| Literature DB >> 22412611 |
Narsimha Reddy Penthala, Sean Parkin, Peter A Crooks.
Abstract
In the title compound, C(20)H(18)N(2)O(3), the C=C bond of the acrylonitrile group that links the indole and the 3,4,5-trimeth-oxy-phenyl rings has Z geometry, with dihedral angles between the plane of the acrylonitrile unit and the planes of the benzene and indole ring systems of 21.96 (5) and 38.94 (7)°, respectively. The acrylonitrile group is planar (r.m.s. deviation from planarity = 0.037 Å). Mol-ecules are linked into head-to-tail chains that propagate along the b-axis direction by bifurcated N-H⋯O inter-molecular hydrogen bonds, which form an R(1) (2)(5) motif between the indole NH group and the two meth-oxy O atoms furthest from the nitrile group.Entities:
Year: 2012 PMID: 22412611 PMCID: PMC3295500 DOI: 10.1107/S1600536812005855
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H18N2O3 | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 9970 reflections |
| θ = 3.9–68.1° | |
| µ = 0.74 mm−1 | |
| β = 93.610 (2)° | Lath, yellow |
| 0.24 × 0.07 × 0.02 mm | |
| Bruker X8 Proteum diffractometer | 2979 independent reflections |
| Radiation source: fine-focus rotating anode | 2679 reflections with |
| Graded multilayer optics monochromator | |
| Detector resolution: 5.6 pixels mm-1 | θmax = 68.1°, θmin = 3.9° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 20812 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2979 reflections | Δρmax = 0.26 e Å−3 |
| 233 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0016 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.29609 (11) | 0.42543 (6) | 0.78546 (16) | 0.0203 (3) | |
| H1N | 0.2929 (15) | 0.4617 (8) | 0.732 (2) | 0.024* | |
| N2 | 0.68309 (12) | 0.37056 (6) | 0.89979 (17) | 0.0251 (3) | |
| O1 | 0.91232 (9) | 0.14011 (4) | 1.03760 (14) | 0.0220 (2) | |
| O2 | 0.79293 (9) | 0.03501 (4) | 0.91759 (13) | 0.0202 (2) | |
| O3 | 0.56732 (8) | 0.03817 (4) | 0.81372 (14) | 0.0203 (2) | |
| C1 | 0.38533 (13) | 0.38300 (6) | 0.77536 (19) | 0.0195 (3) | |
| H1 | 0.4520 | 0.3883 | 0.7009 | 0.023* | |
| C2 | 0.36515 (12) | 0.33101 (6) | 0.88911 (18) | 0.0177 (3) | |
| C3 | 0.25524 (12) | 0.34334 (6) | 0.97547 (18) | 0.0172 (3) | |
| C4 | 0.18967 (13) | 0.31113 (6) | 1.1088 (2) | 0.0206 (3) | |
| H4 | 0.2151 | 0.2712 | 1.1585 | 0.025* | |
| C5 | 0.08734 (14) | 0.33867 (7) | 1.1662 (2) | 0.0253 (3) | |
| H5 | 0.0426 | 0.3174 | 1.2574 | 0.030* | |
| C6 | 0.04772 (14) | 0.39732 (7) | 1.0932 (2) | 0.0266 (3) | |
| H6 | −0.0241 | 0.4145 | 1.1335 | 0.032* | |
| C7 | 0.11116 (13) | 0.43046 (7) | 0.9640 (2) | 0.0225 (3) | |
| H7 | 0.0850 | 0.4704 | 0.9153 | 0.027* | |
| C8 | 0.21522 (13) | 0.40300 (6) | 0.90769 (19) | 0.0188 (3) | |
