| Literature DB >> 22412416 |
Abstract
In the title complex, [Zn(C(8)H(3)NO(6))(C(4)H(6)N(2))(2)](n), the carboxyl-ate groups of the 3-nitro-phthalate dianion ligand coordinate the Zn(II) ion in a bis-monodentate mode. The Zn(II) ion shows distorted tetra-hedral coordination as it is bonded to two O atoms from the carboxyl-ate groups of symmetry-related 3-nitro-phthalate anions and two N atoms of two independent 1-methyl-imidazole mol-ecules. The bridging 3-nitro-phthalate ligand allows the formation of one-dimensional chains in the c direction. The crystal structure is further stabilized by weak inter-molecular C-H⋯O hydrogen bonds.Entities:
Year: 2012 PMID: 22412416 PMCID: PMC3297226 DOI: 10.1107/S1600536812004576
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C8H3NO6)(C4H6N2)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6551 reflections |
| θ = 1.5–27.9° | |
| µ = 1.38 mm−1 | |
| β = 102.618 (4)° | Needle, colorless |
| 0.18 × 0.06 × 0.06 mm | |
| Rigaku Saturn CCD area-detector diffractometer | 3240 independent reflections |
| Radiation source: rotating anode | 2904 reflections with |
| Confocal monochromator | |
| Detector resolution: 28.57 pixels mm-1 | θmax = 25.0°, θmin = 2.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 13428 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3240 reflections | (Δ/σ)max = 0.009 |
| 255 parameters | Δρmax = 0.43 e Å−3 |
| 0 restraints | Δρmin = −0.37 e Å−3 |
| 0 constraints |
| Zn1 | 0.37841 (3) | 0.207619 (14) | 0.455381 (16) | 0.01901 (10) | |
| O1 | 0.40470 (16) | 0.33302 (8) | 0.29849 (10) | 0.0208 (3) | |
| O2 | 0.21557 (17) | 0.27506 (9) | 0.36867 (10) | 0.0232 (3) | |
| O3 | 0.25521 (18) | 0.36236 (9) | 0.02871 (10) | 0.0240 (3) | |
| O4 | 0.21554 (18) | 0.24772 (9) | 0.11179 (10) | 0.0247 (3) | |
| O5 | 0.1941 (2) | 0.44350 (11) | 0.44209 (11) | 0.0380 (4) | |
| O6 | −0.0626 (2) | 0.41913 (11) | 0.43565 (12) | 0.0429 (4) | |
| N1 | 0.4567 (2) | 0.12574 (10) | 0.36701 (12) | 0.0205 (4) | |
| N2 | 0.4793 (2) | 0.05951 (11) | 0.23352 (12) | 0.0242 (4) | |
| N3 | 0.5739 (2) | 0.25540 (11) | 0.54444 (12) | 0.0230 (4) | |
| N4 | 0.7568 (2) | 0.28401 (11) | 0.67687 (13) | 0.0282 (4) | |
| N5 | 0.0545 (2) | 0.42875 (11) | 0.39749 (13) | 0.0289 (4) | |
| C1 | 0.2635 (2) | 0.32439 (12) | 0.30897 (13) | 0.0178 (4) | |
| C2 | 0.1264 (2) | 0.37573 (12) | 0.24794 (14) | 0.0180 (4) | |
