Literature DB >> 22412532

9-(3-Fluoro-phen-oxy-carbon-yl)-10-methyl-acridinium trifluoro-methane-sulfonate monohydrate.

Damian Trzybiński1, Agnieszka Ożóg, Karol Krzymiński, Jerzy Błażejowski.   

Abstract

In the crystal structure of the title mol-ecular salt, C(21)H(15)FNO(2) (+)·CF(3)SO(3) (-)·H(2)O, the cations form inversion dimers through π-π inter-actions between the acridine ring systems. These dimers are linked via C-H⋯O and C-F⋯π inter-actions to adjacent anions, and by C-H⋯π and C-F⋯π inter-actions to neighbouring cations. The water mol-ecule links two sites of the cation by C-H⋯O inter-actions and two adjacent anions by O-H⋯O hydrogen bonds. The mean planes of the acridine and benzene ring systems are oriented at a dihedral angle of 15.1 (1)°. The carboxyl group is twisted at an angle of 84.5 (1)° relative to the acridine skeleton. The mean planes of the acridine ring systems are parallel in the crystal.

Entities:  

Year:  2012        PMID: 22412532      PMCID: PMC3295421          DOI: 10.1107/S1600536812003054

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the chemiluminogenic features of 9-phen­oxy­carbonyl-10-methyl­acridinium trifluoro­methane­sulfonates, see: King et al. (2007 ▶); Krzymiński et al. (2011 ▶); Roda et al. (2003 ▶). For related structures, see: Trzybiński et al. (2010 ▶). For inter­molecular inter­actions, see: Aakeröy et al. (1992 ▶); Dorn et al. (2005 ▶); Hunter et al. (2001 ▶); Novoa et al. (2006 ▶); Takahashi et al. (2001 ▶). For the synthesis, see: Sato (1996 ▶); Trzybiński et al. (2010 ▶).

Experimental

Crystal data

C21H15FNO2CF3O3S−·H2O M = 499.44 Triclinic, a = 9.5144 (10) Å b = 11.5654 (11) Å c = 11.9680 (12) Å α = 109.975 (9)° β = 97.838 (8)° γ = 113.197 (9)° V = 1080.3 (2) Å3 Z = 2 Mo Kα radiation μ = 0.23 mm−1 T = 295 K 0.40 × 0.15 × 0.10 mm

