| Literature DB >> 22412551 |
Sizwe Makhoba1, Alfred Muller, Zanele Phasha.
Abstract
In the title compund, C(21)H(33)PSe, the Se=P bond is part of a distorted tetra-hedral environment on the P atom. Both cyclo-hexyl groups adopt chair conformations. A cone angle of 170° was calculated using an adaptation of the Tolman model. Inter-molecular C-H⋯Se and C-H⋯Cg contacts are observed (Cg is the centroid of the benzene ring).Entities:
Year: 2012 PMID: 22412551 PMCID: PMC3295440 DOI: 10.1107/S1600536812004643
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H33PSe | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 8561 reflections |
| θ = 2.3–28.2° | |
| µ = 1.90 mm−1 | |
| β = 103.106 (2)° | Cuboid, colourless |
| 0.22 × 0.14 × 0.1 mm | |
| Bruker APEX DUO 4K CCD diffractometer | 5140 independent reflections |
| Graphite monochromator | 4397 reflections with |
| Detector resolution: 8.4 pixels mm-1 | |
| φ and ω scans | θmax = 28.3°, θmin = 1.6° |
| Absorption correction: multi-scan ( | |
| 28000 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 5140 reflections | (Δ/σ)max = 0.001 |
| 210 parameters | Δρmax = 0.41 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Experimental. The intensity data was collected on a Bruker Apex DUO 4K CCD diffractometer using an exposure time of 10 s/frame. A total of 5967 frames were collected with a frame width of 0.5° covering up to θ = 28.31° with 100% completeness accomplished.Analytical data: 31P {H} NMR (CDCl3, 160 MHz): δ = 54.1 (s, 1P) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P1 | 0.63459 (3) | 0.16154 (3) | 0.07287 (3) | 0.01280 (8) | |
| Se1 | 0.589654 (11) | 0.097347 (10) | 0.218666 (12) | 0.01702 (5) | |
| C1 | 0.53424 (10) | 0.24106 (10) | −0.01384 (12) | 0.0147 (3) | |
| H1 | 0.564 | 0.2718 | −0.0762 | 0.018* | |
| C2 | 0.43736 (11) | 0.18232 (11) | −0.07302 (13) | 0.0193 (3) | |
| H2A | 0.4569 | 0.1344 | −0.1272 | 0.023* | |
| H2B | 0.4107 | 0.1458 | −0.0132 | 0.023* | |
| C3 | 0.35114 (11) | 0.24925 (11) | −0.14041 (14) | 0.0228 (3) | |
| H3A | 0.375 | 0.2799 | −0.206 | 0.027* | |
| H3B | 0.2881 | 0.2099 | −0.1733 | 0.027* | |
| C4 | 0.32313 (12) | 0.32877 (12) | −0.06224 (15) | 0.0239 (3) | |
| H4A | 0.2693 | 0.3722 | −0.1089 | 0.029* | |
| H4B | 0.2936 | 0.2985 | −0.0005 | 0.029* | |
| C5 | 0.41921 (12) | 0.38870 (11) | −0.00652 (14) | 0.0222 (3) | |
| H5A | 0.3998 | 0.4382 | 0.046 | 0.027* | |
| H5B | 0.4452 | 0.4234 | −0.068 | 0.027* | |
