Literature DB >> 22412574

2-Chloro-4-{(E)-[(4-chloro-phen-yl)imino]-meth-yl}phenol.

Zarife Sibel Sahin1, Samil Işık.   

Abstract

In the title Schiff base compound, C(13)H(9)Cl(2)NO, the dihedral angle between the mean planes of the benzene rings is 10.20 (10)°. The crystal structure is stabilized by O-H⋯N hydrogen bonds and weak π-π stacking inter-actions [centroid-centroid distance = 3.757 (1) Å].

Entities:  

Year:  2012        PMID: 22412574      PMCID: PMC3295463          DOI: 10.1107/S1600536812005193

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For Schiff bases related to coordination chemistry, see: Calligaris et al. (1972 ▶); Cozzi (2004 ▶); Curini et al. (2002 ▶). For the anti­bacterial, anti­cancer, anti­inflammatory and antitoxic properties, see: Williams (1972 ▶); Karia & Parsania (1999 ▶); Desai et al. (2001 ▶). For the industrial and biological properties of Schiff bases, see: Lozier et al. (1975 ▶); Aydogan et al. (2001 ▶). For structural studies of Schiff bases, see: Gül et al. (2007 ▶); Şahin et al. (2005 ▶); Şahin, Ağar et al. (2009 ▶); Şahin, Erşahin et al. (2009 ▶); Şahin, Işık et al. (2009 ▶). For the classification of hydrogen-bonding patterns, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C13H9Cl2NO M = 266.11 Orthorhombic, a = 9.7438 (6) Å b = 9.9953 (5) Å c = 12.1342 (6) Å V = 1181.78 (11) Å3 Z = 4 Mo Kα radiation μ = 0.53 mm−1 T = 296 K 0.42 × 0.34 × 0.24 mm

