Literature DB >> 22412449

Bis(μ(2)-4,7-dimethyl-4,7-diazadecane-1,10-dithiolato)trinickel(II) bis(perchlorate).

Masakazu Hirotsu, Naoto Kuwamura, Isamu Kinoshita, Masaaki Kojima, Yuzo Yoshikawa.   

Abstract

In the title compound, [Ni(3)(C(10)H(22)n class="Chemical">N(2)S(2))(2)](ClO(4))(2), the complex cation consists of a nickel(II) ion and two [Ni(C(10)H(22)N(2)S(2))] units with an N(2)S(2) tetra-dentate ligand, 3,3'-[1,2-ethane-diylbis(methyl-imino)]bis-(1-propane-thiol-ate). The central Ni(II) ion is located on a crystallographic inversion centre and is bound to the four S atoms of the two [Ni(C(10)H(22)N(2)S(2))] units to form a linear sulfur-bridged trimetallic moiety. The dihedral angle between the central NiS(4) plane and the terminal NiN(2)S(2) plane is 145.71 (5)°. In the [Ni(C(10)H(22)N(2)S(2))] unit, the two methyl groups on the chelating N atoms are cis to each other, and the two six-membered N,S-chelate rings adopt a chair conformation. The Ni-S bond lengths and the S-Ni-S bite angles in the central NiS(4) group are similar to those in the [Ni(C(10)H(22)N(2)S(2))] unit.

Entities:  

Year:  2012        PMID: 22412449      PMCID: PMC3297259          DOI: 10.1107/S1600536812006034

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Konno et al. (2000 ▶); Konno (2004 ▶); Igashira-Kamiyama & Konno (2011 ▶). For related structures, see: Grapperhaus et al. (2007 ▶); Turner et al. (1990 ▶).

Experimental

Crystal data

[Ni3(C10H22N2S2)2](ClO4)2 M = 843.83 Monoclinic, a = 8.0253 (19) Å b = 16.208 (4) Å c = 12.807 (3) Å β = 105.033 (6)° V = 1608.8 (7) Å3 Z = 2 Mo Kα radiation μ = 2.21 mm−1 T = 123 K 0.24 × 0.24 × 0.17 mm