Data collection

Oxford Gemini R Ultra Ruby CCD diffractometer 9148 measured reflections 3769 independent reflections 1647 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.129 S = 0.81 3769 reflections 314 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.28 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2008 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812003054/xu5452sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812003054/xu5452Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812003054/xu5452Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H15FNO2+·CF3O3S·H2OZ = 2
Mr = 499.44F(000) = 512
Triclinic, P1Dx = 1.535 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.5144 (10) ÅCell parameters from 2551 reflections
b = 11.5654 (11) Åθ = 3.1–29.0°
c = 11.9680 (12) ŵ = 0.23 mm1
α = 109.975 (9)°T = 295 K
β = 97.838 (8)°Prism, light yellow
γ = 113.197 (9)°0.40 × 0.15 × 0.10 mm
V = 1080.3 (2) Å3
Oxford Gemini R Ultra Ruby CCD diffractometer1647 reflections with I > 2σ(I)
Radiation source: Enhanced (Mo) X-ray SourceRint = 0.050
Graphite monochromatorθmax = 25.1°, θmin = 3.1°
Detector resolution: 10.4002 pixels mm-1h = −11→11
ω scansk = −13→13
9148 measured reflectionsl = −13→14
3769 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.129H atoms treated by a mixture of independent and constrained refinement
S = 0.81w = 1/[σ2(Fo2) + (0.0706P)2] where P = (Fo2 + 2Fc2)/3
3769 reflections(Δ/σ)max = 0.003
314 parametersΔρmax = 0.27 e Å3
3 restraintsΔρmin = −0.28 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
C10.6064 (4)0.6768 (4)0.3644 (3)0.0694 (10)
H10.52260.69300.38420.083*
O1W0.2866 (5)0.6414 (4)0.4672 (4)0.1503 (14)
H1W0.229 (7)0.553 (3)0.420 (5)0.225*
H2W0.258 (8)0.655 (6)0.535 (4)0.225*
C20.6940 (5)0.6521 (4)0.4419 (3)0.0774 (11)
H20.66940.64940.51390.093*
C30.8221 (5)0.6303 (4)0.4147 (4)0.0780 (11)
H30.88360.61550.47030.094*
C40.8587 (4)0.6302 (4)0.3100 (3)0.0669 (9)
H40.94410.61470.29380.080*
C50.7416 (4)0.6647 (3)−0.0808 (3)0.0610 (9)
H50.82790.6514−0.09820.073*
C60.6469 (5)0.6792 (4)−0.1633 (3)0.0701 (10)
H60.66880.6748−0.23760.084*
C70.5172 (4)0.7005 (4)−0.1417 (3)0.0712 (10)
H70.45350.7095−0.20110.085*
C80.4848 (4)0.7081 (3)−0.0346 (3)0.0619 (9)
H80.39840.7228−0.02000.074*
C90.5504 (4)0.7021 (3)0.1689 (3)0.0519 (8)
N100.8010 (3)0.6524 (3)0.1173 (2)0.0524 (7)
C110.6393 (4)0.6788 (3)0.2530 (3)0.0539 (8)
C120.7684 (4)0.6534 (3)0.2251 (3)0.0521 (8)
C130.5797 (3)0.6941 (3)0.0564 (3)0.0502 (8)
C140.7103 (4)0.6698 (3)0.0315 (3)0.0501 (8)
C150.4158 (5)0.7316 (4)0.1978 (3)0.0609 (9)
O160.4730 (3)0.8678 (2)0.2685 (2)0.0703 (7)
O170.2782 (3)0.6459 (3)0.1585 (3)0.0872 (8)
C180.3576 (4)0.9124 (3)0.2952 (3)0.0613 (9)
C190.3045 (4)0.9060 (4)0.3932 (3)0.0672 (9)
H190.33890.86930.44260.081*
C200.1975 (4)0.9564 (4)0.4164 (4)0.0749 (10)
C210.1428 (5)1.0080 (4)0.3448 (4)0.0842 (12)
H210.06871.03950.36240.101*
C220.1981 (5)1.0130 (4)0.2468 (4)0.0915 (13)
H220.16131.04780.19660.110*
C230.3089 (5)0.9664 (4)0.2211 (4)0.0816 (11)
H230.34920.97160.15540.098*
F240.1452 (3)0.9541 (3)0.5144 (2)0.1166 (9)
C250.9405 (4)0.6317 (4)0.0943 (3)0.0695 (10)
H25A0.95600.64130.01970.104*
H25B0.92040.54010.08430.104*
H25C1.03550.70050.16420.104*
S260.08915 (12)0.70895 (10)0.76540 (9)0.0699 (3)
O270.1099 (3)0.6733 (3)0.8669 (2)0.0903 (8)
O280.1777 (3)0.6826 (3)0.6828 (2)0.1036 (9)
O29−0.0729 (3)0.6712 (3)0.7054 (2)0.0931 (8)
