Literature DB >> 22412462

μ-4,4'-Bipyridine-bis-[aqua-(4-hy-droxy-pyridine-2,6-dicarboxyl-ato)copper(II)].

Xiao-Li Chen1, Ya-Li Qiao, Lou-Jun Gao, Hua-Li Cui, Mei-Li Zhang.   

Abstract

The title compound, [Cu(2)(C(7)H(3)NO(5))(2)(C(10)H(8)N(2))(H(2)O)(2)], exhibits a centrosymmetric binuclear molecule. Each completely deprotonated 4-hy-droxy-pyridine-2,6-dicarb-oxy-lic acid mol-ecule assumes a tridentate chelating coordination mode. The square-pyramidal coordination geometry around the Cu(II) ion is completed by the bridging bipyridine ligand and an apical water molecule. Adjacent complexes are connected via O-H⋯O and C-H⋯O hydrogen bonds to generate a three-dimensional supra-molecular structure.

Entities:  

Year:  2012        PMID: 22412462      PMCID: PMC3297272          DOI: 10.1107/S1600536812004758

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature on the construction of supra­molecular structures, see: Robin & Fromm (2006 ▶); Desiraju (1989 ▶). For compounds using heterocyclic carb­oxy­lic acids such as pyridine-, pyrazole- and imidazole­carb­oxy­lic acids as building blocks, see: Lin et al. (1998 ▶); Zhao et al. (2003 ▶); Pan et al. (2000 ▶); Liu et al. (2004 ▶); Mahata & Natarajan (2005 ▶); Panagiotis et al. (2005 ▶).

Experimental

Crystal data

[Cu2(C7H3NO5)2(C10H8N2)(H2O)2] M = 681.50 Monoclinic, a = 8.3945 (9) Å b = 18.433 (2) Å c = 7.8686 (10) Å β = 100.044 (2)° V = 1198.9 (2) Å3 Z = 2 Mo Kα radiation μ = 1.85 mm−1 T = 296 K 0.30 × 0.25 × 0.25 mm