Data collection

Rigaku AFC7 (Mercury CCD) diffractometer Absorption correction: multi-scan (REQAB; Jacobson 1998 ▶) T min = 0.619, T max = 0.705 15030 measured reflections 3626 independent reflections 3391 reflections with F 2 > 2.0σ(F 2) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.082 S = 1.04 3626 reflections 235 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.71 e Å−3 Δρmin = −0.70 e Å−3 Data collection: CrystalClear (Rigaku, 2007 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812006034/fj2508sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812006034/fj2508Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni3(C10H22N2S2)2](ClO4)2F(000) = 876.00
Mr = 843.83Dx = 1.742 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ybcCell parameters from 7222 reflections
a = 8.0253 (19) Åθ = 4.1–27.5°
b = 16.208 (4) ŵ = 2.21 mm1
c = 12.807 (3) ÅT = 123 K
β = 105.033 (6)°Prism, red
V = 1608.8 (7) Å30.24 × 0.24 × 0.17 mm
Z = 2
Rigaku AFC7 (Mercury CCD) diffractometer3626 independent reflections
Radiation source: rotating anode X-ray tube3391 reflections with F2 > 2.0σ(F2)
Graphite monochromatorRint = 0.027
Detector resolution: 7.31 pixels mm-1θmax = 27.5°, θmin = 4.1°
ω scansh = −10→10
Absorption correction: multi-scan (REQAB; Jacobson, 1998)k = −21→20
Tmin = 0.619, Tmax = 0.705l = −13→16
15030 measured reflections
Refinement on F20 restraints
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.035w = 1/[σ2(Fo2) + (0.0319P)2 + 3.9221P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.082(Δ/σ)max = 0.002
S = 1.04Δρmax = 1.71 e Å3
3626 reflectionsΔρmin = −0.70 e Å3
235 parameters
Refinement. Refinement was performed using all reflections. The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt).
xyzUiso*/Ueq
Ni10.04531 (4)0.626726 (19)0.82272 (2)0.01439 (10)
Ni20.00000.50001.00000.01306 (11)
Cl10.28814 (8)0.39140 (4)0.71998 (5)0.02463 (15)
S1−0.16594 (8)0.55517 (4)0.85310 (5)0.01655 (13)
S20.14612 (8)0.61385 (4)0.99699 (5)0.01539 (13)
O10.2236 (4)0.4191 (2)0.8082 (2)0.0720 (11)
O20.4299 (3)0.33683 (14)0.76150 (19)0.0357 (5)
O30.1505 (3)0.35038 (17)0.64509 (18)0.0431 (6)
O40.3425 (4)0.46058 (19)0.6684 (3)0.0680 (10)
N1−0.0478 (3)0.63136 (14)0.66462 (17)0.0224 (5)
N20.2398 (3)0.69848 (15)0.80846 (18)0.0228 (5)
C1−0.2110 (4)0.47418 (18)0.7507 (2)0.0241 (6)
C2−0.2552 (4)0.5093 (2)0.6370 (2)0.0286 (6)
C3−0.1047 (4)0.55199 (17)0.6077 (2)0.0222 (5)
C40.3641 (3)0.57575 (18)1.0035 (2)0.0212 (5)
C50.4731 (4)0.63872 (18)0.9633 (2)0.0225 (5)
C60.4124 (3)0.65719 (17)0.8436 (2)0.0202 (5)
C70.1093 (5)0.6568 (3)0.6256 (3)0.0433 (9)
C80.2043 (5)0.7223 (3)0.6932 (3)0.0433 (9)
C9−0.1854 (6)0.6932 (2)0.6355 (3)0.0478 (10)
C100.2471 (4)0.77787 (18)0.8711 (3)0.0356 (7)
H1A−0.308 (5)0.443 (2)0.762 (3)0.030 (9)*
H1B−0.117 (5)0.443 (2)0.759 (3)0.028 (9)*
H2A−0.353 (4)0.549 (2)0.629 (3)0.023 (8)*
H2B−0.284 (5)0.464 (2)0.587 (3)0.038 (10)*
H3A−0.127 (5)0.562 (2)0.530 (3)0.033 (9)*
H3B−0.005 (4)0.514 (2)0.624 (3)0.024 (8)*
H4A0.413 (4)0.562 (2)1.076 (3)0.027 (8)*
