Literature DB >> 22412596

Dimethyl 6-bromo-2-methyl-1,2-di-hydro-quinoline-2,4-dicarboxyl-ate.

Zeynep Gültekin, Michael Bolte, Tuncer Hökelek.   

Abstract

In the title compound, C(14)H(14)BrNO(4), the dihydro-pyridine ring adopts a screw-boat conformation. In the crystal, pairs of N-H⋯O hydrogen bonds link the mol-ecules into inversion R(2) (2)(10) dimers.

Entities:  

Year:  2012        PMID: 22412596      PMCID: PMC3295485          DOI: 10.1107/S1600536812005600

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of 1,2-dihydro­quinolines, see: Hu et al. (2011 ▶); Yadav et al. (2007 ▶, 2008 ▶); Waldmann et al. (2008 ▶); Zhang & Ji (2011 ▶). For the biological activity of dihydro­quinolines, see: Craig & Pearson (1971 ▶); Muren & Weissman (1971 ▶); Hamann et al. (1998 ▶); He et al. (2003 ▶); LaMontagne et al. (1989 ▶). For related structures, see: Gültekin et al. (2010 ▶, 2011 ▶, 2012 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For ring-puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C14H14BrNO4 M = 340.16 Triclinic, a = 7.8273 (9) Å b = 10.4827 (11) Å c = 10.5029 (12) Å α = 115.837 (9)° β = 105.655 (9)° γ = 96.889 (8)° V = 718.25 (17) Å3 Z = 2 Mo Kα radiation μ = 2.87 mm−1 T = 173 K 0.33 × 0.32 × 0.22 mm