Data collection

Bruker SMART 1000 diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.579, T max = 0.629 6528 measured reflections 2433 independent reflections 1972 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.103 S = 1.09 2433 reflections 197 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.44 e Å−3 Δρmin = −0.60 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812004758/ff2054sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812004758/ff2054Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C7H3NO5)2(C10H8N2)(H2O)2]F(000) = 688
Mr = 681.50Dx = 1.888 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2433 reflections
a = 8.3945 (9) Åθ = 2.2–26.4°
b = 18.433 (2) ŵ = 1.85 mm1
c = 7.8686 (10) ÅT = 296 K
β = 100.044 (2)°Prism, blue
V = 1198.9 (2) Å30.30 × 0.25 × 0.25 mm
Z = 2
Bruker SMART 1000 diffractometer2433 independent reflections
Radiation source: fine-focus sealed tube1972 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.041
φ and ω scansθmax = 26.4°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.579, Tmax = 0.629k = −20→23
6528 measured reflectionsl = −8→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.0447P)2] where P = (Fo2 + 2Fc2)/3
2433 reflections(Δ/σ)max = 0.001
197 parametersΔρmax = 0.44 e Å3
2 restraintsΔρmin = −0.60 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.47889 (5)0.38222 (2)0.23311 (6)0.03017 (17)
N10.2865 (3)0.34582 (14)0.2945 (4)0.0261 (6)
N20.6518 (3)0.42601 (15)0.1330 (4)0.0300 (7)
O10.3886 (3)0.47502 (11)0.3063 (3)0.0332 (6)
O20.1826 (3)0.51815 (12)0.4202 (4)0.0377 (7)
O3−0.1274 (3)0.26614 (12)0.4182 (4)0.0463 (8)
H3−0.18580.29840.44430.069*
O40.4981 (3)0.27793 (12)0.1646 (4)0.0386 (7)
O50.3903 (3)0.16954 (12)0.1994 (4)0.0428 (7)
C10.2557 (4)0.46880 (17)0.3631 (5)0.0280 (8)
C20.1880 (4)0.39256 (16)0.3559 (4)0.0245 (7)
C30.0461 (4)0.36900 (17)0.4026 (5)0.0292 (8)
H3A−0.02230.40100.44620.035*
C40.0081 (4)0.29506 (17)0.3821 (5)0.0305 (8)
C50.1158 (4)0.24840 (18)0.3192 (5)0.0318 (8)
H50.09250.19920.30600.038*
C60.2553 (4)0.27552 (17)0.2772 (5)0.0266 (8)
C70.3911 (4)0.23570 (19)0.2084 (5)0.0316 (8)
C80.6991 (4)0.49448 (19)0.1714 (5)0.0369 (9)
H80.63840.52290.23410.044*
C90.8328 (4)0.52411 (18)0.1222 (5)0.0363 (9)
H90.86210.57150.15420.044*
C100.9259 (4)0.48484 (17)0.0252 (4)0.0276 (8)
C110.8717 (4)0.41528 (19)−0.0187 (5)0.0377 (10)
H110.92750.3867−0.08610.045*
C120.7374 (5)0.38763 (18)0.0353 (5)0.0399 (10)
H120.70440.34070.00300.048*
O60.6528 (3)0.35779 (13)0.5027 (4)0.0359 (6)
H6A0.689 (4)0.3975 (13)0.543 (5)0.043*