| C9 | 0.43611 (12) | 0.27458 (6) | 0.91389 (18) | 0.0175 (3) | |
| H9 | 0.3947 | 0.2367 | 0.9389 | 0.021* | |
| C10 | 0.55447 (13) | 0.26926 (6) | 0.90571 (18) | 0.0170 (3) | |
| C11 | 0.61787 (12) | 0.20801 (6) | 0.91199 (18) | 0.0166 (3) | |
| C12 | 0.73704 (12) | 0.20546 (6) | 0.97301 (18) | 0.0173 (3) | |
| H12 | 0.7781 | 0.2431 | 1.0103 | 0.021* | |
| C13 | 0.79597 (12) | 0.14770 (6) | 0.97940 (18) | 0.0173 (3) | |
| C14 | 0.73641 (12) | 0.09257 (6) | 0.92416 (18) | 0.0166 (3) | |
| C15 | 0.61699 (12) | 0.09519 (6) | 0.86363 (18) | 0.0166 (3) | |
| C16 | 0.55781 (12) | 0.15264 (6) | 0.85555 (18) | 0.0163 (3) | |
| H16 | 0.4768 | 0.1544 | 0.8118 | 0.020* | |
| C17 | 0.62542 (13) | 0.32580 (6) | 0.89881 (18) | 0.0185 (3) | |
| C18 | 0.96763 (14) | 0.19066 (7) | 1.1428 (2) | 0.0263 (3) | |
| H18A | 0.9721 | 0.2277 | 1.0590 | 0.039* | |
| H18B | 1.0476 | 0.1780 | 1.1892 | 0.039* | |
| H18C | 0.9214 | 0.2012 | 1.2529 | 0.039* | |
| C19 | 0.84428 (13) | 0.01136 (7) | 1.0993 (2) | 0.0242 (3) | |
| H19A | 0.9256 | 0.0269 | 1.1196 | 0.036* | |
| H19B | 0.8445 | −0.0350 | 1.0971 | 0.036* | |
| H19C | 0.7976 | 0.0262 | 1.2042 | 0.036* | |
| C20 | 0.44638 (13) | 0.03775 (7) | 0.7438 (2) | 0.0227 (3) | |
| H20A | 0.3972 | 0.0538 | 0.8440 | 0.034* | |
| H20B | 0.4225 | −0.0056 | 0.7100 | 0.034* | |
| H20C | 0.4363 | 0.0648 | 0.6295 | 0.034* |
| N1 | 0.0269 (7) | 0.0156 (6) | 0.0183 (6) | 0.0011 (5) | −0.0004 (5) | 0.0033 (5) |
| N2 | 0.0311 (7) | 0.0229 (7) | 0.0218 (6) | −0.0038 (5) | 0.0048 (5) | −0.0011 (5) |
| O1 | 0.0174 (5) | 0.0210 (5) | 0.0270 (5) | −0.0010 (4) | −0.0031 (4) | −0.0036 (4) |
| O2 | 0.0221 (5) | 0.0176 (5) | 0.0202 (5) | 0.0035 (4) | −0.0040 (4) | −0.0021 (4) |
| O3 | 0.0198 (5) | 0.0160 (5) | 0.0245 (5) | −0.0015 (4) | −0.0042 (4) | −0.0019 (4) |
| C1 | 0.0237 (8) | 0.0196 (7) | 0.0153 (6) | 0.0002 (6) | 0.0008 (6) | 0.0000 (5) |
| C2 | 0.0222 (7) | 0.0176 (7) | 0.0131 (6) | −0.0018 (5) | −0.0017 (5) | −0.0013 (5) |
| C3 | 0.0196 (7) | 0.0160 (7) | 0.0153 (6) | −0.0018 (5) | −0.0030 (5) | −0.0031 (5) |
| C4 | 0.0240 (8) | 0.0172 (7) | 0.0205 (7) | −0.0027 (6) | −0.0007 (6) | −0.0008 (5) |
| C5 | 0.0271 (8) | 0.0232 (7) | 0.0262 (8) | −0.0059 (6) | 0.0074 (6) | −0.0054 (6) |
| C6 | 0.0227 (8) | 0.0252 (8) | 0.0320 (8) | −0.0002 (6) | 0.0034 (6) | −0.0095 (6) |
| C7 | 0.0230 (8) | 0.0181 (7) | 0.0257 (7) | 0.0025 (6) | −0.0046 (6) | −0.0054 (5) |
| C8 | 0.0223 (7) | 0.0169 (7) | 0.0167 (6) | −0.0014 (5) | −0.0030 (6) | −0.0027 (5) |
| C9 | 0.0241 (8) | 0.0166 (7) | 0.0118 (6) | −0.0017 (5) | 0.0006 (5) | −0.0002 (5) |
| C10 | 0.0238 (8) | 0.0174 (7) | 0.0098 (6) | −0.0011 (5) | 0.0007 (5) | 0.0003 (5) |
| C11 | 0.0225 (7) | 0.0182 (7) | 0.0095 (6) | 0.0004 (5) | 0.0035 (5) | 0.0014 (5) |
