)
H11A0.33540.19390.69460.039*
H11B0.33010.36900.57140.039*
C120.29427 (6)0.1356 (4)0.5273 (3)0.0312 (5)
H120.27280.18860.58830.037*
O130.26589 (4)0.2760 (3)0.2957 (2)0.0409 (4)
C130.29067 (5)0.1800 (3)0.3542 (3)0.0264 (4)
C140.29709 (7)−0.0863 (4)0.5442 (3)0.0414 (6)
H14A0.2742−0.14820.50400.050*
H14B0.2999−0.12140.65670.050*
C150.33094 (7)−0.1599 (4)0.4492 (3)0.0398 (6)
H15A0.3490−0.22020.52230.048*
H15B0.3228−0.26080.37360.048*
C160.39711 (5)0.2215 (3)0.0766 (2)0.0199 (4)
H160.37830.31450.09860.024*
C170.43187 (5)0.2647 (3)0.1187 (3)0.0206 (4)
H170.45020.17090.09330.025*
C180.44483 (5)0.4405 (3)0.1996 (2)0.0188 (4)
C190.42275 (5)0.6030 (3)0.2311 (2)0.0207 (4)
H190.39780.60410.19540.025*
C200.43624 (5)0.7628 (3)0.3131 (3)0.0207 (4)
H200.42070.87140.33320.025*
O210.48955 (3)0.9124 (2)0.4451 (2)0.0257 (3)
C210.47287 (5)0.7621 (3)0.3656 (2)0.0201 (4)
C220.49550 (5)0.6031 (3)0.3342 (2)0.0215 (4)
H220.52050.60300.36930.026*
C230.48175 (5)0.4451 (3)0.2520 (2)0.0205 (4)
H230.49750.33770.23050.025*
C240.29163 (6)−0.4419 (3)−0.0932 (3)0.0346 (6)
H24A0.2925−0.4419−0.20860.052*
H24B0.2662−0.4669−0.05830.052*
H24C0.3080−0.5437−0.05230.052*
C250.41767 (6)−0.5036 (3)−0.3349 (3)0.0248 (4)
H25A0.4101−0.6047−0.26010.037*
H25B0.4390−0.5497−0.39600.037*
H25C0.3971−0.4745−0.40640.037*
C260.46609 (6)1.0558 (3)0.5147 (3)0.0263 (4)
H26A0.45261.12510.43170.039*
H26B0.48121.14840.57470.039*
H26C0.44840.99230.58560.039*
U11U22U33U12U13U23
C10.0212 (9)0.0204 (9)0.0179 (9)0.0000 (7)−0.0011 (8)−0.0002 (8)
C20.0177 (8)0.0241 (9)0.0209 (10)−0.0021 (7)0.0001 (7)−0.0010 (8)
O30.0200 (6)0.0251 (7)0.0275 (8)−0.0008 (5)0.0031 (6)−0.0089 (6)
C30.0211 (9)0.0230 (9)0.0184 (10)0.0023 (7)0.0002 (8)−0.0020 (8)
C40.0218 (9)0.0199 (9)0.0222 (10)−0.0010 (7)−0.0013 (8)−0.0037 (8)
O50.0195 (6)0.0257 (7)0.0367 (9)−0.0073 (6)0.0054 (6)−0.0102 (7)
C50.0186 (8)0.0233 (9)0.0210 (10)−0.0021 (7)−0.0002 (8)−0.0020 (8)
C60.0197 (9)0.0202 (9)0.0185 (9)−0.0008 (7)−0.0008 (7)−0.0007 (8)
C70.0184 (8)0.0192 (9)0.0247 (10)−0.0001 (7)−0.0029 (8)−0.0018 (9)
C80.0169 (8)0.0207 (9)0.0261 (10)0.0024 (7)−0.0010 (8)−0.0039 (8)
N90.0258 (8)0.0354 (10)0.0213 (8)0.0083 (8)−0.0045 (8)−0.0037 (8)
C100.0235 (10)0.0549 (15)0.0245 (11)0.0018 (10)−0.0039 (9)−0.0091 (11)
C110.0255 (10)0.0474 (13)0.0242 (11)0.0016 (9)−0.0036 (9)−0.0080 (11)
C120.0187 (9)0.0482 (13)0.0268 (11)0.0008 (9)0.0011 (8)−0.0106 (11)
O130.0304 (8)0.0562 (11)0.0363 (9)0.0215 (8)−0.0095 (7)−0.0178 (9)
C130.0197 (9)0.0300 (10)0.0296 (11)0.0041 (8)−0.0040 (9)−0.0113 (10)
C140.0387 (12)0.0516 (15)0.0338 (13)−0.0093 (11)0.0032 (11)0.0046 (12)
