Literature DB >> 22412416

catena-Poly[[bis-(1-methyl-1H-imidazole-κN)zinc]-μ-3-nitro-phthalato-κO:O].

Xi-Juan Zhang, Ming-Lin Guo.   

Abstract

In the title complex, [Zn(C(8)H(3)NO(6))(C(4)H(6)N(2))(2)](n), the carboxyl-ate groups of the 3-nitro-phthalate dianion ligand coordinate the Zn(II) ion in a bis-monodentate mode. The Zn(II) ion shows distorted tetra-hedral coordination as it is bonded to two O atoms from the carboxyl-ate groups of symmetry-related 3-nitro-phthalate anions and two N atoms of two independent 1-methyl-imidazole mol-ecules. The bridging 3-nitro-phthalate ligand allows the formation of one-dimensional chains in the c direction. The crystal structure is further stabilized by weak inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22412416      PMCID: PMC3297226          DOI: 10.1107/S1600536812004576

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures with methyl­imidazole, see: Baca et al. (2003 ▶, 2004 ▶); Zhao (2008 ▶). For related coordination modes of phthalate and substituted phthalate with metal, see: Biagini Cingi et al. (1978 ▶); Guo & Guo (2007 ▶); Ma et al. (2004 ▶); Wang et al. (2009 ▶); Yang et al. (2003 ▶).