| C12 | 0.0214 (7) | 0.0173 (7) | 0.0133 (6) | −0.0028 (5) | 0.0014 (5) | −0.0006 (5) |
| C13 | 0.0184 (7) | 0.0220 (7) | 0.0116 (6) | −0.0010 (5) | 0.0005 (5) | 0.0007 (5) |
| C14 | 0.0206 (7) | 0.0166 (7) | 0.0125 (6) | 0.0020 (5) | 0.0005 (5) | −0.0003 (5) |
| C15 | 0.0218 (7) | 0.0169 (7) | 0.0110 (6) | −0.0023 (5) | 0.0007 (5) | −0.0004 (5) |
| C16 | 0.0178 (7) | 0.0195 (7) | 0.0115 (6) | 0.0011 (5) | −0.0001 (5) | 0.0010 (5) |
| C17 | 0.0230 (7) | 0.0202 (7) | 0.0124 (6) | 0.0035 (6) | 0.0024 (5) | −0.0006 (5) |
| C18 | 0.0250 (8) | 0.0240 (8) | 0.0288 (8) | −0.0042 (6) | −0.0060 (6) | −0.0033 (6) |
| C19 | 0.0243 (8) | 0.0216 (7) | 0.0257 (7) | 0.0022 (6) | −0.0062 (6) | 0.0033 (6) |
| C20 | 0.0201 (8) | 0.0210 (7) | 0.0261 (7) | −0.0018 (6) | −0.0050 (6) | −0.0013 (6) |
| N1—C1 | 1.3572 (19) | C7—H7 | 0.9500 |
| N1—C8 | 1.3737 (19) | C9—C10 | 1.351 (2) |
| N1—H1N | 0.851 (18) | C9—H9 | 0.9500 |
| N2—C17 | 1.1499 (19) | C10—C17 | 1.4433 (19) |
| O1—C13 | 1.3649 (17) | C10—C11 | 1.4801 (18) |
| O1—C18 | 1.4188 (17) | C11—C12 | 1.392 (2) |
| O2—C14 | 1.3773 (16) | C11—C16 | 1.3980 (19) |
| O2—C19 | 1.4472 (17) | C12—C13 | 1.3910 (19) |
| O3—C15 | 1.3661 (16) | C12—H12 | 0.9500 |
| O3—C20 | 1.4257 (17) | C13—C14 | 1.3890 (19) |
| C1—C2 | 1.3818 (19) | C14—C15 | 1.394 (2) |
| C1—H1 | 0.9500 | C15—C16 | 1.3868 (19) |
| C2—C3 | 1.4409 (19) | C16—H16 | 0.9500 |
| C2—C9 | 1.4430 (19) | C18—H18A | 0.9800 |
| C3—C4 | 1.4011 (19) | C18—H18B | 0.9800 |
| C3—C8 | 1.4113 (19) | C18—H18C | 0.9800 |
| C4—C5 | 1.380 (2) | C19—H19A | 0.9800 |
| C4—H4 | 0.9500 | C19—H19B | 0.9800 |
| C5—C6 | 1.403 (2) | C19—H19C | 0.9800 |
| C5—H5 | 0.9500 | C20—H20A | 0.9800 |
| C6—C7 | 1.377 (2) | C20—H20B | 0.9800 |
| C6—H6 | 0.9500 | C20—H20C | 0.9800 |
| C7—C8 | 1.393 (2) | ||
| C1—N1—C8 | 109.44 (12) | C12—C11—C10 | 120.23 (12) |
| C1—N1—H1N | 125.7 (11) | C16—C11—C10 | 119.80 (13) |
| C8—N1—H1N | 124.7 (11) | C13—C12—C11 | 119.93 (12) |
| C13—O1—C18 | 116.87 (11) | C13—C12—H12 | 120.0 |
| C14—O2—C19 | 116.02 (10) | C11—C12—H12 | 120.0 |
| C15—O3—C20 | 117.67 (11) | O1—C13—C14 | 115.30 (12) |
| N1—C1—C2 | 110.19 (12) | O1—C13—C12 | 124.47 (12) |
| N1—C1—H1 | 124.9 | C14—C13—C12 | 120.23 (13) |
| C2—C1—H1 | 124.9 | O2—C14—C13 | 122.10 (12) |
| C1—C2—C3 | 105.88 (12) | O2—C14—C15 | 118.06 (12) |
| C1—C2—C9 | 127.93 (13) | C13—C14—C15 | 119.76 (12) |
| C3—C2—C9 | 126.16 (12) | O3—C15—C16 | 124.87 (13) |
| C4—C3—C8 | 118.85 (13) | O3—C15—C14 | 114.77 (11) |
| C4—C3—C2 | 134.18 (13) | C16—C15—C14 | 120.36 (12) |
| C8—C3—C2 | 106.90 (12) | C15—C16—C11 | 119.73 (13) |
| C5—C4—C3 | 118.52 (13) | C15—C16—H16 | 120.1 |
| C5—C4—H4 | 120.7 | C11—C16—H16 | 120.1 |
| C3—C4—H4 | 120.7 | N2—C17—C10 | 177.68 (14) |
| C4—C5—C6 | 121.61 (13) | O1—C18—H18A | 109.5 |