C150.0522 (14)0.0343 (12)0.0329 (13)0.0067 (11)−0.0044 (12)0.0053 (11)
C160.0214 (9)0.0202 (9)0.0182 (9)−0.0004 (7)0.0014 (8)−0.0013 (8)
C170.0199 (8)0.0204 (9)0.0214 (10)0.0002 (7)0.0004 (8)−0.0002 (8)
C180.0188 (8)0.0201 (9)0.0174 (9)−0.0023 (7)0.0019 (7)−0.0007 (8)
C190.0196 (8)0.0226 (10)0.0199 (10)−0.0015 (7)−0.0019 (7)0.0003 (8)
C200.0202 (8)0.0198 (9)0.0221 (10)0.0020 (7)0.0003 (8)−0.0011 (8)
O210.0209 (6)0.0221 (7)0.0342 (8)−0.0006 (5)−0.0030 (6)−0.0099 (7)
C210.0216 (9)0.0193 (9)0.0193 (9)−0.0041 (7)−0.0008 (8)−0.0027 (8)
C220.0173 (8)0.0241 (9)0.0230 (10)−0.0013 (7)−0.0013 (8)0.0001 (9)
C230.0192 (8)0.0203 (9)0.0220 (9)0.0008 (7)0.0015 (8)−0.0020 (8)
C240.0294 (10)0.0271 (11)0.0473 (15)−0.0112 (8)0.0071 (10)−0.0119 (11)
C250.0264 (9)0.0228 (10)0.0251 (11)0.0009 (8)−0.0007 (9)−0.0072 (9)
C260.0291 (10)0.0222 (10)0.0275 (11)0.0026 (8)−0.0022 (9)−0.0069 (9)
C1—C21.403 (3)C14—C151.549 (4)
C1—C61.411 (3)C14—H14A0.9900
C1—C161.472 (3)C14—H14B0.9900
C2—C31.391 (3)C15—H15A0.9900
C2—H20.9500C15—H15B0.9900
O3—C31.371 (2)C16—C171.338 (3)
O3—C251.431 (2)C16—H160.9500
C3—C41.400 (3)C17—C181.466 (3)
C4—C51.387 (3)C17—H170.9500
C4—H40.9500C18—C191.398 (3)
O5—C51.371 (2)C18—C231.405 (3)
O5—C241.422 (2)C19—C201.388 (3)
C5—C61.403 (3)C19—H190.9500
C6—C71.470 (3)C20—C211.395 (3)
C7—C81.333 (3)C20—H200.9500
C7—H70.9500O21—C211.373 (2)
C8—N91.440 (3)O21—C261.428 (2)
C8—C131.488 (3)C21—C221.391 (3)
N9—C151.476 (3)C22—C231.383 (3)
N9—C101.482 (3)C22—H220.9500
C10—C111.546 (3)C23—H230.9500
C10—H10A0.9900C24—H24A0.9800
C10—H10B0.9900C24—H24B0.9800
C11—C121.538 (3)C24—H24C0.9800
C11—H11A0.9900C25—H25A0.9800
C11—H11B0.9900C25—H25B0.9800
C12—C131.505 (3)C25—H25C0.9800
C12—C141.536 (4)C26—H26A0.9800
C12—H121.0000C26—H26B0.9800
O13—C131.217 (3)C26—H26C0.9800
C2—C1—C6119.32 (18)C12—C14—H14B109.8
C2—C1—C16120.87 (16)C15—C14—H14B109.8
C6—C1—C16119.81 (17)H14A—C14—H14B108.3
C3—C2—C1120.27 (17)N9—C15—C14111.6 (2)
C3—C2—H2119.9N9—C15—H15A109.3
C1—C2—H2119.9C14—C15—H15A109.3
C3—O3—C25117.78 (15)N9—C15—H15B109.3
O3—C3—C2115.32 (16)C14—C15—H15B109.3
O3—C3—C4123.48 (17)H15A—C15—H15B108.0
C2—C3—C4121.20 (17)C17—C16—C1124.32 (17)
C5—C4—C3118.17 (17)C17—C16—H16117.8
C5—C4—H4120.9C1—C16—H16117.8
C3—C4—H4120.9C16—C17—C18127.40 (17)
C5—O5—C24118.14 (16)C16—C17—H17116.3
O5—C5—C4124.11 (17)C18—C17—H17116.3
O5—C5—C6113.72 (17)C19—C18—C23117.55 (17)
C4—C5—C6122.16 (17)C19—C18—C17124.46 (16)
C5—C6—C1118.86 (17)C23—C18—C17117.98 (16)
C5—C6—C7117.92 (16)C20—C19—C18121.85 (17)
C1—C6—C7123.20 (18)C20—C19—H19119.1
C8—C7—C6124.95 (19)C18—C19—H19119.1
C8—C7—H7117.5C19—C20—C21119.34 (18)
C6—C7—H7117.5C19—C20—H20120.3