Experimental

Crystal data

[Zn(C8H3NO6)(C4H6N2)2] M = 438.70 Monoclinic, a = 8.375 (2) Å b = 16.005 (4) Å c = 14.057 (4) Å β = 102.618 (4)° V = 1838.7 (8) Å3 Z = 4 Mo Kα radiation μ = 1.38 mm−1 T = 294 K 0.18 × 0.06 × 0.06 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.883, T max = 0.921 13428 measured reflections 3240 independent reflections 2904 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.074 S = 1.06 3240 reflections 255 parameters H-atom parameters constrained Δρmax = 0.43 e Å−3 Δρmin = −0.37 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812004576/bh2410sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812004576/bh2410Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C8H3NO6)(C4H6N2)2]F(000) = 896
Mr = 438.70Dx = 1.585 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6551 reflections
a = 8.375 (2) Åθ = 1.5–27.9°
b = 16.005 (4) ŵ = 1.38 mm1
c = 14.057 (4) ÅT = 294 K
β = 102.618 (4)°Needle, colorless
V = 1838.7 (8) Å30.18 × 0.06 × 0.06 mm
Z = 4
Rigaku Saturn CCD area-detector diffractometer3240 independent reflections
Radiation source: rotating anode2904 reflections with I > 2σ(I)
Confocal monochromatorRint = 0.027
Detector resolution: 28.57 pixels mm-1θmax = 25.0°, θmin = 2.0°
ω scansh = −9→9
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −19→18
Tmin = 0.883, Tmax = 0.921l = −16→16
13428 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.074H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0448P)2 + 0.3182P] where P = (Fo2 + 2Fc2)/3
3240 reflections(Δ/σ)max = 0.009
255 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = −0.37 e Å3
0 constraints
xyzUiso*/Ueq
Zn10.37841 (3)0.207619 (14)0.455381 (16)0.01901 (10)
O10.40470 (16)0.33302 (8)0.29849 (10)0.0208 (3)
O20.21557 (17)0.27506 (9)0.36867 (10)0.0232 (3)
O30.25521 (18)0.36236 (9)0.02871 (10)0.0240 (3)
O40.21554 (18)0.24772 (9)0.11179 (10)0.0247 (3)
O50.1941 (2)0.44350 (11)0.44209 (11)0.0380 (4)
O6−0.0626 (2)0.41913 (11)0.43565 (12)0.0429 (4)
N10.4567 (2)0.12574 (10)0.36701 (12)0.0205 (4)
N20.4793 (2)0.05951 (11)0.23352 (12)0.0242 (4)
N30.5739 (2)0.25540 (11)0.54444 (12)0.0230 (4)
N40.7568 (2)0.28401 (11)0.67687 (13)0.0282 (4)
N50.0545 (2)0.42875 (11)0.39749 (13)0.0289 (4)
C10.2635 (2)0.32439 (12)0.30897 (13)0.0178 (4)
C20.1264 (2)0.37573 (12)0.24794 (14)0.0180 (4)
C30.0247 (3)0.42461 (13)0.29116 (15)0.0246 (5)
C4−0.0997 (3)0.47334 (15)0.23928 (17)0.0353 (6)
H4−0.16570.50460.27120.042*
C5−0.1245 (3)0.47481 (16)0.13908 (17)0.0392 (6)
H5−0.20580.50850.10260.047*
C6−0.0277 (3)0.42597 (14)0.09312 (16)0.0320 (5)
H6−0.04570.42650.02550.038*
C70.0960 (2)0.37607 (12)0.14624 (14)0.0205 (4)
C80.1969 (2)0.32282 (13)0.09277 (14)0.0208 (4)
C90.4173 (2)0.12626 (12)0.27040 (15)0.0217 (5)
H90.35470.16750.23310.026*
C100.5501 (3)0.05407 (14)0.39165 (16)0.0283 (5)
H100.59670.03710.45490.034*
C110.5631 (3)0.01286 (14)0.31019 (16)0.0302 (5)
H110.6178−0.03720.30660.036*
C120.4611 (3)0.03974 (15)0.13012 (16)0.0350 (6)
H12A0.39920.08300.09140.053*
H12B0.4050−0.01260.11610.053*
H12C0.56730.03580.11500.053*
C130.6139 (3)0.24697 (13)0.64004 (15)0.0244 (5)
H130.55100.21900.67680.029*
C140.6993 (3)0.30033 (14)0.51958 (17)0.0305 (5)
H140.70460.31600.45660.037*
C150.8124 (3)0.31792 (15)0.60038 (17)0.0344 (6)
H150.90940.34730.60390.041*
C160.8332 (3)0.29180 (16)0.78106 (17)0.0407 (6)
H16A0.81700.34740.80270.061*
H16B0.94830.28070.79100.061*
H16C0.78420.25240.81760.061*
U11U22U33U12U13U23
Zn10.02000 (15)0.01878 (15)0.01866 (14)−0.00048 (9)0.00515 (10)0.00074 (9)
O10.0161 (8)0.0221 (8)0.0249 (7)0.0007 (6)0.0061 (6)0.0011 (6)
O20.0216 (8)0.0265 (8)0.0231 (7)0.0019 (6)0.0087 (6)0.0072 (6)
O30.0287 (8)0.0241 (8)0.0211 (7)0.0016 (6)0.0099 (6)−0.0014 (6)
O40.0267 (9)0.0216 (8)0.0249 (8)0.0037 (6)0.0036 (6)−0.0006 (6)
O50.0327 (10)0.0483 (11)0.0323 (9)0.0025 (8)0.0058 (7)−0.0094 (8)
O60.0411 (11)0.0552 (11)0.0412 (10)0.0013 (9)0.0285 (8)−0.0008 (9)
N10.0228 (10)0.0190 (9)0.0207 (9)0.0013 (7)0.0068 (7)0.0010 (7)
N20.0248 (10)0.0224 (9)0.0269 (9)−0.0005 (8)0.0086 (8)−0.0023 (8)
N30.0197 (9)0.0255 (10)0.0245 (9)−0.0002 (7)0.0066 (7)−0.0014 (8)
N40.0187 (10)0.0357 (11)0.0295 (10)0.0015 (8)0.0036 (8)−0.0062 (8)
N50.0340 (12)0.0273 (10)0.0289 (10)0.0058 (8)0.0146 (9)−0.0006 (8)
C10.0217 (11)0.0157 (10)0.0163 (10)−0.0006 (8)0.0047 (8)−0.0030 (8)
C20.0163 (10)0.0169 (10)0.0220 (10)−0.0001 (8)0.0066 (8)0.0023 (8)
C30.0248 (12)0.0261 (12)0.0251 (11)0.0029 (9)0.0106 (9)0.0013 (9)
C40.0301 (14)0.0393 (14)0.0395 (14)0.0162 (11)0.0142 (11)0.0017 (11)