| C6 | 0.50595 (11) | 0.32336 (11) | 0.06286 (13) | 0.0193 (3) | |
| H6A | 0.4826 | 0.2944 | 0.1296 | 0.023* | |
| H6B | 0.5688 | 0.3634 | 0.0942 | 0.023* | |
| C7 | 0.66780 (10) | 0.06797 (10) | −0.02535 (12) | 0.0139 (3) | |
| H7 | 0.6056 | 0.0244 | −0.0499 | 0.017* | |
| C8 | 0.69309 (11) | 0.11074 (10) | −0.13626 (13) | 0.0174 (3) | |
| H8A | 0.6317 | 0.1473 | −0.1804 | 0.021* | |
| H8B | 0.7523 | 0.157 | −0.1145 | 0.021* | |
| C9 | 0.72156 (12) | 0.02992 (11) | −0.21352 (13) | 0.0198 (3) | |
| H9A | 0.6606 | −0.0136 | −0.24 | 0.024* | |
| H9B | 0.7393 | 0.0594 | −0.2833 | 0.024* | |
| C10 | 0.81410 (12) | −0.02969 (11) | −0.14730 (13) | 0.0205 (3) | |
| H10A | 0.8764 | 0.0128 | −0.1253 | 0.025* | |
| H10B | 0.8301 | −0.0824 | −0.1981 | 0.025* | |
| C11 | 0.78950 (12) | −0.07406 (11) | −0.03796 (13) | 0.0206 (3) | |
| H11A | 0.8515 | −0.11 | 0.0058 | 0.025* | |
| H11B | 0.7313 | −0.1213 | −0.0606 | 0.025* | |
| C12 | 0.75906 (11) | 0.00468 (10) | 0.04060 (12) | 0.0173 (3) | |
| H12A | 0.8203 | 0.0469 | 0.0712 | 0.021* | |
| H12B | 0.7388 | −0.0269 | 0.1078 | 0.021* | |
| C13 | 0.75153 (10) | 0.23630 (10) | 0.11383 (12) | 0.0137 (3) | |
| C14 | 0.77795 (11) | 0.30400 (10) | 0.03631 (12) | 0.0159 (3) | |
| H14 | 0.7302 | 0.3173 | −0.0356 | 0.019* | |
| C15 | 0.87363 (11) | 0.35183 (10) | 0.06399 (13) | 0.0171 (3) | |
| H15 | 0.8906 | 0.3976 | 0.0106 | 0.021* | |
| C16 | 0.94567 (10) | 0.33377 (10) | 0.16937 (12) | 0.0160 (3) | |
| C17 | 0.91711 (11) | 0.26870 (10) | 0.24719 (13) | 0.0167 (3) | |
| H17 | 0.9639 | 0.2567 | 0.3201 | 0.02* | |
| C18 | 0.82115 (11) | 0.22069 (10) | 0.22028 (12) | 0.0150 (3) | |
| H18 | 0.8031 | 0.1769 | 0.2751 | 0.018* | |
| C19 | 1.05187 (11) | 0.38265 (11) | 0.19607 (13) | 0.0193 (3) | |
| H19 | 1.0879 | 0.3646 | 0.2775 | 0.023* | |
| C20 | 1.11914 (12) | 0.34511 (13) | 0.11461 (15) | 0.0278 (4) | |
| H20A | 1.1266 | 0.2741 | 0.1225 | 0.042* | |
| H20B | 1.1884 | 0.3757 | 0.1354 | 0.042* | |
| H20C | 1.0855 | 0.3616 | 0.0339 | 0.042* | |
| C21 | 1.04331 (12) | 0.49378 (11) | 0.19028 (14) | 0.0241 (3) | |
| H21A | 1.0042 | 0.5134 | 0.1126 | 0.036* | |
| H21B | 1.1135 | 0.5223 | 0.2055 | 0.036* | |
| H21C | 1.0068 | 0.5169 | 0.249 | 0.036* |
| P1 | 0.01478 (16) | 0.01252 (16) | 0.01143 (17) | −0.00245 (12) | 0.00365 (13) | −0.00016 (13) |
| Se1 | 0.02188 (8) | 0.01700 (8) | 0.01373 (8) | −0.00395 (6) | 0.00727 (5) | 0.00076 (5) |
| C1 | 0.0143 (6) | 0.0151 (7) | 0.0144 (7) | −0.0018 (5) | 0.0029 (5) | 0.0004 (5) |
