Literature DB >> 22412467

Tris(tetra-butyl-ammonium) hexa-kis-(tert-butane-thiol-ato-κS)hepta-μ(3)-chlorido-μ(3)-sulfido-hexa-molybdate dihydrate.

Pavel A Petrov1, Dmitry Yu Naumov, Sergey N Konchenko.   

Abstract

The octa-hedral cluster core of the anion in the structure of the title compound, (C(16)H(36)N)(3)[Mo(6)(C(4)H(9)S)(6)(μ(3)-Cl)(7)(μ(3)-S)]·2H(2)O, has -3 site symmetry. Two μ(3)-Cl atoms fully occupy positions in the cluster core, while the remaining six positions are statistically occupied by Cl and S atoms in a 1:5 ratio. The fully occupied Cl-atom positions are located on sites with 3 symmetry, and the N atom of tetra-butyl-ammonium cation is located on a site with 2 symmetry. The structure contains also two disordered solvent water mol-ecules, one of which is located on a threefold rotation axis and the other in a general position, both with an occupancy of 0.25. The water mol-ecules are localized in cavities formed by the tetra-butyl-ammonium cations and the tert-butane-thiol-ate groups. The metal clusters are stacked in a cubic close packing arrangement along [001].

Entities:  

Year:  2012        PMID: 22412467      PMCID: PMC3297277          DOI: 10.1107/S1600536812007416

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a review of octa­hedral halogen-bridged metal clusters, see: Prokopuk & Shryver (1998 ▶). For synthesis and structures of related halogen/chalcogen clusters, see: Abramov et al. (2009 ▶); Ebihara et al. (1988 ▶); Ebihara, Imai et al. (1995 ▶); Ebihara, Toriumi et al. (1995 ▶); Michel & McCarley (1982 ▶); Nocera & Gray (1984 ▶). For a related transformation of tBuS−, see: Petrov et al. (2010 ▶). For synthesis and structures of related clusters with sulfur-substituted halogen atoms, see: Schoonover et al. (1996 ▶); Szczepura et al. (2008 ▶).

Experimental

Crystal data

(C16H36N)3[Mo6(C4H9S)6Cl7S]·2H2O M = 2154.29 Trigonal, a = 18.7481 (5) Å c = 52.4233 (12) Å V = 15957.7 (7) Å3 Z = 6 Mo Kα radiation μ = 1.04 mm−1 T = 150 K 0.42 × 0.35 × 0.23 mm