H4B0.353 (4)0.526 (2)0.960 (3)0.022 (8)*
H5A0.477 (4)0.688 (2)1.004 (2)0.017 (7)*
H5B0.589 (5)0.617 (2)0.974 (3)0.027 (9)*
H6A0.498 (4)0.6915 (19)0.822 (2)0.020 (7)*
H6B0.403 (4)0.6070 (19)0.800 (2)0.017 (7)*
H7A0.18580.60860.62780.052*
H7B0.07110.67620.54970.052*
H8A0.13590.77390.68060.052*
H8B0.31430.73250.67400.052*
H9A−0.14600.74490.67350.072*
H9B−0.28760.67320.65620.072*
H9C−0.21460.70280.55730.072*
H10A0.27030.76550.94850.053*
H10B0.13640.80670.84720.053*
H10C0.33930.81300.85840.053*
U11U22U33U12U13U23
Ni10.01653 (17)0.01475 (17)0.01300 (16)0.00004 (11)0.00584 (12)0.00248 (11)
Ni20.0134 (2)0.0146 (2)0.0115 (2)−0.00204 (16)0.00396 (15)0.00100 (15)
Cl10.0182 (3)0.0289 (3)0.0237 (3)0.0002 (2)−0.0003 (2)−0.0014 (3)
S10.0151 (3)0.0209 (3)0.0145 (3)0.0007 (2)0.0053 (2)0.0034 (2)
S20.0182 (3)0.0161 (3)0.0133 (3)−0.0033 (2)0.0064 (2)−0.0009 (2)
O10.0498 (17)0.120 (3)0.0414 (15)0.0461 (19)0.0037 (13)−0.0256 (17)
O20.0267 (11)0.0350 (12)0.0436 (13)0.0125 (9)0.0061 (9)−0.0016 (10)
O30.0362 (13)0.0549 (15)0.0302 (12)−0.0205 (12)−0.0056 (10)0.0011 (11)
O40.0394 (15)0.0534 (17)0.098 (2)−0.0159 (13)−0.0057 (15)0.0363 (17)
N10.0326 (13)0.0209 (11)0.0140 (10)−0.0057 (9)0.0066 (9)0.0031 (8)
N20.0195 (11)0.0279 (12)0.0220 (11)0.0008 (9)0.0071 (9)0.0125 (9)
C10.0269 (15)0.0270 (14)0.0168 (12)−0.0116 (12)0.0028 (10)0.0000 (11)
C20.0315 (16)0.0348 (16)0.0161 (12)−0.0104 (13)0.0001 (11)0.0015 (12)
C30.0282 (14)0.0242 (14)0.0146 (11)0.0002 (11)0.0065 (10)0.0005 (10)
C40.0160 (12)0.0272 (14)0.0194 (12)−0.0016 (10)0.0028 (10)0.0074 (11)
C50.0178 (13)0.0273 (14)0.0221 (13)−0.0043 (11)0.0045 (10)0.0030 (11)
C60.0194 (13)0.0225 (13)0.0210 (12)−0.0005 (10)0.0095 (10)0.0016 (10)
C70.052 (2)0.055 (2)0.0265 (15)−0.0176 (18)0.0173 (15)0.0042 (15)
C80.0329 (17)0.068 (2)0.0264 (15)−0.0106 (17)0.0029 (13)0.0233 (16)
C90.076 (3)0.0329 (18)0.0271 (16)0.0233 (18)−0.0007 (16)0.0034 (14)
C100.0289 (16)0.0184 (14)0.064 (2)−0.0007 (12)0.0207 (15)0.0058 (14)
Ni1—N11.969 (2)C4—H4B0.98 (3)
Ni1—N21.993 (2)C5—C61.513 (4)
Ni1—S12.1709 (8)C5—H5A0.95 (3)
Ni1—S22.1777 (8)C5—H5B0.97 (4)
Ni2—S12.1938 (7)C6—N21.498 (3)
Ni2—S22.1921 (7)C6—H6A0.98 (3)
Cl1—O11.432 (3)C6—H6B0.98 (3)
Cl1—O21.430 (2)C7—C81.454 (5)
Cl1—O31.425 (2)C7—N11.529 (4)
Cl1—O41.426 (3)C7—H7A0.9900
C1—C21.518 (4)C7—H7B0.9900
C1—S11.824 (3)C8—N21.481 (4)
C1—H1A0.97 (4)C8—H8A0.9900
C1—H1B0.89 (4)C8—H8B0.9900
C2—C31.520 (4)C9—N11.466 (4)
C2—H2A1.00 (3)C9—H9A0.9800
C2—H2B0.97 (4)C9—H9B0.9800
C3—N11.491 (3)C9—H9C0.9800
C3—H3A0.98 (4)C10—N21.510 (4)
C3—H3B0.99 (3)C10—H10A0.9800
C4—C51.519 (4)C10—H10B0.9800
C4—S21.836 (3)C10—H10C0.9800
C4—H4A0.94 (3)Ni1—Ni23.1518 (6)
N1—Ni1—N288.90 (9)C3—C2—H2A109.8 (19)
N1—Ni1—S195.68 (7)C1—C2—H2B108 (2)
N2—Ni1—S1174.27 (7)C3—C2—H2B105 (2)
N1—Ni1—S2176.66 (7)H2A—C2—H2B112 (3)
N2—Ni1—S293.34 (7)N1—C3—H3A108 (2)
S1—Ni1—S282.24 (3)C2—C3—H3A112 (2)
S1—Ni2—S281.39 (3)N1—C3—H3B107.9 (19)
S1—Ni2—S2i98.61 (3)C2—C3—H3B108.7 (19)
Ni1—S1—C1105.91 (10)H3A—C3—H3B104 (3)
Ni2—S1—C1106.63 (10)C5—C4—H4A112 (2)