Data collection

Stoe IPDS II diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.807, T max = 0.901 11473 measured reflections 2325 independent reflections 1960 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.064 S = 0.96 2325 reflections 154 parameters H-atom parameters constrained Δρmax = 0.12 e Å−3 Δρmin = −0.17 e Å−3 Absolute structure: Flack (1983 ▶), 968 Friedel pairs Flack parameter: 0.02 (6) Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812005193/jj2120sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812005193/jj2120Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812005193/jj2120Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H9Cl2NOF(000) = 544
Mr = 266.11Dx = 1.496 Mg m3
Orthorhombic, P21212Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2 2abCell parameters from 20026 reflections
a = 9.7438 (6) Åθ = 1.7–27.3°
b = 9.9953 (5) ŵ = 0.53 mm1
c = 12.1342 (6) ÅT = 296 K
V = 1181.78 (11) Å3Prism, yellow
Z = 40.42 × 0.34 × 0.24 mm
Stoe IPDS II diffractometer2325 independent reflections
Radiation source: fine-focus sealed tube1960 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.049
Detector resolution: 6.67 pixels mm-1θmax = 26.0°, θmin = 1.7°
ω scansh = −11→12
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −12→12
Tmin = 0.807, Tmax = 0.901l = −14→14
11473 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031H-atom parameters constrained
wR(F2) = 0.064w = 1/[σ2(Fo2) + (0.0363P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max = 0.003
2325 reflectionsΔρmax = 0.12 e Å3
154 parametersΔρmin = −0.17 e Å3
0 restraintsAbsolute structure: Flack (1983), 968 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.02 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.02767 (6)0.22741 (7)0.73432 (4)0.06816 (19)
Cl20.78712 (7)1.02829 (7)0.54617 (5)0.0792 (2)
O10.01370 (14)0.20491 (15)0.96945 (11)0.0596 (4)
H10.03070.19831.03540.089*
N10.42961 (15)0.66841 (17)0.80818 (13)0.0474 (4)
C120.25372 (18)0.4980 (2)0.82414 (15)0.0491 (5)
C90.09145 (18)0.3021 (2)0.92525 (15)0.0475 (5)
C110.16101 (18)0.4218 (2)0.76339 (16)0.0532 (5)
H110.15280.43650.68800.064*
C60.6818 (2)0.9216 (2)0.62138 (17)0.0562 (5)
C80.1838 (2)0.3779 (2)0.98593 (16)0.0568 (5)
H80.19240.36311.06130.068*
C130.33844 (19)0.5943 (2)0.76529 (17)0.0541 (5)
H130.32450.60220.68970.065*
C10.68403 (19)0.9260 (2)0.73602 (17)0.0562 (5)
H1A0.74170.98500.77300.067*
C100.08170 (19)0.3259 (2)0.81251 (15)0.0487 (5)
C20.5999 (2)0.8419 (2)0.79293 (17)0.0596 (6)
H20.60140.84420.86950.072*
C40.5127 (2)0.7514 (2)0.62570 (17)0.0675 (6)
H40.45520.69250.58850.081*
C50.5955 (2)0.8342 (2)0.56650 (18)0.0685 (6)
H50.59400.83200.48990.082*
C70.2623 (2)0.4739 (2)0.93676 (16)0.0527 (5)
H70.32270.52410.97940.063*
C30.51177 (17)0.75259 (19)0.74034 (15)0.0469 (4)
U11U22U33U12U13U23
Cl10.0696 (3)0.0808 (4)0.0541 (3)−0.0187 (3)−0.0139 (2)−0.0002 (3)
Cl20.0909 (4)0.0874 (4)0.0592 (3)−0.0312 (3)0.0115 (3)0.0010 (3)
O10.0660 (8)0.0659 (9)0.0468 (7)−0.0123 (7)0.0010 (6)0.0061 (7)
N10.0488 (9)0.0486 (10)0.0448 (9)0.0033 (8)0.0035 (7)0.0006 (8)
C120.0462 (10)0.0534 (12)0.0477 (11)0.0029 (9)0.0022 (8)0.0021 (9)
C90.0450 (9)0.0526 (12)0.0447 (10)−0.0002 (9)0.0026 (8)0.0009 (9)
C110.0550 (10)0.0667 (13)0.0379 (10)−0.0020 (10)−0.0040 (9)0.0050 (10)
C60.0606 (12)0.0551 (13)0.0528 (12)−0.0015 (11)0.0068 (9)−0.0004 (10)
C80.0636 (12)0.0680 (14)0.0387 (11)−0.0075 (11)−0.0017 (9)0.0044 (9)
C130.0536 (11)0.0650 (13)0.0438 (11)0.0004 (10)−0.0004 (9)0.0027 (10)
C10.0545 (11)0.0591 (13)0.0549 (12)−0.0096 (10)−0.0027 (10)−0.0073 (10)
C100.0464 (10)0.0563 (13)0.0433 (10)0.0008 (9)−0.0038 (8)−0.0006 (9)
C20.0635 (12)0.0741 (16)0.0413 (11)−0.0017 (12)−0.0010 (9)−0.0027 (10)
C40.0827 (14)0.0689 (16)0.0510 (12)−0.0199 (13)−0.0014 (11)−0.0100 (12)
C50.0920 (15)0.0728 (16)0.0406 (11)−0.0281 (13)0.0017 (11)−0.0082 (11)
C70.0552 (10)0.0596 (13)0.0432 (10)−0.0070 (10)−0.0054 (9)−0.0026 (10)
C30.0482 (9)0.0446 (11)0.0480 (10)0.0051 (8)0.0021 (8)−0.0001 (9)
Cl1—C101.733 (2)C6—C11.392 (3)
Cl2—C61.738 (2)C8—C71.364 (3)
O1—C91.344 (2)C8—H80.9300
O1—H10.8200C13—H130.9300
N1—C131.268 (2)C1—C21.362 (3)
N1—C31.424 (2)C1—H1A0.9300
C12—C71.390 (3)C2—C31.394 (3)
C12—C111.392 (3)C2—H20.9300
C12—C131.456 (3)C4—C51.360 (3)
C9—C81.388 (3)C4—C31.391 (3)
C9—C101.392 (3)C4—H40.9300
C11—C101.368 (3)C5—H50.9300
C11—H110.9300C7—H70.9300
C6—C51.384 (3)
C9—O1—H1109.5C2—C1—H1A120.7
C13—N1—C3120.11 (16)C6—C1—H1A120.7
C7—C12—C11117.68 (18)C11—C10—C9120.60 (18)
C7—C12—C13124.26 (18)C11—C10—Cl1120.45 (15)
C11—C12—C13118.02 (17)C9—C10—Cl1118.90 (16)
O1—C9—C8123.27 (17)C1—C2—C3122.28 (19)
O1—C9—C10118.49 (17)C1—C2—H2118.9
C8—C9—C10118.21 (18)C3—C2—H2118.9
C10—C11—C12121.26 (18)C5—C4—C3121.8 (2)
C10—C11—H11119.4C5—C4—H4119.1
C12—C11—H11119.4C3—C4—H4119.1
C5—C6—C1120.6 (2)C4—C5—C6119.4 (2)
C5—C6—Cl2119.58 (16)C4—C5—H5120.3
C1—C6—Cl2119.77 (16)C6—C5—H5120.3
C7—C8—C9121.02 (19)C8—C7—C12121.22 (19)
C7—C8—H8119.5C8—C7—H7119.4
C9—C8—H8119.5C12—C7—H7119.4
N1—C13—C12125.60 (19)C4—C3—C2117.33 (18)
N1—C13—H13117.2C4—C3—N1125.25 (18)
C12—C13—H13117.2C2—C3—N1117.42 (16)
C2—C1—C6118.58 (19)
C7—C12—C11—C10−0.5 (3)C8—C9—C10—Cl1177.26 (15)
C13—C12—C11—C10177.53 (18)C6—C1—C2—C3−0.3 (3)
O1—C9—C8—C7178.76 (19)C3—C4—C5—C60.4 (4)
C10—C9—C8—C70.5 (3)C1—C6—C5—C4−0.3 (4)
C3—N1—C13—C12175.96 (17)Cl2—C6—C5—C4−179.65 (19)
C7—C12—C13—N1−0.3 (3)C9—C8—C7—C12−0.8 (3)
C11—C12—C13—N1−178.15 (18)C11—C12—C7—C80.7 (3)
C5—C6—C1—C20.3 (3)C13—C12—C7—C8−177.13 (19)
Cl2—C6—C1—C2179.62 (16)C5—C4—C3—C2−0.3 (3)
C12—C11—C10—C90.2 (3)C5—C4—C3—N1−179.3 (2)
C12—C11—C10—Cl1−177.24 (16)C1—C2—C3—C40.3 (3)
O1—C9—C10—C11−178.58 (17)C1—C2—C3—N1179.32 (18)
C8—C9—C10—C11−0.2 (3)C13—N1—C3—C4−7.7 (3)
O1—C9—C10—Cl1−1.1 (3)C13—N1—C3—C2173.35 (18)
D—H···AD—HH···AD···AD—H···A
O1—H1···N1i0.821.962.778 (2)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N1i0.821.962.778 (2)176

Symmetry code: (i) .

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