Data collection

Bruker–Nonius X8 APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.670, T max = 0.797 36925 measured reflections 3637 independent reflections 3092 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.125 S = 1.14 3637 reflections 161 parameters 12 restraints H-atom parameters constrained Δρmax = 1.16 e Å−3 Δρmin = −0.76 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶), Mercury (Macrae et al., 2006 ▶) and POV-RAY (Persistence of Vision, 2004 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812007416/wm2589sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812007416/wm2589Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C16H36N)3[Mo6(C4H9S)6Cl7S]·2H2ODx = 1.345 Mg m3
Mr = 2154.29Mo Kα radiation, λ = 0.71073 Å
Trigonal, R3cCell parameters from 9844 reflections
Hall symbol: -R 3 2"cθ = 2.5–28.3°
a = 18.7481 (5) ŵ = 1.04 mm1
c = 52.4233 (12) ÅT = 150 K
V = 15957.7 (7) Å3Prism, brown
Z = 60.42 × 0.35 × 0.23 mm
F(000) = 6708
Bruker–Nonius X8 APEX CCD diffractometer3637 independent reflections
Radiation source: fine-focus sealed tube3092 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.034
Detector resolution: 25 pixels mm-1θmax = 26.4°, θmin = 2.2°
φ scansh = −23→23
Absorption correction: multi-scan (SADABS; Bruker, 2004)k = −23→22
Tmin = 0.670, Tmax = 0.797l = −65→55
36925 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.125H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0654P)2 + 69.7786P] where P = (Fo2 + 2Fc2)/3
3637 reflections(Δ/σ)max < 0.001
161 parametersΔρmax = 1.16 e Å3
12 restraintsΔρmin = −0.76 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.Hydrogen atoms of water molecules are not located. One of water molecules is disodered by two positions. Hydrogen atoms of cation and anion are placed geometrically.
xyzUiso*/UeqOcc. (<1)
Mo10.093280 (16)0.039723 (17)0.020197 (5)0.02512 (13)
Cl10.00000.00000.05819 (2)0.0298 (3)
Cl20.07472 (5)−0.10085 (5)0.019692 (16)0.0374 (2)0.8333333
S10.21632 (6)0.09894 (7)0.049357 (18)0.0458 (3)
S20.07472 (5)−0.10085 (5)0.019692 (16)0.0374 (2)0.1666667
O2W0.5911 (10)0.3102 (13)0.0925 (4)0.103 (6)0.25
N10.2617 (3)0.33330.08330.0555 (12)
C10.3076 (2)0.0927 (3)0.03926 (8)0.0478 (9)
C20.3649 (4)0.1194 (6)0.06188 (11)0.107 (3)
H2A0.41280.11370.05780.161*
H2B0.33590.08480.07660.161*
H2C0.38310.17710.06590.161*
C30.2844 (4)0.0089 (4)0.02944 (17)0.111 (3)
H3A0.2454−0.00540.01530.167*
H3B0.2587−0.03160.04320.167*
H3C0.33390.00890.02340.167*
C40.3539 (4)0.1528 (5)0.01793 (13)0.099 (2)
H4A0.37310.20910.02380.148*
H4B0.31720.14080.00330.148*
H4C0.40130.14730.01290.148*
C110.3094 (3)0.3354 (3)0.10717 (8)0.0559 (11)
H11A0.36200.38830.10750.067*
H11B0.27730.33420.12230.067*
C120.3281 (3)0.2659 (3)0.10940 (9)0.0669 (13)
H12A0.27610.21260.10780.080*
H12B0.36450.26970.09520.080*