| C4—C5—H5 | 119.2 | O1—C18—H18B | 109.5 |
| C6—C5—H5 | 119.2 | H18A—C18—H18B | 109.5 |
| C7—C6—C5 | 121.15 (14) | O1—C18—H18C | 109.5 |
| C7—C6—H6 | 119.4 | H18A—C18—H18C | 109.5 |
| C5—C6—H6 | 119.4 | H18B—C18—H18C | 109.5 |
| C6—C7—C8 | 117.25 (13) | O2—C19—H19A | 109.5 |
| C6—C7—H7 | 121.4 | O2—C19—H19B | 109.5 |
| C8—C7—H7 | 121.4 | H19A—C19—H19B | 109.5 |
| N1—C8—C7 | 129.82 (13) | O2—C19—H19C | 109.5 |
| N1—C8—C3 | 107.59 (12) | H19A—C19—H19C | 109.5 |
| C7—C8—C3 | 122.59 (13) | H19B—C19—H19C | 109.5 |
| C10—C9—C2 | 127.70 (13) | O3—C20—H20A | 109.5 |
| C10—C9—H9 | 116.1 | O3—C20—H20B | 109.5 |
| C2—C9—H9 | 116.1 | H20A—C20—H20B | 109.5 |
| C9—C10—C17 | 119.30 (12) | O3—C20—H20C | 109.5 |
| C9—C10—C11 | 123.60 (12) | H20A—C20—H20C | 109.5 |
| C17—C10—C11 | 117.04 (12) | H20B—C20—H20C | 109.5 |
| C12—C11—C16 | 119.97 (12) | ||
| C8—N1—C1—C2 | 0.67 (16) | C9—C10—C11—C16 | 23.89 (19) |
| N1—C1—C2—C3 | −0.36 (15) | C17—C10—C11—C16 | −158.85 (12) |
| N1—C1—C2—C9 | 177.84 (13) | C16—C11—C12—C13 | −0.58 (18) |
| C1—C2—C3—C4 | −176.92 (15) | C10—C11—C12—C13 | 179.70 (11) |
| C9—C2—C3—C4 | 4.8 (2) | C18—O1—C13—C14 | −163.42 (12) |
| C1—C2—C3—C8 | −0.07 (15) | C18—O1—C13—C12 | 16.64 (18) |
| C9—C2—C3—C8 | −178.31 (13) | C11—C12—C13—O1 | −179.74 (11) |
| C8—C3—C4—C5 | 1.0 (2) | C11—C12—C13—C14 | 0.32 (19) |
| C2—C3—C4—C5 | 177.59 (14) | C19—O2—C14—C13 | 62.90 (16) |
| C3—C4—C5—C6 | 0.6 (2) | C19—O2—C14—C15 | −120.39 (13) |
| C4—C5—C6—C7 | −1.5 (2) | O1—C13—C14—O2 | −3.80 (18) |
| C5—C6—C7—C8 | 0.7 (2) | C12—C13—C14—O2 | 176.14 (11) |
| C1—N1—C8—C7 | 179.00 (14) | O1—C13—C14—C15 | 179.55 (11) |
| C1—N1—C8—C3 | −0.69 (15) | C12—C13—C14—C15 | −0.51 (19) |
| C6—C7—C8—N1 | −178.69 (14) | C20—O3—C15—C16 | 1.54 (18) |
| C6—C7—C8—C3 | 1.0 (2) | C20—O3—C15—C14 | −177.79 (11) |
| C4—C3—C8—N1 | 177.88 (12) | O2—C14—C15—O3 | 3.54 (17) |
| C2—C3—C8—N1 | 0.46 (15) | C13—C14—C15—O3 | −179.67 (11) |
| C4—C3—C8—C7 | −1.8 (2) | O2—C14—C15—C16 | −175.82 (11) |
| C2—C3—C8—C7 | −179.26 (13) | C13—C14—C15—C16 | 0.97 (19) |
| C1—C2—C9—C10 | 31.1 (2) | O3—C15—C16—C11 | 179.48 (11) |
| C3—C2—C9—C10 | −151.04 (14) | C14—C15—C16—C11 | −1.22 (18) |
| C2—C9—C10—C17 | 9.7 (2) | C12—C11—C16—C15 | 1.03 (18) |
| C2—C9—C10—C11 | −173.07 (12) | C10—C11—C16—C15 | −179.25 (11) |
| C9—C10—C11—C12 | −156.39 (13) | C9—C10—C17—N2 | 103 (4) |
| C17—C10—C11—C12 | 20.87 (17) | C11—C10—C17—N2 | −74 (4) |
| H··· | ||||
| N1—H1 | 0.851 (18) | 2.075 (18) | 2.8635 (15) | 153.8 (16) |
| N1—H1 | 0.851 (18) | 2.301 (17) | 2.9476 (15) | 133.0 (15) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1N⋯O2i | 0.851 (18) | 2.075 (18) | 2.8635 (15) | 153.8 (16) |
| N1—H1N⋯O3i | 0.851 (18) | 2.301 (17) | 2.9476 (15) | 133.0 (15) |
Symmetry code: (i) .