| C3 | 0.0247 (3) | 0.42461 (13) | 0.29116 (15) | 0.0246 (5) | |
| C4 | −0.0997 (3) | 0.47334 (15) | 0.23928 (17) | 0.0353 (6) | |
| H4 | −0.1657 | 0.5046 | 0.2712 | 0.042* | |
| C5 | −0.1245 (3) | 0.47481 (16) | 0.13908 (17) | 0.0392 (6) | |
| H5 | −0.2058 | 0.5085 | 0.1026 | 0.047* | |
| C6 | −0.0277 (3) | 0.42597 (14) | 0.09312 (16) | 0.0320 (5) | |
| H6 | −0.0457 | 0.4265 | 0.0255 | 0.038* | |
| C7 | 0.0960 (2) | 0.37607 (12) | 0.14624 (14) | 0.0205 (4) | |
| C8 | 0.1969 (2) | 0.32282 (13) | 0.09277 (14) | 0.0208 (4) | |
| C9 | 0.4173 (2) | 0.12626 (12) | 0.27040 (15) | 0.0217 (5) | |
| H9 | 0.3547 | 0.1675 | 0.2331 | 0.026* | |
| C10 | 0.5501 (3) | 0.05407 (14) | 0.39165 (16) | 0.0283 (5) | |
| H10 | 0.5967 | 0.0371 | 0.4549 | 0.034* | |
| C11 | 0.5631 (3) | 0.01286 (14) | 0.31019 (16) | 0.0302 (5) | |
| H11 | 0.6178 | −0.0372 | 0.3066 | 0.036* | |
| C12 | 0.4611 (3) | 0.03974 (15) | 0.13012 (16) | 0.0350 (6) | |
| H12A | 0.3992 | 0.0830 | 0.0914 | 0.053* | |
| H12B | 0.4050 | −0.0126 | 0.1161 | 0.053* | |
| H12C | 0.5673 | 0.0358 | 0.1150 | 0.053* | |
| C13 | 0.6139 (3) | 0.24697 (13) | 0.64004 (15) | 0.0244 (5) | |
| H13 | 0.5510 | 0.2190 | 0.6768 | 0.029* | |
| C14 | 0.6993 (3) | 0.30033 (14) | 0.51958 (17) | 0.0305 (5) | |
| H14 | 0.7046 | 0.3160 | 0.4566 | 0.037* | |
| C15 | 0.8124 (3) | 0.31792 (15) | 0.60038 (17) | 0.0344 (6) | |
| H15 | 0.9094 | 0.3473 | 0.6039 | 0.041* | |
| C16 | 0.8332 (3) | 0.29180 (16) | 0.78106 (17) | 0.0407 (6) | |
| H16A | 0.8170 | 0.3474 | 0.8027 | 0.061* | |
| H16B | 0.9483 | 0.2807 | 0.7910 | 0.061* | |
| H16C | 0.7842 | 0.2524 | 0.8176 | 0.061* |
| Zn1 | 0.02000 (15) | 0.01878 (15) | 0.01866 (14) | −0.00048 (9) | 0.00515 (10) | 0.00074 (9) |
| O1 | 0.0161 (8) | 0.0221 (8) | 0.0249 (7) | 0.0007 (6) | 0.0061 (6) | 0.0011 (6) |
| O2 | 0.0216 (8) | 0.0265 (8) | 0.0231 (7) | 0.0019 (6) | 0.0087 (6) | 0.0072 (6) |
| O3 | 0.0287 (8) | 0.0241 (8) | 0.0211 (7) | 0.0016 (6) | 0.0099 (6) | −0.0014 (6) |
| O4 | 0.0267 (9) | 0.0216 (8) | 0.0249 (8) | 0.0037 (6) | 0.0036 (6) | −0.0006 (6) |
| O5 | 0.0327 (10) | 0.0483 (11) | 0.0323 (9) | 0.0025 (8) | 0.0058 (7) | −0.0094 (8) |
| O6 | 0.0411 (11) | 0.0552 (11) | 0.0412 (10) | 0.0013 (9) | 0.0285 (8) | −0.0008 (9) |
| N1 | 0.0228 (10) | 0.0190 (9) | 0.0207 (9) | 0.0013 (7) | 0.0068 (7) | 0.0010 (7) |
| N2 | 0.0248 (10) | 0.0224 (9) | 0.0269 (9) | −0.0005 (8) | 0.0086 (8) | −0.0023 (8) |