C130.3688 (4)0.2676 (3)0.13419 (10)0.0809 (16)
H13A0.33140.26200.14840.097*
H13B0.41950.32180.13600.097*
C140.3909 (4)0.2012 (4)0.13669 (13)0.0886 (18)
H14A0.34050.14730.13690.133*
H14B0.42140.20900.15260.133*
H14C0.42520.20400.12220.133*
C210.2550 (3)0.4108 (3)0.08358 (10)0.0649 (13)
H21A0.31080.45870.08620.078*
H21B0.22120.40810.09840.078*
C220.2179 (5)0.4266 (4)0.05962 (15)0.107 (3)
H22A0.24720.42290.04440.128*
H22B0.15950.38280.05820.128*
C230.2222 (4)0.5059 (4)0.05953 (12)0.0854 (17)
H23A0.28080.54940.06060.102*
H23B0.19420.50990.07500.102*
C240.1854 (6)0.5224 (5)0.03716 (18)0.136 (4)
H24A0.20260.50590.02160.204*
H24B0.20390.58140.03640.204*
H24C0.12520.49100.03860.204*
O1W0.66670.33330.0468 (7)0.095 (8)0.25
U11U22U33U12U13U23
Mo10.02590 (17)0.02668 (17)0.02253 (19)0.01297 (12)−0.00049 (9)−0.00092 (9)
Cl10.0327 (4)0.0327 (4)0.0241 (6)0.0163 (2)0.0000.000
Cl20.0400 (4)0.0387 (4)0.0356 (4)0.0212 (4)−0.0011 (3)0.0002 (3)
S10.0345 (5)0.0652 (6)0.0409 (5)0.0273 (4)−0.0101 (4)−0.0199 (4)
S20.0400 (4)0.0387 (4)0.0356 (4)0.0212 (4)−0.0011 (3)0.0002 (3)
O2W0.049 (7)0.116 (10)0.122 (10)0.024 (6)0.007 (6)0.007 (7)
N10.060 (2)0.051 (3)0.052 (3)0.0254 (14)−0.0121 (11)−0.024 (2)
C10.0364 (19)0.054 (2)0.057 (2)0.0256 (18)−0.0009 (17)−0.0042 (18)
C20.061 (3)0.210 (8)0.076 (4)0.086 (5)−0.021 (3)−0.020 (4)
C30.061 (3)0.066 (4)0.219 (8)0.040 (3)0.019 (4)−0.011 (4)
C40.055 (3)0.126 (6)0.100 (5)0.034 (4)0.019 (3)0.031 (4)
C110.062 (3)0.056 (3)0.044 (2)0.024 (2)−0.0055 (19)−0.0146 (18)
C120.082 (3)0.063 (3)0.058 (3)0.039 (3)−0.011 (2)−0.015 (2)
C130.110 (5)0.063 (3)0.063 (3)0.038 (3)−0.013 (3)−0.002 (2)
C140.100 (5)0.088 (4)0.082 (4)0.050 (4)−0.012 (3)0.009 (3)
C210.061 (3)0.057 (3)0.075 (3)0.028 (2)−0.019 (2)−0.033 (2)
C220.131 (6)0.086 (4)0.122 (5)0.070 (4)−0.078 (5)−0.058 (4)
C230.086 (4)0.081 (4)0.094 (4)0.045 (3)−0.018 (3)−0.026 (3)
C240.157 (8)0.091 (5)0.181 (8)0.078 (5)−0.083 (7)−0.039 (5)
O1W0.086 (8)0.086 (8)0.113 (12)0.043 (4)0.0000.000
Mo1—Mo1i2.6067 (4)C3—H3C0.9800
Mo1—Mo1ii2.6067 (4)C4—H4A0.9800
Mo1—Mo1iii2.6328 (5)C4—H4B0.9800
Mo1—Mo1iv2.6328 (5)C4—H4C0.9800
Mo1—S12.5158 (9)C11—C121.515 (7)
Mo1—S2iv2.4792 (9)C11—H11A0.9900
Mo1—S2ii2.4842 (9)C11—H11B0.9900
Mo1—Cl12.5054 (10)C12—C131.500 (7)
Mo1—Cl22.4801 (9)C12—H12A0.9900
Mo1—Cl2iv2.4792 (9)C12—H12B0.9900
Mo1—Cl2ii2.4842 (9)C13—C141.501 (8)
Cl1—Mo1iii2.5054 (10)C13—H13A0.9900
Cl1—Mo1iv2.5054 (10)C13—H13B0.9900
Cl2—Mo1iii2.4792 (9)C14—H14A0.9800
Cl2—Mo1i2.4842 (9)C14—H14B0.9800
S1—C11.849 (4)C14—H14C0.9800
O2W—O2Wv1.22 (4)C21—C221.535 (8)
N1—C21v1.520 (5)C21—H21A0.9900
N1—C211.520 (5)C21—H21B0.9900
N1—C11v1.525 (5)C22—C231.448 (8)
N1—C111.525 (5)C22—H22A0.9900
C1—C31.497 (7)C22—H22B0.9900
C1—C21.508 (6)C23—C241.470 (9)
C1—C41.515 (7)C23—H23A0.9900
C2—H2A0.9800C23—H23B0.9900
C2—H2B0.9800C24—H24A0.9800
C2—H2C0.9800C24—H24B0.9800
C3—H3A0.9800C24—H24C0.9800