Data collection

Stoe IPDS II two-circle diffractometer Absorption correction: multi-scan (MULABS; Spek, 2009 ▶; Blessing, 1995 ▶) T min = 0.451, T max = 0.571 7423 measured reflections 2692 independent reflections 2267 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.153 S = 1.21 2692 reflections 189 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.96 e Å−3 Δρmin = −0.46 e Å−3 Data collection: X-AREA (Stoe & Cie, 2001 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2001 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812005600/xu5465sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812005600/xu5465Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812005600/xu5465Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H14BrNO4Z = 2
Mr = 340.16F(000) = 344
Triclinic, P1Dx = 1.573 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.8273 (9) ÅCell parameters from 6851 reflections
b = 10.4827 (11) Åθ = 3.5–25.9°
c = 10.5029 (12) ŵ = 2.87 mm1
α = 115.837 (9)°T = 173 K
β = 105.655 (9)°Block, yellow
γ = 96.889 (8)°0.33 × 0.32 × 0.22 mm
V = 718.25 (17) Å3
Stoe IPDS II two-circle diffractometer2692 independent reflections
Radiation source: fine-focus sealed tube2267 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
ω scansθmax = 25.6°, θmin = 3.5°
Absorption correction: multi-scan (MULABS; Spek, 2009; Blessing, 1995)h = −9→9
Tmin = 0.451, Tmax = 0.571k = −12→12
7423 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.053H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.153w = 1/[σ2(Fo2) + (0.0648P)2 + 1.4243P] where P = (Fo2 + 2Fc2)/3
S = 1.21(Δ/σ)max < 0.001
2692 reflectionsΔρmax = 0.96 e Å3
189 parametersΔρmin = −0.46 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.038 (5)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.98733 (9)0.36331 (7)0.80285 (6)0.0521 (3)
O10.3080 (4)0.0758 (4)0.0556 (4)0.0340 (8)
O20.2146 (4)0.2722 (4)0.0660 (4)0.0309 (7)
O30.7138 (6)0.6908 (4)0.6183 (4)0.0453 (9)
O40.6368 (5)0.7295 (4)0.4208 (4)0.0400 (8)
N10.6748 (5)0.2278 (4)0.1501 (4)0.0280 (8)
H10.678 (13)0.138 (5)0.085 (9)0.11 (3)*
C20.5298 (6)0.2890 (5)0.1017 (5)0.0262 (9)
C30.5671 (6)0.4450 (5)0.2227 (5)0.0256 (9)
H30.52450.51160.19500.031*
C40.6599 (6)0.4919 (5)0.3699 (5)0.0249 (9)
C50.8118 (6)0.4208 (5)0.5664 (5)0.0308 (10)
H50.80930.50730.64510.037*
C60.8886 (6)0.3213 (6)0.5976 (5)0.0326 (10)
C70.8965 (7)0.1930 (6)0.4853 (6)0.0368 (11)
H70.95160.12880.50960.044*
C80.8212 (6)0.1596 (5)0.3345 (5)0.0305 (10)
H80.82430.07200.25770.037*
C90.7412 (5)0.2573 (5)0.2986 (5)0.0239 (9)
C100.7378 (6)0.3919 (5)0.4170 (5)0.0237 (9)
C110.5237 (7)0.2779 (6)−0.0504 (5)0.0374 (11)
H11A0.50220.1767−0.12360.056*
H11B0.63930.3348−0.03690.056*
H11C0.42600.3153−0.08560.056*
C120.3391 (6)0.1982 (5)0.0735 (5)0.0250 (9)
C130.0293 (6)0.1986 (6)0.0410 (6)0.0375 (11)
H13A−0.04410.26720.05600.056*
H13B0.03540.16230.11130.056*
H13C−0.02560.1177−0.06080.056*
C140.6766 (6)0.6451 (5)0.4849 (5)0.0296 (10)
C150.6353 (10)0.8756 (7)0.5235 (8)0.0572 (16)
H15A0.60720.92870.46920.086*
H15B0.75430.92660.60290.086*
H15C0.54340.86860.56680.086*
U11U22U33U12U13U23
Br10.0640 (4)0.0637 (5)0.0362 (3)0.0183 (3)0.0110 (3)0.0345 (3)
O10.0334 (17)0.0248 (17)0.0434 (19)0.0079 (14)0.0182 (14)0.0139 (15)
O20.0225 (15)0.0373 (18)0.0417 (18)0.0120 (13)0.0114 (13)0.0257 (15)
O30.060 (2)0.035 (2)0.0338 (19)0.0175 (18)0.0171 (17)0.0102 (16)
O40.054 (2)0.0290 (18)0.050 (2)0.0216 (16)0.0250 (18)0.0240 (16)