C300.1857 (6)0.8973 (5)0.8431 (4)0.0860 (12)
F310.1788 (4)0.9507 (3)0.7638 (3)0.1385 (10)
F320.3375 (3)0.9479 (3)0.9058 (3)0.1292 (9)
F330.1148 (4)0.9392 (3)0.9240 (3)0.1307 (10)
U11U22U33U12U13U23
C10.066 (3)0.071 (3)0.065 (2)0.030 (2)0.023 (2)0.025 (2)
O1W0.182 (4)0.113 (3)0.147 (3)0.046 (3)0.105 (3)0.056 (3)
C20.093 (3)0.077 (3)0.058 (2)0.037 (3)0.021 (2)0.029 (2)
C30.084 (3)0.074 (3)0.070 (3)0.039 (2)0.009 (2)0.030 (2)
C40.062 (2)0.070 (3)0.068 (2)0.034 (2)0.015 (2)0.028 (2)
C50.056 (2)0.059 (2)0.063 (2)0.023 (2)0.021 (2)0.0251 (19)
C60.075 (3)0.069 (3)0.066 (2)0.029 (2)0.024 (2)0.034 (2)
C70.069 (3)0.073 (3)0.074 (3)0.033 (2)0.013 (2)0.039 (2)
C80.054 (2)0.063 (2)0.073 (2)0.030 (2)0.018 (2)0.031 (2)
C90.0383 (19)0.041 (2)0.063 (2)0.0149 (17)0.0100 (18)0.0155 (17)
N100.0393 (16)0.0494 (17)0.0600 (17)0.0198 (14)0.0128 (14)0.0170 (14)
C110.049 (2)0.047 (2)0.055 (2)0.0186 (18)0.0146 (18)0.0156 (17)
C120.046 (2)0.047 (2)0.053 (2)0.0194 (18)0.0093 (17)0.0160 (17)
C130.0399 (19)0.046 (2)0.058 (2)0.0177 (17)0.0096 (17)0.0199 (17)
C140.0427 (19)0.043 (2)0.057 (2)0.0176 (17)0.0115 (17)0.0187 (17)
C150.052 (2)0.062 (3)0.069 (2)0.029 (2)0.019 (2)0.026 (2)
O160.0491 (15)0.0527 (17)0.0950 (18)0.0241 (14)0.0246 (14)0.0159 (14)
O170.0458 (17)0.0675 (18)0.120 (2)0.0229 (16)0.0242 (16)0.0149 (16)
C180.047 (2)0.050 (2)0.075 (2)0.0228 (19)0.019 (2)0.0160 (19)
C190.053 (2)0.062 (2)0.070 (2)0.023 (2)0.017 (2)0.017 (2)
C200.063 (2)0.078 (3)0.067 (3)0.029 (2)0.029 (2)0.015 (2)
C210.076 (3)0.075 (3)0.101 (3)0.047 (3)0.030 (3)0.024 (3)
C220.088 (3)0.091 (3)0.115 (4)0.054 (3)0.042 (3)0.049 (3)
C230.084 (3)0.079 (3)0.099 (3)0.043 (3)0.050 (3)0.044 (3)
F240.1057 (19)0.148 (2)0.0961 (18)0.0634 (18)0.0560 (16)0.0400 (16)
C250.053 (2)0.084 (3)0.077 (2)0.042 (2)0.023 (2)0.029 (2)
S260.0717 (7)0.0774 (7)0.0647 (6)0.0376 (6)0.0255 (6)0.0312 (5)
O270.104 (2)0.111 (2)0.0891 (19)0.0613 (19)0.0385 (17)0.0646 (18)
O280.124 (2)0.117 (2)0.099 (2)0.073 (2)0.067 (2)0.0466 (18)
O290.0619 (18)0.116 (2)0.0755 (18)0.0298 (17)0.0063 (14)0.0341 (17)
C300.084 (3)0.096 (3)0.093 (3)0.050 (3)0.028 (3)0.048 (3)
F310.149 (3)0.122 (2)0.169 (3)0.059 (2)0.039 (2)0.101 (2)
F320.0778 (19)0.102 (2)0.152 (2)0.0157 (16)−0.0044 (17)0.0420 (18)
F330.152 (3)0.104 (2)0.129 (2)0.077 (2)0.047 (2)0.0220 (17)
C1—C21.340 (4)C11—C121.427 (4)
C1—C111.416 (4)C13—C141.425 (4)
C1—H10.9300C15—O171.187 (4)
O1W—H1W0.86 (2)C15—O161.335 (4)
O1W—H2W0.874 (19)O16—C181.415 (3)
C2—C31.396 (5)C18—C191.352 (4)
C2—H20.9300C18—C231.373 (5)
C3—C41.345 (4)C19—C201.375 (4)
C3—H30.9300C19—H190.9300
C4—C121.404 (4)C20—F241.339 (4)
C4—H40.9300C20—C211.354 (5)
C5—C61.343 (4)C21—C221.359 (5)
C5—C141.404 (4)C21—H210.9300
C5—H50.9300C22—C231.385 (5)
C6—C71.390 (4)C22—H220.9300
C6—H60.9300C23—H230.9300
C7—C81.342 (4)C25—H25A0.9600
C7—H70.9300C25—H25B0.9600
C8—C131.412 (4)C25—H25C0.9600
C8—H80.9300S26—O281.415 (2)
C9—C131.391 (4)S26—O271.423 (2)
C9—C111.391 (4)S26—O291.427 (2)
C9—C151.504 (4)S26—C301.806 (5)
N10—C121.365 (4)C30—F311.304 (4)
N10—C141.369 (4)C30—F321.315 (4)
N10—C251.484 (3)C30—F331.320 (4)
C2—C1—C11121.1 (3)C5—C14—C13118.5 (3)
C2—C1—H1119.4O17—C15—O16125.6 (3)
C11—C1—H1119.4O17—C15—C9124.2 (3)
H1W—O1W—H2W105 (3)O16—C15—C9110.2 (3)
C1—C2—C3120.1 (3)C15—O16—C18116.3 (3)
C1—C2—H2120.0C19—C18—C23122.6 (3)
C3—C2—H2120.0C19—C18—O16120.1 (3)
C4—C3—C2121.6 (3)C23—C18—O16117.2 (3)
C4—C3—H3119.2C18—C19—C20116.8 (3)
C2—C3—H3119.2C18—C19—H19121.6