C3—H3B0.9800
S2iv—Mo1—Cl2iv0.00 (5)C2—C1—C4106.6 (5)
S2iv—Mo1—Cl2175.69 (3)C3—C1—S1111.9 (3)
Cl2iv—Mo1—Cl2175.69 (3)C2—C1—S1106.4 (3)
S2iv—Mo1—S2ii90.61 (2)C4—C1—S1111.6 (4)
Cl2iv—Mo1—S2ii90.61 (2)C1—C2—H2A109.5
Cl2—Mo1—S2ii90.59 (2)C1—C2—H2B109.5
S2iv—Mo1—Cl2ii90.61 (2)H2A—C2—H2B109.5
Cl2iv—Mo1—Cl2ii90.61 (2)C1—C2—H2C109.5
Cl2—Mo1—Cl2ii90.59 (2)H2A—C2—H2C109.5
S2ii—Mo1—Cl2ii0.00 (5)H2B—C2—H2C109.5
S2iv—Mo1—Cl189.24 (2)C1—C3—H3A109.5
Cl2iv—Mo1—Cl189.24 (2)C1—C3—H3B109.5
Cl2—Mo1—Cl189.22 (2)H3A—C3—H3B109.5
S2ii—Mo1—Cl1175.32 (3)C1—C3—H3C109.5
Cl2ii—Mo1—Cl1175.32 (3)H3A—C3—H3C109.5
S2iv—Mo1—S189.10 (3)H3B—C3—H3C109.5
Cl2iv—Mo1—S189.10 (3)C1—C4—H4A109.5
Cl2—Mo1—S194.93 (3)C1—C4—H4B109.5
S2ii—Mo1—S194.79 (3)H4A—C4—H4B109.5
Cl2ii—Mo1—S194.79 (3)C1—C4—H4C109.5
Cl1—Mo1—S189.88 (3)H4A—C4—H4C109.5
S2iv—Mo1—Mo1i119.05 (2)H4B—C4—H4C109.5
Cl2iv—Mo1—Mo1i119.05 (2)C12—C11—N1115.2 (3)
Cl2—Mo1—Mo1i58.40 (2)C12—C11—H11A108.5
S2ii—Mo1—Mo1i58.22 (2)N1—C11—H11A108.5
Cl2ii—Mo1—Mo1i58.22 (2)C12—C11—H11B108.5
Cl1—Mo1—Mo1i117.960 (18)N1—C11—H11B108.5
S1—Mo1—Mo1i138.62 (2)H11A—C11—H11B107.5
S2iv—Mo1—Mo1ii58.41 (2)C13—C12—C11112.5 (4)
Cl2iv—Mo1—Mo1ii58.41 (2)C13—C12—H12A109.1
Cl2—Mo1—Mo1ii119.04 (2)C11—C12—H12A109.1
S2ii—Mo1—Mo1ii58.25 (2)C13—C12—H12B109.1
Cl2ii—Mo1—Mo1ii58.25 (2)C11—C12—H12B109.1
Cl1—Mo1—Mo1ii117.960 (17)H12A—C12—H12B107.8
S1—Mo1—Mo1ii134.36 (3)C12—C13—C14114.0 (5)
Mo1i—Mo1—Mo1ii60.665 (13)C12—C13—H13A108.8
S2iv—Mo1—Mo1iii117.95 (2)C14—C13—H13A108.8
Cl2iv—Mo1—Mo1iii117.95 (2)C12—C13—H13B108.8
Cl2—Mo1—Mo1iii57.92 (2)C14—C13—H13B108.8
S2ii—Mo1—Mo1iii117.86 (2)H13A—C13—H13B107.7
Cl2ii—Mo1—Mo1iii117.86 (2)C13—C14—H14A109.5
Cl1—Mo1—Mo1iii58.302 (15)C13—C14—H14B109.5
S1—Mo1—Mo1iii135.38 (3)H14A—C14—H14B109.5
Mo1i—Mo1—Mo1iii59.667 (7)C13—C14—H14C109.5
Mo1ii—Mo1—Mo1iii90.0H14A—C14—H14C109.5
S2iv—Mo1—Mo1iv57.95 (2)H14B—C14—H14C109.5
Cl2iv—Mo1—Mo1iv57.95 (2)N1—C21—C22116.1 (4)
Cl2—Mo1—Mo1iv117.91 (2)N1—C21—H21A108.3
S2ii—Mo1—Mo1iv117.89 (2)C22—C21—H21A108.3
Cl2ii—Mo1—Mo1iv117.89 (2)N1—C21—H21B108.3
Cl1—Mo1—Mo1iv58.302 (15)C22—C21—H21B108.3
S1—Mo1—Mo1iv131.38 (2)H21A—C21—H21B107.4
Mo1i—Mo1—Mo1iv90.0C23—C22—C21113.7 (5)
Mo1ii—Mo1—Mo1iv59.667 (7)C23—C22—H22A108.8
Mo1iii—Mo1—Mo1iv60.0C21—C22—H22A108.8
Mo1iii—Cl1—Mo1iv63.40 (3)C23—C22—H22B108.8
Mo1iii—Cl1—Mo163.40 (3)C21—C22—H22B108.8
Mo1iv—Cl1—Mo163.40 (3)H22A—C22—H22B107.7
Mo1iii—Cl2—Mo164.13 (2)C22—C23—C24115.3 (5)
Mo1iii—Cl2—Mo1i63.36 (2)C22—C23—H23A108.4
Mo1—Cl2—Mo1i63.35 (2)C24—C23—H23A108.4
C1—S1—Mo1118.11 (13)C22—C23—H23B108.4
C21v—N1—C21111.8 (5)C24—C23—H23B108.4
C21v—N1—C11v107.2 (2)H23A—C23—H23B107.5
C21—N1—C11v110.3 (3)C23—C24—H24A109.5
C21v—N1—C11110.3 (3)C23—C24—H24B109.5
C21—N1—C11107.2 (2)H24A—C24—H24B109.5
C11v—N1—C11110.1 (5)C23—C24—H24C109.5
C3—C1—C2113.8 (5)H24A—C24—H24C109.5
C3—C1—C4106.5 (5)H24B—C24—H24C109.5
Table 1