N10.0270 (19)0.032 (2)0.0267 (18)0.0135 (16)0.0107 (15)0.0142 (17)
C20.024 (2)0.033 (2)0.026 (2)0.0108 (18)0.0100 (17)0.0169 (19)
C30.022 (2)0.029 (2)0.033 (2)0.0087 (17)0.0116 (17)0.0196 (19)
C40.024 (2)0.027 (2)0.031 (2)0.0083 (17)0.0130 (17)0.0186 (19)
C50.033 (2)0.034 (3)0.029 (2)0.010 (2)0.0124 (18)0.018 (2)
C60.033 (2)0.041 (3)0.031 (2)0.009 (2)0.0105 (19)0.025 (2)
C70.032 (2)0.046 (3)0.048 (3)0.016 (2)0.015 (2)0.035 (3)
C80.029 (2)0.030 (2)0.036 (2)0.0144 (19)0.0129 (19)0.016 (2)
C90.0187 (19)0.030 (2)0.029 (2)0.0077 (17)0.0115 (16)0.0171 (18)
C100.023 (2)0.025 (2)0.028 (2)0.0072 (17)0.0108 (16)0.0157 (18)
C110.037 (3)0.050 (3)0.032 (2)0.014 (2)0.015 (2)0.024 (2)
C120.025 (2)0.030 (2)0.0205 (19)0.0074 (18)0.0099 (16)0.0120 (17)
C130.022 (2)0.047 (3)0.050 (3)0.007 (2)0.011 (2)0.030 (3)
C140.026 (2)0.030 (2)0.038 (3)0.0093 (18)0.0155 (19)0.019 (2)
C150.073 (4)0.034 (3)0.079 (4)0.031 (3)0.040 (4)0.029 (3)
Br1—C61.905 (5)C8—H80.9300
O2—C131.455 (5)C9—C81.395 (6)
O4—C151.442 (7)C10—C51.393 (6)
N1—C21.452 (6)C10—C91.427 (6)
N1—C91.380 (6)C11—H11A0.9600
N1—H10.899 (10)C11—H11B0.9600
C2—C31.499 (6)C11—H11C0.9600
C2—C111.537 (6)C12—O11.197 (6)
C2—C121.548 (6)C12—O21.322 (5)
C3—C41.344 (6)C13—H13A0.9600
C3—H30.9300C13—H13B0.9600
C4—C101.469 (6)C13—H13C0.9600
C4—C141.493 (6)C14—O31.200 (6)
C5—H50.9300C14—O41.344 (6)
C6—C51.378 (7)C15—H15A0.9600
C7—C61.371 (8)C15—H15B0.9600
C7—H70.9300C15—H15C0.9600
C8—C71.393 (7)
C12—O2—C13116.0 (4)N1—C9—C10120.0 (4)
C14—O4—C15114.8 (4)C8—C9—C10119.7 (4)
C2—N1—H1119 (6)C5—C10—C4125.1 (4)
C9—N1—C2120.0 (4)C5—C10—C9118.7 (4)
C9—N1—H1112 (6)C9—C10—C4116.2 (4)
N1—C2—C3109.0 (3)C2—C11—H11A109.5
N1—C2—C11108.4 (4)C2—C11—H11B109.5
N1—C2—C12110.7 (4)C2—C11—H11C109.5
C3—C2—C11112.4 (4)H11A—C11—H11B109.5
C3—C2—C12109.3 (4)H11A—C11—H11C109.5
C11—C2—C12107.0 (3)H11B—C11—H11C109.5
C2—C3—H3118.8O1—C12—O2124.9 (4)
C4—C3—C2122.3 (4)O1—C12—C2124.3 (4)
C4—C3—H3118.8O2—C12—C2110.7 (4)
C3—C4—C10120.3 (4)O2—C13—H13A109.5
C3—C4—C14119.0 (4)O2—C13—H13B109.5
C10—C4—C14120.7 (4)O2—C13—H13C109.5
C6—C5—C10120.0 (4)H13A—C13—H13B109.5
C6—C5—H5120.0H13A—C13—H13C109.5
C10—C5—H5120.0H13B—C13—H13C109.5
C5—C6—Br1119.1 (4)O3—C14—O4121.9 (5)
C7—C6—Br1119.0 (4)O3—C14—C4126.2 (4)
C7—C6—C5122.0 (4)O4—C14—C4111.8 (4)
C6—C7—C8119.5 (4)O4—C15—H15A109.5
C6—C7—H7120.2O4—C15—H15B109.5
C8—C7—H7120.2O4—C15—H15C109.5
C7—C8—C9120.1 (4)H15A—C15—H15B109.5
C7—C8—H8120.0H15A—C15—H15C109.5
C9—C8—H8120.0H15B—C15—H15C109.5
N1—C9—C8120.1 (4)
C9—N1—C2—C340.9 (5)C3—C4—C14—O4−16.6 (6)
C9—N1—C2—C11163.5 (4)C10—C4—C14—O3−17.1 (7)
C9—N1—C2—C12−79.4 (5)C10—C4—C14—O4165.6 (4)
C2—N1—C9—C8154.6 (4)Br1—C6—C5—C10−179.6 (3)
C2—N1—C9—C10−29.0 (6)C7—C6—C5—C100.5 (7)
N1—C2—C3—C4−28.2 (6)C8—C7—C6—Br1178.6 (4)
C11—C2—C3—C4−148.4 (4)C8—C7—C6—C5−1.5 (7)
C12—C2—C3—C492.9 (5)C9—C8—C7—C61.0 (7)
N1—C2—C12—O1−17.8 (6)N1—C9—C8—C7176.8 (4)
N1—C2—C12—O2164.7 (3)C10—C9—C8—C70.4 (7)
C3—C2—C12—O1−137.9 (4)C4—C10—C5—C6−177.1 (4)
C3—C2—C12—O244.6 (4)C9—C10—C5—C60.9 (6)
C11—C2—C12—O1100.1 (5)C4—C10—C9—N10.4 (6)
C11—C2—C12—O2−77.4 (4)C4—C10—C9—C8176.9 (4)
C2—C3—C4—C103.3 (6)C5—C10—C9—N1−177.8 (4)
C2—C3—C4—C14−174.5 (4)C5—C10—C9—C8−1.3 (6)
C3—C4—C10—C5−169.9 (4)O1—C12—O2—C133.0 (6)
C3—C4—C10—C912.0 (6)C2—C12—O2—C13−179.5 (4)
C14—C4—C10—C57.9 (7)O3—C14—O4—C15−2.4 (7)
C14—C4—C10—C9−170.2 (4)C4—C14—O4—C15175.1 (4)
C3—C4—C14—O3160.7 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.90 (8)2.12 (8)3.013 (6)176 (7)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.90 (8)2.12 (8)3.013 (6)176 (7)