| C2 | 0.0165 (6) | 0.0179 (7) | 0.0223 (8) | −0.0026 (5) | 0.0017 (6) | −0.0022 (6) |
| C3 | 0.0170 (7) | 0.0237 (8) | 0.0247 (8) | −0.0027 (6) | −0.0014 (6) | 0.0017 (6) |
| C4 | 0.0187 (7) | 0.0245 (8) | 0.0288 (9) | 0.0034 (6) | 0.0064 (6) | 0.0064 (7) |
| C5 | 0.0246 (7) | 0.0176 (7) | 0.0244 (8) | 0.0027 (6) | 0.0054 (6) | 0.0019 (6) |
| C6 | 0.0215 (7) | 0.0169 (7) | 0.0191 (8) | 0.0009 (5) | 0.0040 (6) | −0.0019 (6) |
| C7 | 0.0162 (6) | 0.0125 (6) | 0.0130 (7) | −0.0018 (5) | 0.0037 (5) | −0.0012 (5) |
| C8 | 0.0224 (7) | 0.0164 (7) | 0.0142 (7) | 0.0010 (5) | 0.0060 (6) | 0.0011 (5) |
| C9 | 0.0278 (7) | 0.0193 (7) | 0.0135 (7) | 0.0011 (6) | 0.0075 (6) | 0.0000 (6) |
| C10 | 0.0236 (7) | 0.0199 (7) | 0.0200 (8) | 0.0008 (6) | 0.0092 (6) | −0.0022 (6) |
| C11 | 0.0261 (7) | 0.0176 (7) | 0.0195 (8) | 0.0038 (6) | 0.0082 (6) | 0.0008 (6) |
| C12 | 0.0211 (7) | 0.0179 (7) | 0.0131 (7) | 0.0024 (5) | 0.0041 (5) | 0.0019 (5) |
| C13 | 0.0150 (6) | 0.0127 (6) | 0.0134 (7) | −0.0014 (5) | 0.0037 (5) | −0.0030 (5) |
| C14 | 0.0177 (6) | 0.0173 (7) | 0.0118 (7) | −0.0018 (5) | 0.0011 (5) | 0.0003 (5) |
| C15 | 0.0199 (7) | 0.0169 (7) | 0.0149 (7) | −0.0044 (5) | 0.0047 (5) | 0.0020 (5) |
| C16 | 0.0155 (6) | 0.0151 (6) | 0.0168 (7) | −0.0019 (5) | 0.0027 (5) | −0.0030 (5) |
| C17 | 0.0173 (6) | 0.0170 (7) | 0.0145 (7) | 0.0005 (5) | 0.0009 (5) | −0.0002 (5) |
| C18 | 0.0191 (6) | 0.0125 (6) | 0.0136 (7) | 0.0005 (5) | 0.0044 (5) | 0.0003 (5) |
| C19 | 0.0165 (6) | 0.0234 (8) | 0.0165 (7) | −0.0047 (6) | 0.0010 (5) | 0.0004 (6) |
| C20 | 0.0186 (7) | 0.0364 (9) | 0.0290 (9) | 0.0006 (6) | 0.0064 (6) | −0.0011 (7) |
| C21 | 0.0236 (7) | 0.0239 (8) | 0.0243 (8) | −0.0089 (6) | 0.0045 (6) | −0.0019 (6) |
| P1—C13 | 1.8176 (13) | C9—H9B | 0.99 |
| P1—C1 | 1.8321 (14) | C10—C11 | 1.524 (2) |
| P1—C7 | 1.8442 (14) | C10—H10A | 0.99 |
| P1—Se1 | 2.1288 (4) | C10—H10B | 0.99 |
| C1—C2 | 1.5329 (18) | C11—C12 | 1.532 (2) |
| C1—C6 | 1.5421 (19) | C11—H11A | 0.99 |
| C1—H1 | 1 | C11—H11B | 0.99 |
| C2—C3 | 1.531 (2) | C12—H12A | 0.99 |
| C2—H2A | 0.99 | C12—H12B | 0.99 |
| C2—H2B | 0.99 | C13—C18 | 1.3908 (19) |
| C3—C4 | 1.524 (2) | C13—C14 | 1.3994 (19) |
| C3—H3A | 0.99 | C14—C15 | 1.3886 (19) |
| C3—H3B | 0.99 | C14—H14 | 0.95 |
| C4—C5 | 1.524 (2) | C15—C16 | 1.4018 (19) |
| C4—H4A | 0.99 | C15—H15 | 0.95 |
| C4—H4B | 0.99 | C16—C17 | 1.390 (2) |
| C5—C6 | 1.531 (2) | C16—C19 | 1.5143 (19) |
| C5—H5A | 0.99 | C17—C18 | 1.3928 (19) |