| N3 | 0.0197 (9) | 0.0255 (10) | 0.0245 (9) | −0.0002 (7) | 0.0066 (7) | −0.0014 (8) |
| N4 | 0.0187 (10) | 0.0357 (11) | 0.0295 (10) | 0.0015 (8) | 0.0036 (8) | −0.0062 (8) |
| N5 | 0.0340 (12) | 0.0273 (10) | 0.0289 (10) | 0.0058 (8) | 0.0146 (9) | −0.0006 (8) |
| C1 | 0.0217 (11) | 0.0157 (10) | 0.0163 (10) | −0.0006 (8) | 0.0047 (8) | −0.0030 (8) |
| C2 | 0.0163 (10) | 0.0169 (10) | 0.0220 (10) | −0.0001 (8) | 0.0066 (8) | 0.0023 (8) |
| C3 | 0.0248 (12) | 0.0261 (12) | 0.0251 (11) | 0.0029 (9) | 0.0106 (9) | 0.0013 (9) |
| C4 | 0.0301 (14) | 0.0393 (14) | 0.0395 (14) | 0.0162 (11) | 0.0142 (11) | 0.0017 (11) |
| C5 | 0.0300 (14) | 0.0484 (16) | 0.0380 (14) | 0.0215 (11) | 0.0047 (11) | 0.0079 (12) |
| C6 | 0.0279 (13) | 0.0407 (14) | 0.0257 (12) | 0.0086 (10) | 0.0027 (9) | 0.0041 (10) |
| C7 | 0.0166 (11) | 0.0221 (11) | 0.0232 (10) | 0.0011 (8) | 0.0052 (8) | 0.0009 (9) |
| C8 | 0.0165 (11) | 0.0261 (12) | 0.0175 (10) | 0.0002 (9) | −0.0013 (8) | −0.0027 (9) |
| C9 | 0.0187 (11) | 0.0176 (11) | 0.0292 (11) | −0.0002 (8) | 0.0058 (8) | 0.0011 (9) |
| C10 | 0.0273 (13) | 0.0291 (12) | 0.0285 (11) | 0.0057 (10) | 0.0059 (9) | 0.0088 (10) |
| C11 | 0.0305 (13) | 0.0240 (12) | 0.0375 (13) | 0.0091 (10) | 0.0104 (10) | 0.0043 (10) |
| C12 | 0.0433 (15) | 0.0348 (13) | 0.0287 (12) | −0.0035 (11) | 0.0115 (11) | −0.0080 (11) |
| C13 | 0.0206 (11) | 0.0263 (12) | 0.0269 (11) | 0.0016 (9) | 0.0066 (9) | −0.0010 (9) |
| C14 | 0.0286 (13) | 0.0348 (13) | 0.0313 (13) | −0.0064 (10) | 0.0134 (10) | −0.0026 (10) |
| C15 | 0.0237 (13) | 0.0396 (14) | 0.0425 (14) | −0.0095 (10) | 0.0129 (10) | −0.0082 (12) |
| C16 | 0.0277 (14) | 0.0570 (17) | 0.0324 (14) | 0.0029 (11) | −0.0047 (10) | −0.0035 (12) |
| Zn1—O2 | 1.9454 (14) | C2—C7 | 1.396 (3) |
| Zn1—O3i | 1.9612 (14) | C3—C4 | 1.376 (3) |
| Zn1—N3 | 1.9841 (17) | C4—C5 | 1.378 (3) |
| Zn1—N1 | 2.0116 (17) | C4—H4 | 0.9300 |
| O1—C1 | 1.231 (2) | C5—C6 | 1.383 (3) |
| O2—C1 | 1.279 (2) | C5—H5 | 0.9300 |
| O3—C8 | 1.281 (2) | C6—C7 | 1.389 (3) |
| O4—C8 | 1.234 (2) | C6—H6 | 0.9300 |
| O5—N5 | 1.223 (2) | C7—C8 | 1.511 (3) |
| O6—N5 | 1.226 (2) | C9—H9 | 0.9300 |
| N1—C9 | 1.326 (3) | C10—C11 | 1.346 (3) |
| N1—C10 | 1.389 (3) | C10—H10 | 0.9300 |
| N2—C9 | 1.341 (3) | C11—H11 | 0.9300 |
| N2—C11 | 1.371 (3) | C12—H12A | 0.9600 |
| N2—C12 | 1.463 (3) | C12—H12B | 0.9600 |
| N3—C13 | 1.319 (3) | C12—H12C | 0.9600 |
| N3—C14 | 1.380 (3) | C13—H13 | 0.9300 |