C3—C4—C12120.3 (3)C20—C19—H19121.6
C3—C4—H4119.8F24—C20—C21118.8 (3)
C12—C4—H4119.8F24—C20—C19118.2 (4)
C6—C5—C14119.9 (3)C21—C20—C19123.0 (4)
C6—C5—H5120.0C20—C21—C22118.8 (3)
C14—C5—H5120.0C20—C21—H21120.6
C5—C6—C7122.4 (3)C22—C21—H21120.6
C5—C6—H6118.8C21—C22—C23120.4 (4)
C7—C6—H6118.8C21—C22—H22119.8
C8—C7—C6119.4 (3)C23—C22—H22119.8
C8—C7—H7120.3C18—C23—C22118.2 (4)
C6—C7—H7120.3C18—C23—H23120.9
C7—C8—C13121.2 (3)C22—C23—H23120.9
C7—C8—H8119.4N10—C25—H25A109.5
C13—C8—H8119.4N10—C25—H25B109.5
C13—C9—C11121.5 (3)H25A—C25—H25B109.5
C13—C9—C15119.1 (3)N10—C25—H25C109.5
C11—C9—C15119.4 (3)H25A—C25—H25C109.5
C12—N10—C14122.5 (2)H25B—C25—H25C109.5
C12—N10—C25117.7 (2)O28—S26—O27115.73 (15)
C14—N10—C25119.8 (3)O28—S26—O29114.66 (17)
C9—C11—C1123.2 (3)O27—S26—O29115.01 (16)
C9—C11—C12118.6 (3)O28—S26—C30102.91 (19)
C1—C11—C12118.2 (3)O27—S26—C30102.55 (19)
N10—C12—C4121.9 (3)O29—S26—C30103.36 (18)
N10—C12—C11119.4 (3)F31—C30—F32109.0 (4)
C4—C12—C11118.7 (3)F31—C30—F33107.7 (3)
C9—C13—C8122.8 (3)F32—C30—F33107.5 (4)
C9—C13—C14118.6 (3)F31—C30—S26111.8 (3)
C8—C13—C14118.6 (3)F32—C30—S26110.4 (3)
N10—C14—C5122.2 (3)F33—C30—S26110.3 (3)
N10—C14—C13119.3 (3)
C11—C1—C2—C31.2 (6)C6—C5—C14—C13−1.7 (5)
C1—C2—C3—C4−1.6 (6)C9—C13—C14—N101.2 (4)
C2—C3—C4—C120.5 (6)C8—C13—C14—N10−178.4 (3)
C14—C5—C6—C70.6 (5)C9—C13—C14—C5−178.6 (3)
C5—C6—C7—C80.4 (5)C8—C13—C14—C51.8 (4)
C6—C7—C8—C13−0.3 (5)C13—C9—C15—O1781.3 (5)
C13—C9—C11—C1−175.7 (3)C11—C9—C15—O17−96.5 (4)
C15—C9—C11—C12.1 (5)C13—C9—C15—O16−95.9 (3)
C13—C9—C11—C123.3 (5)C11—C9—C15—O1686.3 (4)
C15—C9—C11—C12−178.9 (3)O17—C15—O16—C18−1.8 (5)
C2—C1—C11—C9179.1 (3)C9—C15—O16—C18175.4 (3)
C2—C1—C11—C120.1 (5)C15—O16—C18—C1985.5 (4)
C14—N10—C12—C4177.5 (3)C15—O16—C18—C23−97.1 (4)
C25—N10—C12—C4−2.5 (4)C23—C18—C19—C200.1 (5)
C14—N10—C12—C11−2.5 (4)O16—C18—C19—C20177.4 (3)
C25—N10—C12—C11177.4 (3)C18—C19—C20—F24−178.7 (3)
C3—C4—C12—N10−179.2 (3)C18—C19—C20—C211.3 (6)
C3—C4—C12—C110.8 (5)F24—C20—C21—C22178.7 (3)
C9—C11—C12—N10−0.1 (4)C19—C20—C21—C22−1.3 (6)
C1—C11—C12—N10178.9 (3)C20—C21—C22—C23−0.2 (6)
C9—C11—C12—C4179.8 (3)C19—C18—C23—C22−1.5 (6)
C1—C11—C12—C4−1.1 (4)O16—C18—C23—C22−178.9 (3)
C11—C9—C13—C8175.7 (3)C21—C22—C23—C181.6 (6)
C15—C9—C13—C8−2.0 (5)O28—S26—C30—F3159.7 (3)
C11—C9—C13—C14−3.9 (4)O27—S26—C30—F31−179.8 (3)
C15—C9—C13—C14178.4 (3)O29—S26—C30—F31−60.0 (3)
C7—C8—C13—C9179.6 (3)O28—S26—C30—F32−61.8 (3)
C7—C8—C13—C14−0.8 (5)O27—S26—C30—F3258.7 (3)
C12—N10—C14—C5−178.2 (3)O29—S26—C30—F32178.6 (3)
C25—N10—C14—C51.9 (4)O28—S26—C30—F33179.5 (3)
C12—N10—C14—C132.0 (4)O27—S26—C30—F33−60.0 (3)
C25—N10—C14—C13−178.0 (3)O29—S26—C30—F3359.8 (3)
C6—C5—C14—N10178.5 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O29i0.85 (3)2.24 (3)3.071 (5)172 (4)
O1W—H2W···O280.89 (3)1.99 (3)2.873 (5)176 (8)
C1—H1···O1W0.932.513.365 (7)152
C3—H3···O29ii0.932.603.298 (5)133
C19—H19···O1W0.932.603.415 (7)145
C25—H25A···O27iii0.962.533.424 (5)155
C25—H25C···Cg4ii0.962.643.527 (4)154
XIJI···JX···JXI···J
C20F24Cg2iv3.743 (3)4.139 (5)97.6 (2)
C20F24Cg2v3.854 (4)4.188 (5)94.9 (3)
C30F31Cg1v3.665 (4)4.519 (6)123.6 (3)
C30F31Cg3v3.910 (4)4.049 (6)86.7 (3)
C30F33Cg3v3.654 (4)4.049 (6)97.7 (3)
IJCgI···CgJDihedral angleCgIPerpCgIOffset
11vi3.990 (2)03.591 (2)1.739 (2)
13vi3.645 (2)2.08 (17)3.557 (2)0.796 (2)
23vi3.907 (2)3.85 (19)3.431 (2)1.863 (2)
31vi3.645 (2)2.08 (17)3.546 (2)0.844 (2)
32vi3.907 (2)3.85 (19)3.548 (2)1.629 (2)
Table 1