C7—C8—N9123.15 (19)C21—C20—H20120.3
C7—C8—C13122.75 (19)C21—O21—C26117.55 (14)
N9—C8—C13113.58 (18)O21—C21—C22115.33 (16)
C8—N9—C15107.31 (17)O21—C21—C20124.75 (17)
C8—N9—C10109.56 (17)C22—C21—C20119.89 (17)
C15—N9—C10107.79 (18)C23—C22—C21120.20 (17)
N9—C10—C11112.23 (17)C23—C22—H22119.9
N9—C10—H10A109.2C21—C22—H22119.9
C11—C10—H10A109.2C22—C23—C18121.16 (18)
N9—C10—H10B109.2C22—C23—H23119.4
C11—C10—H10B109.2C18—C23—H23119.4
H10A—C10—H10B107.9O5—C24—H24A109.5
C12—C11—C10108.62 (18)O5—C24—H24B109.5
C12—C11—H11A110.0H24A—C24—H24B109.5
C10—C11—H11A110.0O5—C24—H24C109.5
C12—C11—H11B110.0H24A—C24—H24C109.5
C10—C11—H11B110.0H24B—C24—H24C109.5
H11A—C11—H11B108.3O3—C25—H25A109.5
C13—C12—C14107.4 (2)O3—C25—H25B109.5
C13—C12—C11106.79 (19)H25A—C25—H25B109.5
C14—C12—C11108.32 (19)O3—C25—H25C109.5
C13—C12—H12111.4H25A—C25—H25C109.5
C14—C12—H12111.4H25B—C25—H25C109.5
C11—C12—H12111.4O21—C26—H26A109.5
O13—C13—C8124.6 (2)O21—C26—H26B109.5
O13—C13—C12124.8 (2)H26A—C26—H26B109.5
C8—C13—C12110.61 (18)O21—C26—H26C109.5
C12—C14—C15109.2 (2)H26A—C26—H26C109.5
C12—C14—H14A109.8H26B—C26—H26C109.5
C15—C14—H14A109.8
C6—C1—C2—C3−1.2 (3)C10—C11—C12—C1459.0 (3)
C16—C1—C2—C3179.23 (18)C7—C8—C13—O13−13.8 (3)
C25—O3—C3—C2−176.17 (18)N9—C8—C13—O13174.2 (2)
C25—O3—C3—C43.3 (3)C7—C8—C13—C12165.8 (2)
C1—C2—C3—O3179.94 (18)N9—C8—C13—C12−6.2 (3)
C1—C2—C3—C40.5 (3)C14—C12—C13—O13125.5 (2)
O3—C3—C4—C5−178.81 (19)C11—C12—C13—O13−118.5 (2)
C2—C3—C4—C50.6 (3)C14—C12—C13—C8−54.1 (2)
C24—O5—C5—C44.7 (3)C11—C12—C13—C861.9 (2)
C24—O5—C5—C6−174.0 (2)C13—C12—C14—C1558.5 (3)
C3—C4—C5—O5−179.51 (19)C11—C12—C14—C15−56.5 (3)
C3—C4—C5—C6−1.0 (3)C8—N9—C15—C14−56.1 (3)
O5—C5—C6—C1178.92 (18)C10—N9—C15—C1461.8 (2)
C4—C5—C6—C10.2 (3)C12—C14—C15—N9−3.7 (3)
O5—C5—C6—C70.2 (3)C2—C1—C16—C17−25.6 (3)
C4—C5—C6—C7−178.45 (19)C6—C1—C16—C17154.9 (2)
C2—C1—C6—C50.9 (3)C1—C16—C17—C18−178.61 (19)
C16—C1—C6—C5−179.58 (18)C16—C17—C18—C19−7.2 (3)
C2—C1—C6—C7179.48 (19)C16—C17—C18—C23171.5 (2)
C16—C1—C6—C7−1.0 (3)C23—C18—C19—C20−0.9 (3)
C5—C6—C7—C8111.4 (2)C17—C18—C19—C20177.7 (2)
C1—C6—C7—C8−67.3 (3)C18—C19—C20—C210.1 (3)
C6—C7—C8—N9−4.3 (4)C26—O21—C21—C22−164.65 (18)
C6—C7—C8—C13−175.52 (18)C26—O21—C21—C2017.1 (3)
C7—C8—N9—C15−108.9 (2)C19—C20—C21—O21178.75 (19)
C13—C8—N9—C1563.0 (2)C19—C20—C21—C220.6 (3)
C7—C8—N9—C10134.3 (2)O21—C21—C22—C23−178.73 (18)
C13—C8—N9—C10−53.7 (2)C20—C21—C22—C23−0.4 (3)
C8—N9—C10—C1157.3 (2)C21—C22—C23—C18−0.5 (3)
C15—N9—C10—C11−59.2 (2)C19—C18—C23—C221.1 (3)
N9—C10—C11—C12−1.3 (3)C17—C18—C23—C22−177.61 (19)
C10—C11—C12—C13−56.4 (2)
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