C50.0300 (14)0.0484 (16)0.0380 (14)0.0215 (11)0.0047 (11)0.0079 (12)
C60.0279 (13)0.0407 (14)0.0257 (12)0.0086 (10)0.0027 (9)0.0041 (10)
C70.0166 (11)0.0221 (11)0.0232 (10)0.0011 (8)0.0052 (8)0.0009 (9)
C80.0165 (11)0.0261 (12)0.0175 (10)0.0002 (9)−0.0013 (8)−0.0027 (9)
C90.0187 (11)0.0176 (11)0.0292 (11)−0.0002 (8)0.0058 (8)0.0011 (9)
C100.0273 (13)0.0291 (12)0.0285 (11)0.0057 (10)0.0059 (9)0.0088 (10)
C110.0305 (13)0.0240 (12)0.0375 (13)0.0091 (10)0.0104 (10)0.0043 (10)
C120.0433 (15)0.0348 (13)0.0287 (12)−0.0035 (11)0.0115 (11)−0.0080 (11)
C130.0206 (11)0.0263 (12)0.0269 (11)0.0016 (9)0.0066 (9)−0.0010 (9)
C140.0286 (13)0.0348 (13)0.0313 (13)−0.0064 (10)0.0134 (10)−0.0026 (10)
C150.0237 (13)0.0396 (14)0.0425 (14)−0.0095 (10)0.0129 (10)−0.0082 (12)
C160.0277 (14)0.0570 (17)0.0324 (14)0.0029 (11)−0.0047 (10)−0.0035 (12)
Zn1—O21.9454 (14)C2—C71.396 (3)
Zn1—O3i1.9612 (14)C3—C41.376 (3)
Zn1—N31.9841 (17)C4—C51.378 (3)
Zn1—N12.0116 (17)C4—H40.9300
O1—C11.231 (2)C5—C61.383 (3)
O2—C11.279 (2)C5—H50.9300
O3—C81.281 (2)C6—C71.389 (3)
O4—C81.234 (2)C6—H60.9300
O5—N51.223 (2)C7—C81.511 (3)
O6—N51.226 (2)C9—H90.9300
N1—C91.326 (3)C10—C111.346 (3)
N1—C101.389 (3)C10—H100.9300
N2—C91.341 (3)C11—H110.9300
N2—C111.371 (3)C12—H12A0.9600
N2—C121.463 (3)C12—H12B0.9600
N3—C131.319 (3)C12—H12C0.9600
N3—C141.380 (3)C13—H130.9300
N4—C131.335 (3)C14—C151.340 (3)
N4—C151.373 (3)C14—H140.9300
N4—C161.470 (3)C15—H150.9300
N5—C31.462 (3)C16—H16A0.9600
C1—C21.516 (3)C16—H16B0.9600
C2—C31.390 (3)C16—H16C0.9600
O2—Zn1—O3i105.60 (6)C5—C6—H6119.4
O2—Zn1—N3123.39 (7)C7—C6—H6119.4
O3i—Zn1—N3110.17 (7)C6—C7—C2120.04 (19)
O2—Zn1—N1104.66 (6)C6—C7—C8119.29 (18)
O3i—Zn1—N1103.44 (7)C2—C7—C8120.67 (17)
N3—Zn1—N1107.78 (7)O4—C8—O3125.73 (19)
C1—O2—Zn1118.44 (13)O4—C8—C7119.97 (18)
C8—O3—Zn1ii114.34 (13)O3—C8—C7114.30 (17)
C9—N1—C10105.16 (17)N1—C9—N2111.11 (18)
C9—N1—Zn1125.92 (14)N1—C9—H9124.4
C10—N1—Zn1128.74 (14)N2—C9—H9124.4
C9—N2—C11107.74 (17)C11—C10—N1109.76 (19)
C9—N2—C12126.27 (18)C11—C10—H10125.1
C11—N2—C12125.99 (19)N1—C10—H10125.1
C13—N3—C14105.86 (18)C10—C11—N2106.23 (19)
C13—N3—Zn1126.48 (15)C10—C11—H11126.9
C14—N3—Zn1127.59 (15)N2—C11—H11126.9
C13—N4—C15107.49 (19)N2—C12—H12A109.5
C13—N4—C16125.6 (2)N2—C12—H12B109.5
C15—N4—C16126.8 (2)H12A—C12—H12B109.5
O5—N5—O6124.51 (19)N2—C12—H12C109.5
O5—N5—C3117.59 (18)H12A—C12—H12C109.5
O6—N5—C3117.88 (19)H12B—C12—H12C109.5
O1—C1—O2126.52 (18)N3—C13—N4110.9 (2)
O1—C1—C2119.99 (17)N3—C13—H13124.6
O2—C1—C2113.49 (17)N4—C13—H13124.6
C3—C2—C7116.93 (18)C15—C14—N3109.3 (2)
C3—C2—C1121.21 (17)C15—C14—H14125.3
C7—C2—C1121.86 (17)N3—C14—H14125.3
C4—C3—C2123.5 (2)C14—C15—N4106.4 (2)
C4—C3—N5117.16 (19)C14—C15—H15126.8
C2—C3—N5119.23 (18)N4—C15—H15126.8
C3—C4—C5118.6 (2)N4—C16—H16A109.5
C3—C4—H4120.7N4—C16—H16B109.5
C5—C4—H4120.7H16A—C16—H16B109.5
C4—C5—C6119.7 (2)N4—C16—H16C109.5
C4—C5—H5120.2H16A—C16—H16C109.5
C6—C5—H5120.2H16B—C16—H16C109.5
C5—C6—C7121.2 (2)
O3i—Zn1—O2—C1−177.09 (13)C4—C5—C6—C7−0.9 (4)
N3—Zn1—O2—C155.12 (16)C5—C6—C7—C2−1.2 (3)
N1—Zn1—O2—C1−68.28 (15)C5—C6—C7—C8179.1 (2)
O2—Zn1—N1—C97.11 (18)C3—C2—C7—C62.2 (3)
O3i—Zn1—N1—C9117.49 (17)C1—C2—C7—C6−178.04 (19)
N3—Zn1—N1—C9−125.83 (17)C3—C2—C7—C8−178.14 (18)
O2—Zn1—N1—C10−167.15 (17)C1—C2—C7—C81.7 (3)
O3i—Zn1—N1—C10−56.76 (19)Zn1ii—O3—C8—O41.6 (3)
N3—Zn1—N1—C1059.91 (19)Zn1ii—O3—C8—C7−177.52 (12)
O2—Zn1—N3—C13121.96 (17)C6—C7—C8—O4−129.1 (2)
O3i—Zn1—N3—C13−3.9 (2)C2—C7—C8—O451.2 (3)
N1—Zn1—N3—C13−116.05 (18)C6—C7—C8—O350.1 (3)
O2—Zn1—N3—C14−61.5 (2)C2—C7—C8—O3−129.6 (2)
O3i—Zn1—N3—C14172.64 (17)C10—N1—C9—N20.3 (2)
N1—Zn1—N3—C1460.4 (2)Zn1—N1—C9—N2−175.08 (13)
Zn1—O2—C1—O11.6 (3)C11—N2—C9—N10.3 (2)
Zn1—O2—C1—C2−177.94 (12)C12—N2—C9—N1−179.79 (19)
O1—C1—C2—C3−125.2 (2)C9—N1—C10—C11−0.7 (2)
O2—C1—C2—C354.5 (2)Zn1—N1—C10—C11174.44 (15)
O1—C1—C2—C755.0 (3)N1—C10—C11—N20.9 (3)
O2—C1—C2—C7−125.3 (2)C9—N2—C11—C10−0.7 (2)
C7—C2—C3—C4−1.3 (3)C12—N2—C11—C10179.3 (2)
C1—C2—C3—C4178.9 (2)C14—N3—C13—N40.1 (2)
C7—C2—C3—N5−178.00 (18)Zn1—N3—C13—N4177.23 (14)
C1—C2—C3—N52.2 (3)C15—N4—C13—N3−0.3 (2)
O5—N5—C3—C4−127.4 (2)C16—N4—C13—N3175.7 (2)
O6—N5—C3—C450.9 (3)C13—N3—C14—C150.1 (3)
O5—N5—C3—C249.5 (3)Zn1—N3—C14—C15−176.93 (16)
O6—N5—C3—C2−132.1 (2)N3—C14—C15—N4−0.3 (3)
C2—C3—C4—C5−0.7 (4)C13—N4—C15—C140.4 (3)
N5—C3—C4—C5176.1 (2)C16—N4—C15—C14−175.5 (2)
C3—C4—C5—C61.8 (4)
D—H···AD—HH···AD···AD—H···A
C9—H9···O40.932.253.156 (3)166
C11—H11···O1iii0.932.533.297 (3)140
C12—H12A···O5ii0.962.443.078 (3)124
C13—H13···O1i0.932.463.373 (3)169
C16—H16B···O2iv0.962.443.345 (3)158
Table 1