H6B0.593 (4)0.3429 (19)0.564 (4)0.043*
U11U22U33U12U13U23
Cu10.0234 (3)0.0274 (3)0.0441 (3)−0.00220 (18)0.0182 (2)−0.00282 (19)
N10.0228 (15)0.0241 (14)0.0344 (17)0.0011 (12)0.0136 (13)−0.0017 (13)
N20.0243 (15)0.0311 (16)0.0384 (18)0.0006 (12)0.0161 (14)0.0009 (13)
O10.0278 (13)0.0223 (12)0.0547 (17)−0.0030 (10)0.0215 (12)−0.0014 (11)
O20.0336 (14)0.0254 (13)0.0598 (19)−0.0023 (11)0.0238 (13)−0.0090 (12)
O30.0297 (14)0.0281 (13)0.088 (2)−0.0026 (11)0.0305 (15)0.0064 (15)
O40.0310 (14)0.0336 (14)0.0572 (18)−0.0015 (11)0.0239 (13)−0.0100 (13)
O50.0412 (16)0.0261 (14)0.0638 (19)0.0039 (12)0.0165 (14)−0.0095 (13)
C10.0260 (18)0.0241 (17)0.035 (2)−0.0014 (14)0.0094 (16)−0.0017 (15)
C20.0203 (17)0.0250 (17)0.0291 (19)0.0006 (13)0.0071 (14)−0.0002 (14)
C30.0216 (18)0.0296 (18)0.038 (2)0.0019 (14)0.0108 (16)0.0018 (16)
C40.0226 (18)0.0265 (18)0.044 (2)−0.0029 (14)0.0109 (16)0.0042 (16)
C50.0311 (19)0.0220 (17)0.045 (2)−0.0010 (15)0.0144 (17)0.0022 (16)
C60.0243 (18)0.0223 (17)0.035 (2)0.0001 (14)0.0091 (15)−0.0002 (15)
C70.029 (2)0.034 (2)0.033 (2)0.0039 (16)0.0077 (16)−0.0084 (16)
C80.037 (2)0.0298 (19)0.050 (3)0.0017 (16)0.0242 (19)−0.0058 (18)
C90.037 (2)0.0253 (18)0.051 (2)−0.0088 (16)0.0220 (19)−0.0089 (17)
C100.0269 (19)0.0270 (18)0.032 (2)−0.0004 (15)0.0120 (16)0.0057 (15)
C110.034 (2)0.0312 (19)0.055 (3)−0.0020 (16)0.0280 (19)−0.0057 (18)
C120.040 (2)0.0288 (19)0.057 (3)−0.0072 (17)0.027 (2)−0.0071 (18)
O60.0350 (16)0.0296 (13)0.0482 (18)−0.0092 (11)0.0211 (13)−0.0041 (12)
Cu1—N11.888 (3)C3—C41.403 (4)
Cu1—N21.944 (3)C3—H3A0.9300
Cu1—O11.996 (2)C4—C51.400 (4)
Cu1—O42.011 (2)C5—C61.365 (4)
Cu1—O62.399 (3)C5—H50.9300
N1—C61.324 (4)C6—C71.532 (4)
N1—C21.341 (4)C8—C91.363 (4)
N2—C121.342 (4)C8—H80.9300
N2—C81.342 (4)C9—C101.388 (4)
O1—C11.277 (4)C9—H90.9300
O2—C11.226 (4)C10—C111.384 (5)
O3—C41.330 (4)C10—C10i1.480 (6)
O3—H30.8200C11—C121.370 (5)
O4—C71.280 (4)C11—H110.9300
O5—C71.222 (4)C12—H120.9300
C1—C21.513 (4)O6—H6A0.834 (18)
C2—C31.377 (4)O6—H6B0.804 (18)
N1—Cu1—N2169.74 (13)O3—C4—C3123.4 (3)
N1—Cu1—O181.12 (10)C5—C4—C3119.3 (3)
N2—Cu1—O196.27 (10)C6—C5—C4119.7 (3)
N1—Cu1—O480.85 (10)C6—C5—H5120.2
N2—Cu1—O4100.83 (10)C4—C5—H5120.2
O1—Cu1—O4161.60 (9)N1—C6—C5119.7 (3)
N1—Cu1—O697.05 (10)N1—C6—C7111.0 (3)
N2—Cu1—O693.09 (10)C5—C6—C7129.2 (3)
O1—Cu1—O696.24 (10)O5—C7—O4126.0 (3)
O4—Cu1—O689.58 (10)O5—C7—C6120.1 (3)
C6—N1—C2122.8 (3)O4—C7—C6113.8 (3)
C6—N1—Cu1119.0 (2)N2—C8—C9122.6 (3)
C2—N1—Cu1118.2 (2)N2—C8—H8118.7
C12—N2—C8117.3 (3)C9—C8—H8118.7
C12—N2—Cu1121.7 (2)C8—C9—C10121.2 (3)