Selected bond lengths (Å)

Mo1—Mo1i2.6067 (4)
Mo1—Mo1ii2.6328 (5)
Mo1—S12.5158 (9)
Mo1—S2iii2.4792 (9)
Mo1—S2iv2.4842 (9)
Mo1—Cl12.5054 (10)
Mo1—Cl22.4801 (9)
Mo1—Cl2iii2.4792 (9)
Mo1—Cl2iv2.4842 (9)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  4 in total

1.  Resonance Raman Spectra of [M(6)X(8)Y(6)](2)(-) Cluster Complexes (M = Mo, W; X, Y = Cl, Br, I).

Authors:  Jon R. Schoonover; Thomas C. Zietlow; David L. Clark; Joseph A. Heppert; Malcolm H. Chisholm; Harry B. Gray; Alfred P. Sattelberger; William H. Woodruff
Journal:  Inorg Chem       Date:  1996-10-23       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Unexpected transformation of a diamagnetic Mo3(μ3-S)(μ-S)3 to a paramagnetic Mo3(μ3-S)2(μ-S)3 cluster core by reaction of [Mo3S4(dppe)3Br3]PF6 with (t)BuSNa.

Authors:  Pavel A Petrov; Alexander V Virovets; Antonio Alberola; Rosa Llusar; Sergey N Konchenko
Journal:  Dalton Trans       Date:  2010-08-20       Impact factor: 4.390

4.  Synthesis and study of hexanuclear molybdenum clusters containing thiolate ligands.

Authors:  Lisa F Szczepura; Karen A Ketcham; Betty A Ooro; Julia A Edwards; Jeffrey N Templeton; David L Cedeño; Alan J Jircitano
Journal:  Inorg Chem       Date:  2008-07-23       Impact factor: 5.165

  4 in total

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