| N4—C13 | 1.335 (3) | C14—C15 | 1.340 (3) |
| N4—C15 | 1.373 (3) | C14—H14 | 0.9300 |
| N4—C16 | 1.470 (3) | C15—H15 | 0.9300 |
| N5—C3 | 1.462 (3) | C16—H16A | 0.9600 |
| C1—C2 | 1.516 (3) | C16—H16B | 0.9600 |
| C2—C3 | 1.390 (3) | C16—H16C | 0.9600 |
| O2—Zn1—O3i | 105.60 (6) | C5—C6—H6 | 119.4 |
| O2—Zn1—N3 | 123.39 (7) | C7—C6—H6 | 119.4 |
| O3i—Zn1—N3 | 110.17 (7) | C6—C7—C2 | 120.04 (19) |
| O2—Zn1—N1 | 104.66 (6) | C6—C7—C8 | 119.29 (18) |
| O3i—Zn1—N1 | 103.44 (7) | C2—C7—C8 | 120.67 (17) |
| N3—Zn1—N1 | 107.78 (7) | O4—C8—O3 | 125.73 (19) |
| C1—O2—Zn1 | 118.44 (13) | O4—C8—C7 | 119.97 (18) |
| C8—O3—Zn1ii | 114.34 (13) | O3—C8—C7 | 114.30 (17) |
| C9—N1—C10 | 105.16 (17) | N1—C9—N2 | 111.11 (18) |
| C9—N1—Zn1 | 125.92 (14) | N1—C9—H9 | 124.4 |
| C10—N1—Zn1 | 128.74 (14) | N2—C9—H9 | 124.4 |
| C9—N2—C11 | 107.74 (17) | C11—C10—N1 | 109.76 (19) |
| C9—N2—C12 | 126.27 (18) | C11—C10—H10 | 125.1 |
| C11—N2—C12 | 125.99 (19) | N1—C10—H10 | 125.1 |
| C13—N3—C14 | 105.86 (18) | C10—C11—N2 | 106.23 (19) |
| C13—N3—Zn1 | 126.48 (15) | C10—C11—H11 | 126.9 |
| C14—N3—Zn1 | 127.59 (15) | N2—C11—H11 | 126.9 |
| C13—N4—C15 | 107.49 (19) | N2—C12—H12A | 109.5 |
| C13—N4—C16 | 125.6 (2) | N2—C12—H12B | 109.5 |
| C15—N4—C16 | 126.8 (2) | H12A—C12—H12B | 109.5 |
| O5—N5—O6 | 124.51 (19) | N2—C12—H12C | 109.5 |
| O5—N5—C3 | 117.59 (18) | H12A—C12—H12C | 109.5 |
| O6—N5—C3 | 117.88 (19) | H12B—C12—H12C | 109.5 |
| O1—C1—O2 | 126.52 (18) | N3—C13—N4 | 110.9 (2) |
| O1—C1—C2 | 119.99 (17) | N3—C13—H13 | 124.6 |
| O2—C1—C2 | 113.49 (17) | N4—C13—H13 | 124.6 |
| C3—C2—C7 | 116.93 (18) | C15—C14—N3 | 109.3 (2) |
| C3—C2—C1 | 121.21 (17) | C15—C14—H14 | 125.3 |
| C7—C2—C1 | 121.86 (17) | N3—C14—H14 | 125.3 |
| C4—C3—C2 | 123.5 (2) | C14—C15—N4 | 106.4 (2) |
| C4—C3—N5 | 117.16 (19) | C14—C15—H15 | 126.8 |
| C2—C3—N5 | 119.23 (18) | N4—C15—H15 | 126.8 |
| C3—C4—C5 | 118.6 (2) | N4—C16—H16A | 109.5 |
| C3—C4—H4 | 120.7 | N4—C16—H16B | 109.5 |
| C5—C4—H4 | 120.7 | H16A—C16—H16B | 109.5 |
| C4—C5—C6 | 119.7 (2) | N4—C16—H16C | 109.5 |
| C4—C5—H5 | 120.2 | H16A—C16—H16C | 109.5 |
| C6—C5—H5 | 120.2 | H16B—C16—H16C | 109.5 |
| C5—C6—C7 | 121.2 (2) | ||
| O3i—Zn1—O2—C1 | −177.09 (13) | C4—C5—C6—C7 | −0.9 (4) |
| N3—Zn1—O2—C1 | 55.12 (16) | C5—C6—C7—C2 | −1.2 (3) |
| N1—Zn1—O2—C1 | −68.28 (15) | C5—C6—C7—C8 | 179.1 (2) |
| O2—Zn1—N1—C9 | 7.11 (18) | C3—C2—C7—C6 | 2.2 (3) |