Hydrogen-bond geometry (Å, °)

Cg4 is the centroid of the C18–C23 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W⋯O29i0.85 (3)2.24 (3)3.071 (5)172 (4)
O1W—H2W⋯O280.89 (3)1.99 (3)2.873 (5)176 (8)
C1—H1⋯O1W0.932.513.365 (7)152
C3—H3⋯O29ii0.932.603.298 (5)133
C19—H19⋯O1W0.932.603.415 (7)145
C25—H25A⋯O27iii0.962.533.424 (5)155
C25—H25CCg4ii0.962.643.527 (4)154

Symmetry codes: (i) ; (ii) ; (iii) .

Table 2

C—F⋯π inter­actions (Å,°)

Cg1, Cg2 and Cg3 are the centroids of the C9/N10/C11–C14, C1–C4/C11/C12 and C5–C8/C13/C14 rings, respectively.

XIJIJXJXIJ
C20F24Cg2iv3.743 (3)4.139 (5)97.6 (2)
C20F24Cg2v3.854 (4)4.188 (5)94.9 (3)
C30F31Cg1v3.665 (4)4.519 (6)123.6 (3)
C30F31Cg3v3.910 (4)4.049 (6)86.7 (3)
C30F33Cg3v3.654 (4)4.049 (6)97.7 (3)

Symmetry codes: (iv) x − 1, y, z; (v) −x + 1, −y + 2, −z + 1.

Table 3

π–π inter­actions (Å,°)

Cg1, Cg2 and Cg3 are as defined in Table 2. CgI⋯CgJ is the distance between ring centroids. The dihedral angle is that between the planes of the rings I and J. CgI Perp is the perpendicular distance of CgI from ring J. CgI Offset is the distance between CgI and the perpendicular projection of CgJ on ring I.

IJCgICgJDihedral angleCgIPerpCgIOffset
11vi3.990 (2) 3.591 (2)1.739 (2)
13vi3.645 (2)2.08 (17)3.557 (2)0.796 (2)
23vi3.907 (2)3.85 (19)3.431 (2)1.863 (2)
31vi3.645 (2)2.08 (17)3.546 (2)0.844 (2)
32vi3.907 (2)3.85 (19)3.548 (2)1.629 (2)

Symmetry code: (vi) −x + 1, −y + 1, −z.

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Authors:  Aldo Roda; Massimo Guarigli; Elisa Michelini; Mara Mirasoli; Patrizia Pasini
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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-09

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