C8—N2—Cu1120.8 (2)C8—C9—H9119.4
C1—O1—Cu1115.01 (19)C10—C9—H9119.4
C4—O3—H3109.5C11—C10—C9115.4 (3)
C7—O4—Cu1114.6 (2)C11—C10—C10i122.6 (4)
O2—C1—O1125.8 (3)C9—C10—C10i122.1 (4)
O2—C1—C2119.6 (3)C12—C11—C10121.3 (3)
O1—C1—C2114.6 (3)C12—C11—H11119.3
N1—C2—C3120.7 (3)C10—C11—H11119.3
N1—C2—C1111.0 (3)N2—C12—C11122.2 (3)
C3—C2—C1128.3 (3)N2—C12—H12118.9
C2—C3—C4117.8 (3)C11—C12—H12118.9
C2—C3—H3A121.1Cu1—O6—H6A107 (3)
C4—C3—H3A121.1Cu1—O6—H6B104 (3)
O3—C4—C5117.3 (3)H6A—O6—H6B107 (4)
N2—Cu1—N1—C6103.6 (6)O1—C1—C2—N11.8 (5)
O1—Cu1—N1—C6179.6 (3)O2—C1—C2—C31.9 (6)
O4—Cu1—N1—C63.3 (3)O1—C1—C2—C3−178.0 (3)
O6—Cu1—N1—C6−85.2 (3)N1—C2—C3—C4−0.5 (5)
N2—Cu1—N1—C2−77.2 (7)C1—C2—C3—C4179.2 (3)
O1—Cu1—N1—C2−1.2 (3)C2—C3—C4—O3−178.2 (3)
O4—Cu1—N1—C2−177.5 (3)C2—C3—C4—C51.2 (5)
O6—Cu1—N1—C294.1 (3)O3—C4—C5—C6178.9 (3)
N1—Cu1—N2—C12−93.6 (7)C3—C4—C5—C6−0.6 (6)
O1—Cu1—N2—C12−168.3 (3)C2—N1—C6—C51.6 (5)
O4—Cu1—N2—C124.9 (3)Cu1—N1—C6—C5−179.3 (3)
O6—Cu1—N2—C1295.1 (3)C2—N1—C6—C7−178.6 (3)
N1—Cu1—N2—C892.1 (7)Cu1—N1—C6—C70.6 (4)
O1—Cu1—N2—C817.4 (3)C4—C5—C6—N1−0.8 (5)
O4—Cu1—N2—C8−169.4 (3)C4—C5—C6—C7179.4 (4)
O6—Cu1—N2—C8−79.2 (3)Cu1—O4—C7—O5−170.6 (3)
N1—Cu1—O1—C12.3 (3)Cu1—O4—C7—C69.4 (4)
N2—Cu1—O1—C1172.2 (3)N1—C6—C7—O5173.3 (3)
O4—Cu1—O1—C113.9 (5)C5—C6—C7—O5−6.9 (6)
O6—Cu1—O1—C1−93.9 (3)N1—C6—C7—O4−6.8 (5)
N1—Cu1—O4—C7−7.3 (3)C5—C6—C7—O4173.1 (4)
N2—Cu1—O4—C7−177.1 (3)C12—N2—C8—C9−3.2 (6)
O1—Cu1—O4—C7−19.0 (5)Cu1—N2—C8—C9171.4 (3)
O6—Cu1—O4—C789.9 (3)N2—C8—C9—C101.5 (6)
Cu1—O1—C1—O2177.3 (3)C8—C9—C10—C111.0 (6)
Cu1—O1—C1—C2−2.8 (4)C8—C9—C10—C10i−178.2 (4)
C6—N1—C2—C3−0.9 (5)C9—C10—C11—C12−1.6 (6)
Cu1—N1—C2—C3179.9 (3)C10i—C10—C11—C12177.5 (4)
C6—N1—C2—C1179.3 (3)C8—N2—C12—C112.5 (6)
Cu1—N1—C2—C10.1 (4)Cu1—N2—C12—C11−172.0 (3)
O2—C1—C2—N1−178.2 (3)C10—C11—C12—N2−0.1 (6)
D—H···AD—HH···AD···AD—H···A
O3—H3···O6ii0.821.862.670 (3)169
O6—H6B···O4iii0.80 (2)2.54 (3)3.185 (3)139 (3)
O6—H6B···O5iii0.80 (2)2.17 (2)2.948 (3)163 (4)
C12—H12···O3iv0.932.583.246 (4)129
C8—H8···O10.932.433.003 (4)120
C12—H12···O40.932.593.142 (4)118
Table 1

Selected bond lengths (Å)

Cu1—N11.888 (3)
Cu1—N21.944 (3)
Cu1—O11.996 (2)
Cu1—O42.011 (2)
Cu1—O62.399 (3)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O6i0.821.862.670 (3)169
O6—H6B⋯O4ii0.80 (2)2.54 (3)3.185 (3)139 (3)
O6—H6B⋯O5ii0.80 (2)2.17 (2)2.948 (3)163 (4)
C12—H12⋯O3iii0.932.583.246 (4)129
C8—H8⋯O10.932.433.003 (4)120
C12—H12⋯O40.932.593.142 (4)118

Symmetry codes: (i) ; (ii) ; (iii) .

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