Selected bond angles (°)

O2—Zn1—O3i105.60 (6)
O2—Zn1—N3123.39 (7)
O3i—Zn1—N3110.17 (7)
O2—Zn1—N1104.66 (6)
O3i—Zn1—N1103.44 (7)
N3—Zn1—N1107.78 (7)
O1—C1—O2126.52 (18)
O4—C8—O3125.73 (19)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9⋯O40.932.253.156 (3)166
C11—H11⋯O1ii0.932.533.297 (3)140
C12—H12A⋯O5iii0.962.443.078 (3)124
C13—H13⋯O1i0.932.463.373 (3)169
C16—H16B⋯O2iv0.962.443.345 (3)158

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  4 in total

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  catena-Poly[[bis-(1-methyl-imidazole-κN)zinc(II)]-μ-isophthalato-κO:O].

Authors:  Juan Zhao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-27

3.  Poly[[di-mu-aqua-tetraaquadi-mu-hydroxido-bis(mu3-3-nitrophthalato)tricopper(II)] dihydrate].

Authors:  Feng-Qin Wang; Fan-Li Lu; Bin Wei; Yong-Nan Zhao
Journal:  Acta Crystallogr C       Date:  2008-12-23       Impact factor: 1.172

4.  Poly[[triaquazinc(II)]-mu(3)-4-nitrophthalato-kappa3O1:O2:O2'].

Authors:  Ming-Lin Guo; Chen-Hu Guo
Journal:  Acta Crystallogr C       Date:  2007-11-24       Impact factor: 1.172

  4 in total

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