| C5—H5B | 0.99 | C17—H17 | 0.95 |
| C6—H6A | 0.99 | C18—H18 | 0.95 |
| C6—H6B | 0.99 | C19—C21 | 1.527 (2) |
| C7—C8 | 1.536 (2) | C19—C20 | 1.533 (2) |
| C7—C12 | 1.5392 (19) | C19—H19 | 1 |
| C7—H7 | 1 | C20—H20A | 0.98 |
| C8—C9 | 1.533 (2) | C20—H20B | 0.98 |
| C8—H8A | 0.99 | C20—H20C | 0.98 |
| C8—H8B | 0.99 | C21—H21A | 0.98 |
| C9—C10 | 1.524 (2) | C21—H21B | 0.98 |
| C9—H9A | 0.99 | C21—H21C | 0.98 |
| C13—P1—C1 | 105.70 (6) | C10—C9—H9B | 109.5 |
| C13—P1—C7 | 104.63 (6) | C8—C9—H9B | 109.5 |
| C1—P1—C7 | 107.81 (6) | H9A—C9—H9B | 108 |
| C13—P1—Se1 | 112.99 (5) | C9—C10—C11 | 110.45 (12) |
| C1—P1—Se1 | 113.56 (5) | C9—C10—H10A | 109.6 |
| C7—P1—Se1 | 111.56 (5) | C11—C10—H10A | 109.6 |
| C2—C1—C6 | 111.41 (11) | C9—C10—H10B | 109.6 |
| C2—C1—P1 | 111.05 (10) | C11—C10—H10B | 109.6 |
| C6—C1—P1 | 110.26 (10) | H10A—C10—H10B | 108.1 |
| C2—C1—H1 | 108 | C10—C11—C12 | 111.36 (12) |
| C6—C1—H1 | 108 | C10—C11—H11A | 109.4 |
| P1—C1—H1 | 108 | C12—C11—H11A | 109.4 |
| C3—C2—C1 | 111.18 (12) | C10—C11—H11B | 109.4 |
| C3—C2—H2A | 109.4 | C12—C11—H11B | 109.4 |
| C1—C2—H2A | 109.4 | H11A—C11—H11B | 108 |
| C3—C2—H2B | 109.4 | C11—C12—C7 | 111.80 (12) |
| C1—C2—H2B | 109.4 | C11—C12—H12A | 109.3 |
| H2A—C2—H2B | 108 | C7—C12—H12A | 109.3 |
| C4—C3—C2 | 111.46 (13) | C11—C12—H12B | 109.3 |
| C4—C3—H3A | 109.3 | C7—C12—H12B | 109.3 |
| C2—C3—H3A | 109.3 | H12A—C12—H12B | 107.9 |
| C4—C3—H3B | 109.3 | C18—C13—C14 | 118.74 (12) |
| C2—C3—H3B | 109.3 | C18—C13—P1 | 119.72 (11) |
| H3A—C3—H3B | 108 | C14—C13—P1 | 121.31 (10) |
| C5—C4—C3 | 110.84 (12) | C15—C14—C13 | 120.29 (13) |
| C5—C4—H4A | 109.5 | C15—C14—H14 | 119.9 |
| C3—C4—H4A | 109.5 | C13—C14—H14 | 119.9 |
| C5—C4—H4B | 109.5 | C14—C15—C16 | 121.17 (13) |
| C3—C4—H4B | 109.5 | C14—C15—H15 | 119.4 |
| H4A—C4—H4B | 108.1 | C16—C15—H15 | 119.4 |
| C4—C5—C6 | 110.98 (12) | C17—C16—C15 | 117.95 (13) |
| C4—C5—H5A | 109.4 | C17—C16—C19 | 121.34 (13) |
| C6—C5—H5A | 109.4 | C15—C16—C19 | 120.70 (13) |
| C4—C5—H5B | 109.4 | C16—C17—C18 | 121.21 (13) |
| C6—C5—H5B | 109.4 | C16—C17—H17 | 119.4 |
| H5A—C5—H5B | 108 | C18—C17—H17 | 119.4 |
| C5—C6—C1 | 111.31 (12) | C13—C18—C17 | 120.56 (13) |
| C5—C6—H6A | 109.4 | C13—C18—H18 | 119.7 |
| C1—C6—H6A | 109.4 | C17—C18—H18 | 119.7 |
| C5—C6—H6B | 109.4 | C16—C19—C21 | 112.13 (12) |
| C1—C6—H6B | 109.4 | C16—C19—C20 | 110.84 (12) |
| H6A—C6—H6B | 108 | C21—C19—C20 | 110.70 (13) |
| C8—C7—C12 | 110.53 (11) | C16—C19—H19 | 107.7 |