Ni1—S2—C4100.09 (9)S2—C4—H4A106 (2)
Ni2—S2—C4102.93 (9)C5—C4—H4B110.2 (19)
Ni1—S1—Ni292.46 (3)S2—C4—H4B107.8 (19)
Ni1—S2—Ni292.32 (2)H4A—C4—H4B109 (3)
O3—Cl1—O4109.37 (17)C6—C5—H5A110.1 (18)
O3—Cl1—O2111.38 (16)C4—C5—H5A108.8 (18)
O4—Cl1—O2110.42 (16)C6—C5—H5B105 (2)
O3—Cl1—O1107.56 (19)C4—C5—H5B109 (2)
O4—Cl1—O1109.6 (2)H5A—C5—H5B110 (3)
O2—Cl1—O1108.46 (16)N2—C6—H6A108.8 (18)
C2—C1—S1111.9 (2)C5—C6—H6A109.7 (18)
C1—C2—C3113.9 (2)N2—C6—H6B106.0 (18)
N1—C3—C2115.7 (2)C5—C6—H6B111.5 (18)
C5—C4—S2112.6 (2)H6A—C6—H6B105 (2)
C6—C5—C4114.5 (2)C8—C7—H7A109.5
N2—C6—C5115.0 (2)N1—C7—H7A109.5
C8—C7—N1110.6 (3)C8—C7—H7B109.5
C7—C8—N2109.8 (3)N1—C7—H7B109.5
C9—N1—C3110.5 (2)H7A—C7—H7B108.1
C9—N1—C7111.3 (3)C7—C8—H8A109.7
C3—N1—C7104.3 (2)N2—C8—H8A109.7
C9—N1—Ni1110.34 (19)C7—C8—H8B109.7
C3—N1—Ni1117.14 (16)N2—C8—H8B109.7
C7—N1—Ni1102.81 (18)H8A—C8—H8B108.2
C8—N2—C6109.9 (2)N1—C9—H9A109.5
C8—N2—C10106.2 (3)N1—C9—H9B109.5
C6—N2—C10108.4 (2)H9A—C9—H9B109.5
C8—N2—Ni1106.90 (19)N1—C9—H9C109.5
C6—N2—Ni1113.38 (16)H9A—C9—H9C109.5
C10—N2—Ni1111.83 (17)H9B—C9—H9C109.5
C2—C1—H1A110 (2)N2—C10—H10A109.5
S1—C1—H1A106 (2)N2—C10—H10B109.5
C2—C1—H1B108 (2)H10A—C10—H10B109.5
S1—C1—H1B109 (2)N2—C10—H10C109.5
H1A—C1—H1B112 (3)H10A—C10—H10C109.5
C1—C2—H2A108.7 (18)H10B—C10—H10C109.5
S1—C1—C2—C367.6 (3)S1—Ni1—Ni2—S2i37.83 (4)
C1—C2—C3—N1−69.6 (3)S2—Ni1—Ni2—S2i180.0
S2—C4—C5—C6−67.3 (3)N1—Ni1—Ni2—S2177.99 (10)
C4—C5—C6—N265.5 (3)N2—Ni1—Ni2—S230.68 (10)
N1—C7—C8—N251.0 (4)S1—Ni1—Ni2—S2−142.17 (4)
C2—C3—N1—C9−63.8 (3)N1—Ni1—Ni2—S1i140.16 (10)
C2—C3—N1—C7176.5 (3)N2—Ni1—Ni2—S1i−7.16 (10)
C2—C3—N1—Ni163.7 (3)S1—Ni1—Ni2—S1i180.0
C8—C7—N1—C974.6 (4)S2—Ni1—Ni2—S1i−37.83 (4)
C8—C7—N1—C3−166.2 (3)N1—Ni1—Ni2—S1−39.84 (10)
C8—C7—N1—Ni1−43.5 (3)N2—Ni1—Ni2—S1172.84 (10)
C7—C8—N2—C692.5 (3)S2—Ni1—Ni2—S1142.17 (4)
C7—C8—N2—C10−150.5 (3)C2—C1—S1—Ni1−57.8 (2)
C7—C8—N2—Ni1−31.0 (4)C2—C1—S1—Ni2−155.3 (2)
C5—C6—N2—C8173.2 (3)N1—Ni1—S1—C143.83 (13)
C5—C6—N2—C1057.6 (3)S2—Ni1—S1—C1−133.54 (11)
C5—C6—N2—Ni1−67.2 (3)Ni2—Ni1—S1—C1−108.06 (11)
C9—N1—Ni1—N2−98.6 (2)N1—Ni1—S1—Ni2151.89 (7)
C3—N1—Ni1—N2133.8 (2)S2—Ni1—S1—Ni2−25.48 (2)
C7—N1—Ni1—N220.1 (2)S2i—Ni2—S1—C1−47.23 (10)
C9—N1—Ni1—S177.9 (2)S2—Ni2—S1—C1132.77 (10)
C3—N1—Ni1—S1−49.7 (2)Ni1—Ni2—S1—C1107.41 (10)
C7—N1—Ni1—S1−163.34 (19)S2i—Ni2—S1—Ni1−154.64 (2)
C9—N1—Ni1—Ni2104.5 (2)S2—Ni2—S1—Ni125.36 (2)
C3—N1—Ni1—Ni2−23.1 (2)C5—C4—S2—Ni164.9 (2)
C7—N1—Ni1—Ni2−136.74 (18)C5—C4—S2—Ni2159.63 (18)
C8—N2—Ni1—N14.8 (2)N2—Ni1—S2—C4−54.60 (12)
C6—N2—Ni1—N1−116.41 (18)S1—Ni1—S2—C4129.07 (10)
C10—N2—Ni1—N1120.7 (2)Ni2—Ni1—S2—C4103.57 (10)
C8—N2—Ni1—S2−177.6 (2)N2—Ni1—S2—Ni2−158.17 (7)
C6—N2—Ni1—S261.11 (17)S1—Ni1—S2—Ni225.50 (2)
C10—N2—Ni1—S2−61.82 (19)S1i—Ni2—S2—C453.82 (9)
C8—N2—Ni1—Ni2161.56 (19)S1—Ni2—S2—C4−126.18 (9)
C6—N2—Ni1—Ni240.3 (2)Ni1—Ni2—S2—C4−100.91 (9)
C10—N2—Ni1—Ni2−82.6 (2)S1i—Ni2—S2—Ni1154.73 (2)
N1—Ni1—Ni2—S2i−2.01 (10)S1—Ni2—S2—Ni1−25.27 (2)
N2—Ni1—Ni2—S2i−149.32 (10)
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