Symmetry code: (i) .

  14 in total

1.  Antimalarials. 16. Synthesis of 2-substituted analogues of 8-[(4-amino-1-methylbutyl)amino]-6-methoxy-4-methyl-5-[3- (trifluoromethyl)phenoxy]quinoline as candidate antimalarials.

Authors:  M P LaMontagne; P Blumbergs; D C Smith
Journal:  J Med Chem       Date:  1989-08       Impact factor: 7.446

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and biological activity of a novel series of nonsteroidal, peripherally selective androgen receptor antagonists derived from 1,2-dihydropyridono[5,6-g]quinolines.

Authors:  L G Hamann; R I Higuchi; L Zhi; J P Edwards; X N Wang; K B Marschke; J W Kong; L J Farmer; T K Jones
Journal:  J Med Chem       Date:  1998-02-12       Impact factor: 7.446

4.  Potential antimalarials. 7. Tribromomethylquinolines and positive halogen compounds.

Authors:  J C Craig; D E Pearson
Journal:  J Med Chem       Date:  1971-12       Impact factor: 7.446

5.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

6.  Design of antineoplastic agents based on the '2-phenylnaphthalene-type' structural pattern--synthesis and biological activity studies of 11H-indolo[3.2-c]quinoline derivatives.

Authors:  Ling He; He-Xi Chang; Ting-Chao Chou; Niramol Savaraj; C C Cheng
Journal:  Eur J Med Chem       Date:  2003-01       Impact factor: 6.514

7.  Dimethyl 2-methyl-1,2-dihydro-quinoline-2,4-dicarboxyl-ate.

Authors:  Zeynep Gültekin; Wolfgang Frey; Barış Tercan; Tuncer Hökelek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-19

8.  Dimethyl 2,6,8-trimethyl-1,2-dihydroquinoline-2,4-dicarboxylate.

Authors:  Zeynep Gültekin; Wolfgang Frey; Barış Tercan; Tuncer Hökelek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-23

9.  Dimethyl 6-acetyl-2-methyl-1,2-dihydroquinoline-2,4-dicarboxyl-ate.

Authors:  Zeynep Gültekin; Michael Bolte; Tuncer Hökelek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-04

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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  1 in total

1.  Dimethyl 6-iodo-2-methyl-1,2-di-hydro-quinoline-2,4-di-carboxyl-ate.

Authors:  Zeynep Gültekin; Wolfgang Frey; Tuncer Hökelek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-31
  1 in total

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