| C8—C7—P1 | 113.34 (9) | C21—C19—H19 | 107.7 |
| C12—C7—P1 | 110.03 (9) | C20—C19—H19 | 107.7 |
| C8—C7—H7 | 107.6 | C19—C20—H20A | 109.5 |
| C12—C7—H7 | 107.6 | C19—C20—H20B | 109.5 |
| P1—C7—H7 | 107.6 | H20A—C20—H20B | 109.5 |
| C9—C8—C7 | 111.02 (11) | C19—C20—H20C | 109.5 |
| C9—C8—H8A | 109.4 | H20A—C20—H20C | 109.5 |
| C7—C8—H8A | 109.4 | H20B—C20—H20C | 109.5 |
| C9—C8—H8B | 109.4 | C19—C21—H21A | 109.5 |
| C7—C8—H8B | 109.4 | C19—C21—H21B | 109.5 |
| H8A—C8—H8B | 108 | H21A—C21—H21B | 109.5 |
| C10—C9—C8 | 110.89 (12) | C19—C21—H21C | 109.5 |
| C10—C9—H9A | 109.5 | H21A—C21—H21C | 109.5 |
| C8—C9—H9A | 109.5 | H21B—C21—H21C | 109.5 |
| C13—P1—C1—C2 | 169.50 (10) | C9—C10—C11—C12 | −56.47 (16) |
| C7—P1—C1—C2 | 58.04 (11) | C10—C11—C12—C7 | 54.94 (16) |
| Se1—P1—C1—C2 | −66.09 (11) | C8—C7—C12—C11 | −53.92 (15) |
| C13—P1—C1—C6 | −66.51 (11) | P1—C7—C12—C11 | −179.86 (10) |
| C7—P1—C1—C6 | −177.97 (9) | C1—P1—C13—C18 | 147.20 (11) |
| Se1—P1—C1—C6 | 57.90 (10) | C7—P1—C13—C18 | −99.12 (12) |
| C6—C1—C2—C3 | 53.72 (17) | Se1—P1—C13—C18 | 22.43 (13) |
| P1—C1—C2—C3 | 177.05 (10) | C1—P1—C13—C14 | −38.34 (13) |
| C1—C2—C3—C4 | −55.38 (17) | C7—P1—C13—C14 | 75.35 (13) |
| C2—C3—C4—C5 | 57.02 (17) | Se1—P1—C13—C14 | −163.10 (10) |
| C3—C4—C5—C6 | −57.05 (17) | C18—C13—C14—C15 | 2.3 (2) |
| C4—C5—C6—C1 | 55.67 (17) | P1—C13—C14—C15 | −172.26 (11) |
| C2—C1—C6—C5 | −54.09 (16) | C13—C14—C15—C16 | 0.0 (2) |
| P1—C1—C6—C5 | −177.88 (10) | C14—C15—C16—C17 | −2.0 (2) |
| C13—P1—C7—C8 | −61.65 (11) | C14—C15—C16—C19 | 177.00 (13) |
| C1—P1—C7—C8 | 50.53 (11) | C15—C16—C17—C18 | 1.8 (2) |
| Se1—P1—C7—C8 | 175.86 (8) | C19—C16—C17—C18 | −177.24 (13) |
| C13—P1—C7—C12 | 62.67 (11) | C14—C13—C18—C17 | −2.5 (2) |
| C1—P1—C7—C12 | 174.85 (9) | P1—C13—C18—C17 | 172.11 (11) |
| Se1—P1—C7—C12 | −59.81 (10) | C16—C17—C18—C13 | 0.5 (2) |
| C12—C7—C8—C9 | 55.13 (15) | C17—C16—C19—C21 | −124.22 (15) |
| P1—C7—C8—C9 | 179.19 (10) | C15—C16—C19—C21 | 56.82 (19) |
| C7—C8—C9—C10 | −57.63 (16) | C17—C16—C19—C20 | 111.50 (16) |
| C8—C9—C10—C11 | 57.88 (16) | C15—C16—C19—C20 | −67.46 (18) |
| H··· | ||||
| C1—H1···Se1i | 1.00 | 3.09 | 4.0500 (14) | 162 |
| C9—H9 | 0.99 | 2.81 | 3.6471 | 143 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C13–C18 benzene ring.
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1⋯Se1i | 1.00 | 3.09 | 4.0500 (14) | 162 |
| C9—H9 | 0.99 | 2.81 | 3.6471 | 143 |
Symmetry codes: (i) ; (ii) .