| O3i—Zn1—N1—C9 | 117.49 (17) | C1—C2—C7—C6 | −178.04 (19) |
| N3—Zn1—N1—C9 | −125.83 (17) | C3—C2—C7—C8 | −178.14 (18) |
| O2—Zn1—N1—C10 | −167.15 (17) | C1—C2—C7—C8 | 1.7 (3) |
| O3i—Zn1—N1—C10 | −56.76 (19) | Zn1ii—O3—C8—O4 | 1.6 (3) |
| N3—Zn1—N1—C10 | 59.91 (19) | Zn1ii—O3—C8—C7 | −177.52 (12) |
| O2—Zn1—N3—C13 | 121.96 (17) | C6—C7—C8—O4 | −129.1 (2) |
| O3i—Zn1—N3—C13 | −3.9 (2) | C2—C7—C8—O4 | 51.2 (3) |
| N1—Zn1—N3—C13 | −116.05 (18) | C6—C7—C8—O3 | 50.1 (3) |
| O2—Zn1—N3—C14 | −61.5 (2) | C2—C7—C8—O3 | −129.6 (2) |
| O3i—Zn1—N3—C14 | 172.64 (17) | C10—N1—C9—N2 | 0.3 (2) |
| N1—Zn1—N3—C14 | 60.4 (2) | Zn1—N1—C9—N2 | −175.08 (13) |
| Zn1—O2—C1—O1 | 1.6 (3) | C11—N2—C9—N1 | 0.3 (2) |
| Zn1—O2—C1—C2 | −177.94 (12) | C12—N2—C9—N1 | −179.79 (19) |
| O1—C1—C2—C3 | −125.2 (2) | C9—N1—C10—C11 | −0.7 (2) |
| O2—C1—C2—C3 | 54.5 (2) | Zn1—N1—C10—C11 | 174.44 (15) |
| O1—C1—C2—C7 | 55.0 (3) | N1—C10—C11—N2 | 0.9 (3) |
| O2—C1—C2—C7 | −125.3 (2) | C9—N2—C11—C10 | −0.7 (2) |
| C7—C2—C3—C4 | −1.3 (3) | C12—N2—C11—C10 | 179.3 (2) |
| C1—C2—C3—C4 | 178.9 (2) | C14—N3—C13—N4 | 0.1 (2) |
| C7—C2—C3—N5 | −178.00 (18) | Zn1—N3—C13—N4 | 177.23 (14) |
| C1—C2—C3—N5 | 2.2 (3) | C15—N4—C13—N3 | −0.3 (2) |
| O5—N5—C3—C4 | −127.4 (2) | C16—N4—C13—N3 | 175.7 (2) |
| O6—N5—C3—C4 | 50.9 (3) | C13—N3—C14—C15 | 0.1 (3) |
| O5—N5—C3—C2 | 49.5 (3) | Zn1—N3—C14—C15 | −176.93 (16) |
| O6—N5—C3—C2 | −132.1 (2) | N3—C14—C15—N4 | −0.3 (3) |
| C2—C3—C4—C5 | −0.7 (4) | C13—N4—C15—C14 | 0.4 (3) |
| N5—C3—C4—C5 | 176.1 (2) | C16—N4—C15—C14 | −175.5 (2) |
| C3—C4—C5—C6 | 1.8 (4) |
| H··· | ||||
| C9—H9···O4 | 0.93 | 2.25 | 3.156 (3) | 166 |
| C11—H11···O1iii | 0.93 | 2.53 | 3.297 (3) | 140 |
| C12—H12 | 0.96 | 2.44 | 3.078 (3) | 124 |
| C13—H13···O1i | 0.93 | 2.46 | 3.373 (3) | 169 |
| C16—H16 | 0.96 | 2.44 | 3.345 (3) | 158 |
Selected bond angles (°)
| O2—Zn1—O3i | 105.60 (6) |
| O2—Zn1—N3 | 123.39 (7) |
| O3i—Zn1—N3 | 110.17 (7) |
| O2—Zn1—N1 | 104.66 (6) |
| O3i—Zn1—N1 | 103.44 (7) |
| N3—Zn1—N1 | 107.78 (7) |
| O1—C1—O2 | 126.52 (18) |
| O4—C8—O3 | 125.73 (19) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9⋯O4 | 0.93 | 2.25 | 3.156 (3) | 166 |
| C11—H11⋯O1ii | 0.93 | 2.53 | 3.297 (3) | 140 |
| C12—H12 | 0.96 | 2.44 | 3.078 (3) | 124 |
| C13—H13⋯O1i | 0.93 | 2.46 | 3.373 (3) | 169 |
| C16—H16 | 0.96 | 2.44 | 3.345 (3) | 158 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .