Literature DB >> 22412405

(Dimethyl sulfoxide-κO)[2-({(ethyl-sulfan-yl)[2-(2-oxidobenzyl-idene-κO)hydrazin-yl-idene-κN]meth-yl}-imino-meth-yl)-phenol-ato-κO]dioxidouranium(VI).

Reza Takjoo, Seik Weng Ng, Edward R T Tiekink.   

Abstract

The U(VI) atom in the title complex, [U(C(17)H(15)N(3)O(2)S)O(2)(C(2)H(6)OS)], exists within a distorted penta-gonal-pyramidal geometry where the oxide atoms occupy axial positions [O-U-O = 177.84 (14)°] and the penta-gonal plane is defined by the N(2)O(2) atoms of the tetra-dentate Schiff base ligand and the O atom of the dimethyl sulfoxide mol-ecule. In the crystal, centrosymmetric aggregates are formed via pairs of C-H⋯O inter-actions. The azomethine C=N atoms and ethyl-thiolyl group are disordered over two orientations in a 0.828 (3):0.172 (3) ratio.

Entities:  

Year:  2012        PMID: 22412405      PMCID: PMC3297215          DOI: 10.1107/S1600536812003789

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to uranyl Schiff base complexes, see: Şahin et al. (2010 ▶); Özdemir et al. (2011 ▶).

Experimental

Crystal data

[U(C17H15N3O2S)O2(C2H6OS)] M = 673.54 Monoclinic, a = 11.6988 (3) Å b = 15.4972 (3) Å c = 12.2246 (3) Å β = 105.714 (3)° V = 2133.47 (9) Å3 Z = 4 Mo Kα radiation μ = 7.84 mm−1 T = 100 K 0.18 × 0.12 × 0.10 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010 ▶) T min = 0.333, T max = 0.508 19265 measured reflections 4927 independent reflections 4237 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.063 S = 1.01 4927 reflections 281 parameters 3 restraints H-atom parameters constrained Δρmax = 0.98 e Å−3 Δρmin = −1.52 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812003789/hb6614sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812003789/hb6614Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[U(C17H15N3O2S)O2(C2H6OS)]F(000) = 1280
Mr = 673.54Dx = 2.097 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 8576 reflections
a = 11.6988 (3) Åθ = 2.2–27.5°
b = 15.4972 (3) ŵ = 7.84 mm1
c = 12.2246 (3) ÅT = 100 K
β = 105.714 (3)°Prism, red
V = 2133.47 (9) Å30.18 × 0.12 × 0.10 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector4927 independent reflections
Radiation source: SuperNova (Mo) X-ray Source4237 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.044
Detector resolution: 10.4041 pixels mm-1θmax = 27.6°, θmin = 2.5°
ω scanh = −14→15
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010)k = −20→20
Tmin = 0.333, Tmax = 0.508l = −15→11
19265 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.063H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0243P)2 + 4.2587P] where P = (Fo2 + 2Fc2)/3
4927 reflections(Δ/σ)max = 0.001
281 parametersΔρmax = 0.98 e Å3
3 restraintsΔρmin = −1.52 e Å3
xyzUiso*/UeqOcc. (<1)
U0.364161 (13)0.640410 (10)0.689855 (13)0.01292 (6)
S10.15547 (15)0.46851 (11)0.34195 (14)0.0341 (5)0.828 (3)
S1'0.0795 (7)0.3967 (5)0.5070 (7)0.034*0.172 (3)
S20.58169 (11)0.77489 (8)0.88184 (11)0.0260 (3)
O10.4057 (3)0.72624 (19)0.5554 (3)0.0171 (7)
O20.3653 (3)0.5871 (2)0.8599 (3)0.0257 (8)
O30.2236 (3)0.69271 (19)0.6677 (3)0.0169 (7)
O40.5046 (2)0.58833 (18)0.7065 (3)0.0168 (7)
O50.4562 (3)0.7596 (2)0.8050 (3)0.0220 (7)
N10.3115 (3)0.5629 (2)0.4990 (3)0.0145 (8)
N20.1805 (3)0.4702 (2)0.5585 (3)0.0211 (9)0.828 (3)
C8'0.1805 (3)0.4702 (2)0.5585 (3)0.0211 (9)0.172
N30.2299 (3)0.5040 (2)0.6674 (3)0.0150 (8)
C10.4713 (4)0.7110 (3)0.4855 (4)0.0140 (9)
C20.5515 (4)0.7744 (3)0.4682 (4)0.0194 (10)
H20.56030.82700.50960.023*
C30.6170 (4)0.7605 (3)0.3915 (4)0.0204 (10)
H30.67080.80360.38120.025*
C40.6058 (4)0.6841 (3)0.3285 (4)0.0195 (10)
H40.65170.67560.27610.023*
C50.5290 (4)0.6222 (3)0.3427 (4)0.0194 (10)
H50.52020.57090.29860.023*
C60.4613 (4)0.6331 (3)0.4226 (4)0.0157 (9)
C70.3764 (4)0.5671 (3)0.4269 (4)0.0148 (9)
H70.36620.52220.37210.018*
N2'0.2226 (4)0.4984 (3)0.4777 (4)0.0225 (10)0.172 (3)
C80.2226 (4)0.4984 (3)0.4777 (4)0.0225 (10)0.828 (3)
C90.0485 (5)0.3874 (4)0.3578 (6)0.0248 (15)0.828 (3)
H9A0.00550.40930.41160.030*0.828 (3)
H9B−0.01050.37900.28340.030*0.828 (3)
C9'0.097 (3)0.3909 (19)0.3636 (16)0.025*0.172 (3)
H9'A0.01640.39800.31130.030*0.172 (3)
H9'B0.14270.44260.35380.030*0.172 (3)
C100.1023 (6)0.3020 (5)0.3993 (6)0.0410 (18)0.828 (3)
H10A0.03950.26180.40510.061*0.828 (3)
H10B0.15880.30910.47420.061*0.828 (3)
H10C0.14370.27910.34580.061*0.828 (3)
C10'0.152 (3)0.3162 (19)0.320 (3)0.041*0.172 (3)
H10D0.15170.32700.24100.061*0.172 (3)
H10E0.10650.26370.32400.061*0.172 (3)
H10F0.23390.30880.36650.061*0.172 (3)
C110.1832 (4)0.4694 (3)0.7413 (4)0.0167 (9)
H110.12650.42510.71420.020*
C120.2075 (4)0.4904 (3)0.8601 (4)0.0183 (10)
C130.1371 (4)0.4507 (3)0.9225 (4)0.0241 (11)
H130.07700.41110.88560.029*
C140.1538 (4)0.4683 (4)1.0362 (4)0.0290 (12)
H140.10430.44241.07700.035*
C150.2443 (5)0.5245 (3)1.0904 (4)0.0274 (11)
H150.25670.53631.16900.033*
C160.3160 (4)0.5633 (3)1.0326 (4)0.0247 (11)
H160.37810.60041.07200.030*
C170.2984 (4)0.5486 (3)0.9154 (4)0.0185 (10)
C180.6216 (5)0.6806 (3)0.9658 (4)0.0290 (12)
H18A0.57580.67781.02190.044*
H18B0.70660.68241.00500.044*
H18C0.60460.62960.91680.044*
C190.6776 (5)0.7611 (5)0.7925 (5)0.0467 (16)
H19A0.66670.80910.73840.070*
H19B0.65890.70660.75080.070*
H19C0.76030.75990.83900.070*
U11U22U33U12U13U23
U0.01231 (9)0.01200 (8)0.01301 (9)−0.00072 (6)0.00096 (6)−0.00015 (7)
S10.0401 (10)0.0365 (9)0.0277 (9)−0.0149 (8)0.0128 (8)−0.0043 (8)
S20.0302 (7)0.0166 (6)0.0228 (6)−0.0051 (5)−0.0073 (5)−0.0024 (5)
O10.0220 (16)0.0111 (14)0.0189 (16)−0.0001 (12)0.0067 (14)0.0000 (13)
O20.0299 (18)0.0282 (18)0.0153 (16)−0.0136 (15)−0.0002 (15)0.0032 (15)
O30.0139 (15)0.0169 (15)0.0200 (16)0.0015 (13)0.0043 (13)0.0003 (14)
O40.0142 (15)0.0110 (14)0.0210 (16)−0.0005 (12)−0.0025 (13)−0.0033 (13)
O50.0246 (17)0.0159 (16)0.0203 (17)0.0008 (13)−0.0027 (15)−0.0029 (14)
N10.0130 (17)0.0141 (18)0.0143 (18)−0.0002 (14)0.0000 (15)0.0009 (16)
N20.024 (2)0.021 (2)0.015 (2)−0.0050 (17)−0.0008 (18)−0.0024 (18)
C8'0.024 (2)0.021 (2)0.015 (2)−0.0050 (17)−0.0008 (18)−0.0024 (18)
N30.0130 (17)0.0159 (18)0.0138 (18)−0.0002 (15)0.0001 (15)0.0008 (16)
C10.0110 (19)0.015 (2)0.014 (2)0.0033 (17)−0.0005 (18)0.0018 (18)
C20.024 (2)0.014 (2)0.020 (2)−0.0011 (18)0.006 (2)0.0013 (19)
C30.021 (2)0.015 (2)0.026 (3)−0.0033 (18)0.008 (2)0.005 (2)
C40.020 (2)0.021 (2)0.019 (2)0.0057 (19)0.010 (2)0.004 (2)
C50.020 (2)0.018 (2)0.022 (2)0.0042 (18)0.010 (2)0.003 (2)
C60.016 (2)0.014 (2)0.015 (2)0.0026 (17)0.0004 (18)0.0012 (18)
C70.017 (2)0.013 (2)0.012 (2)−0.0002 (17)0.0006 (18)−0.0017 (18)
N2'0.021 (2)0.018 (2)0.022 (2)−0.0031 (19)−0.007 (2)0.003 (2)
C80.021 (2)0.018 (2)0.022 (2)−0.0031 (19)−0.007 (2)0.003 (2)
C90.013 (3)0.026 (3)0.033 (4)−0.008 (3)0.000 (3)−0.005 (3)
C100.035 (4)0.046 (4)0.041 (4)−0.009 (3)0.008 (3)−0.001 (4)
C110.012 (2)0.015 (2)0.020 (2)−0.0007 (17)−0.0003 (19)0.0026 (19)
C120.017 (2)0.019 (2)0.017 (2)0.0047 (18)0.0018 (19)0.004 (2)
C130.020 (2)0.028 (3)0.024 (3)0.001 (2)0.004 (2)0.002 (2)
C140.025 (3)0.041 (3)0.024 (3)0.001 (2)0.012 (2)0.009 (2)
C150.037 (3)0.030 (3)0.017 (2)0.013 (2)0.009 (2)0.003 (2)
C160.033 (3)0.021 (2)0.015 (2)0.001 (2)−0.002 (2)0.001 (2)
C170.024 (2)0.012 (2)0.017 (2)0.0016 (18)0.001 (2)0.0013 (19)
C180.032 (3)0.019 (2)0.026 (3)0.002 (2)−0.009 (2)0.000 (2)
C190.034 (3)0.066 (4)0.036 (3)−0.020 (3)0.004 (3)−0.007 (3)
U—O12.267 (3)C9—C101.494 (9)
U—O22.233 (3)C9—H9A0.9900
U—O31.787 (3)C9—H9B0.9900
U—O41.792 (3)C9'—C10'1.493 (13)
U—O52.395 (3)C9'—H9'A0.9900
U—N12.547 (4)C9'—H9'B0.9900
U—N32.603 (4)C10—H10A0.9800
S1—C91.821 (6)C10—H10B0.9800
S1'—C9'1.819 (12)C10—H10C0.9800
S2—O51.532 (3)C10'—H10D0.9800
S2—C181.773 (5)C10'—H10E0.9800
S2—C191.779 (6)C10'—H10F0.9800
O1—C11.316 (5)C11—C121.440 (6)
O2—C171.310 (6)C11—H110.9500
N1—C71.312 (5)C12—C131.407 (7)
N1—N2'1.415 (5)C12—C171.419 (6)
N2—N31.402 (5)C13—C141.377 (7)
N3—C111.292 (6)C13—H130.9500
C1—C21.414 (6)C14—C151.393 (7)
C1—C61.419 (6)C14—H140.9500
C2—C31.379 (6)C15—C161.373 (7)
C2—H20.9500C15—H150.9500
C3—C41.398 (6)C16—C171.409 (6)
C3—H30.9500C16—H160.9500
C4—C51.358 (6)C18—H18A0.9800
C4—H40.9500C18—H18B0.9800
C5—C61.425 (6)C18—H18C0.9800
C5—H50.9500C19—H19A0.9800
C6—C71.437 (6)C19—H19B0.9800
C7—H70.9500C19—H19C0.9800
O3—U—O4177.84 (14)S1—C9—H9A108.7
O3—U—O294.71 (13)C10—C9—H9B108.7
O4—U—O287.36 (13)S1—C9—H9B108.7
O3—U—O189.60 (12)H9A—C9—H9B107.6
O4—U—O188.65 (12)C10'—C9'—S1'124 (2)
O2—U—O1160.62 (11)C10'—C9'—H9'A106.4
O3—U—O589.31 (12)S1'—C9'—H9'A106.4
O4—U—O591.63 (12)C10'—C9'—H9'B106.4
O2—U—O581.36 (11)S1'—C9'—H9'B106.4
O1—U—O579.81 (11)H9'A—C9'—H9'B106.5
O3—U—N195.21 (13)C9—C10—H10A109.5
O4—U—N183.00 (12)C9—C10—H10B109.5
O2—U—N1128.10 (12)H10A—C10—H10B109.5
O1—U—N170.05 (11)C9—C10—H10C109.5
O5—U—N1149.45 (11)H10A—C10—H10C109.5
O3—U—N381.27 (12)H10B—C10—H10C109.5
O4—U—N398.90 (12)C9'—C10'—H10D109.5
O2—U—N369.45 (11)C9'—C10'—H10E109.5
O1—U—N3129.92 (11)H10D—C10'—H10E109.5
O5—U—N3148.30 (11)C9'—C10'—H10F109.5
N1—U—N362.04 (11)H10D—C10'—H10F109.5
O5—S2—C18106.6 (2)H10E—C10'—H10F109.5
O5—S2—C19105.3 (2)N3—C11—C12127.3 (4)
C18—S2—C1998.3 (3)N3—C11—H11116.3
C1—O1—U130.0 (3)C12—C11—H11116.3
C17—O2—U142.8 (3)C13—C12—C17119.5 (4)
S2—O5—U133.10 (18)C13—C12—C11117.6 (4)
C7—N1—N2'116.1 (4)C17—C12—C11122.8 (4)
C7—N1—U123.5 (3)C14—C13—C12121.2 (5)
N2'—N1—U119.1 (3)C14—C13—H13119.4
C11—N3—N2111.4 (4)C12—C13—H13119.4
C11—N3—U128.4 (3)C13—C14—C15119.0 (5)
N2—N3—U119.0 (3)C13—C14—H14120.5
O1—C1—C2120.0 (4)C15—C14—H14120.5
O1—C1—C6121.8 (4)C16—C15—C14121.4 (5)
C2—C1—C6118.1 (4)C16—C15—H15119.3
C3—C2—C1120.4 (4)C14—C15—H15119.3
C3—C2—H2119.8C15—C16—C17120.8 (5)
C1—C2—H2119.8C15—C16—H16119.6
C2—C3—C4121.4 (4)C17—C16—H16119.6
C2—C3—H3119.3O2—C17—C16120.7 (4)
C4—C3—H3119.3O2—C17—C12121.2 (4)
C5—C4—C3119.7 (4)C16—C17—C12118.1 (4)
C5—C4—H4120.2S2—C18—H18A109.5
C3—C4—H4120.2S2—C18—H18B109.5
C4—C5—C6120.9 (4)H18A—C18—H18B109.5
C4—C5—H5119.5S2—C18—H18C109.5
C6—C5—H5119.5H18A—C18—H18C109.5
C5—C6—C1119.5 (4)H18B—C18—H18C109.5
C5—C6—C7117.3 (4)S2—C19—H19A109.5
C1—C6—C7122.9 (4)S2—C19—H19B109.5
N1—C7—C6126.2 (4)H19A—C19—H19B109.5
N1—C7—H7116.9S2—C19—H19C109.5
C6—C7—H7116.9H19A—C19—H19C109.5
C10—C9—S1114.2 (4)H19B—C19—H19C109.5
C10—C9—H9A108.7
O3—U—O1—C1−149.9 (3)O4—U—N3—N2−89.6 (3)
O4—U—O1—C128.9 (3)O2—U—N3—N2−173.4 (3)
O2—U—O1—C1107.0 (4)O1—U—N3—N26.1 (3)
O5—U—O1—C1120.8 (3)O5—U—N3—N2162.5 (3)
N1—U—O1—C1−54.2 (3)N1—U—N3—N2−12.5 (3)
N3—U—O1—C1−71.6 (4)U—O1—C1—C2−135.9 (3)
O3—U—O2—C1743.8 (5)U—O1—C1—C646.5 (5)
O4—U—O2—C17−135.5 (5)O1—C1—C2—C3−177.2 (4)
O1—U—O2—C17146.2 (4)C6—C1—C2—C30.5 (6)
O5—U—O2—C17132.4 (5)C1—C2—C3—C40.4 (7)
N1—U—O2—C17−56.6 (5)C2—C3—C4—C50.1 (7)
N3—U—O2—C17−35.0 (5)C3—C4—C5—C6−1.4 (7)
C18—S2—O5—U−46.1 (3)C4—C5—C6—C12.2 (7)
C19—S2—O5—U57.7 (3)C4—C5—C6—C7175.9 (4)
O3—U—O5—S2170.9 (3)O1—C1—C6—C5175.9 (4)
O4—U—O5—S2−11.0 (3)C2—C1—C6—C5−1.7 (6)
O2—U—O5—S276.1 (3)O1—C1—C6—C72.6 (6)
O1—U—O5—S2−99.3 (3)C2—C1—C6—C7−175.1 (4)
N1—U—O5—S2−90.0 (3)N2'—N1—C7—C6171.9 (4)
N3—U—O5—S298.9 (3)U—N1—C7—C6−21.1 (6)
O3—U—N1—C7127.2 (3)C5—C6—C7—N1175.5 (4)
O4—U—N1—C7−51.6 (3)C1—C6—C7—N1−11.0 (7)
O2—U—N1—C7−132.7 (3)N2—N3—C11—C12−177.0 (4)
O1—U—N1—C739.5 (3)U—N3—C11—C12−9.7 (6)
O5—U—N1—C729.7 (4)N3—C11—C12—C13173.4 (4)
N3—U—N1—C7−155.6 (4)N3—C11—C12—C17−6.6 (7)
O3—U—N1—N2'−66.2 (3)C17—C12—C13—C140.9 (7)
O4—U—N1—N2'115.1 (3)C11—C12—C13—C14−179.2 (4)
O2—U—N1—N2'34.0 (3)C12—C13—C14—C15−1.8 (7)
O1—U—N1—N2'−153.8 (3)C13—C14—C15—C160.7 (8)
O5—U—N1—N2'−163.7 (3)C14—C15—C16—C171.3 (7)
N3—U—N1—N2'11.1 (3)U—O2—C17—C16−148.3 (4)
O3—U—N3—C11−78.3 (4)U—O2—C17—C1232.4 (7)
O4—U—N3—C11103.9 (4)C15—C16—C17—O2178.5 (4)
O2—U—N3—C1120.1 (3)C15—C16—C17—C12−2.2 (7)
O1—U—N3—C11−160.4 (3)C13—C12—C17—O2−179.6 (4)
O5—U—N3—C11−4.1 (5)C11—C12—C17—O20.4 (7)
N1—U—N3—C11−179.0 (4)C13—C12—C17—C161.1 (6)
O3—U—N3—N288.2 (3)C11—C12—C17—C16−178.8 (4)
D—H···AD—HH···AD···AD—H···A
C5—H5···O4i0.952.483.322 (5)147
Table 1

Selected bond lengths (Å)

U—O12.267 (3)
U—O22.233 (3)
U—O31.787 (3)
U—O41.792 (3)
U—O52.395 (3)
U—N12.547 (4)
U—N32.603 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O4i0.952.483.322 (5)147

Symmetry code: (i) .

  2 in total

1.  Synthesis, X-ray crystal structures, thermal and electrochemical properties of thiosemicarbazidatodioxouranium(VI) complexes.

Authors:  Musa Sahin; Atıf Koca; Namık Ozdemir; Muharrem Dinçer; Orhan Büyükgüngör; Tülay Bal-Demirci; Bahri Ulküseven
Journal:  Dalton Trans       Date:  2010-10-04       Impact factor: 4.390

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total
  2 in total

1.  (Butan-2-ol-κO)[2-({(ethyl-sulfan-yl)[2-(2-oxidobenzyl-idene-κO)hydrazinyl-idene-κN]meth-yl}imino-meth-yl)phenolato-κO]dioxidouranium(VI).

Authors:  Reza Takjoo; Atefeh Najafi; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10

2.  {4-Bromo-2-[(2-{(ethyl-sulfan-yl)[(2-oxidobenzyl-idene-κO)amino-κN]methylidene}hydrazinyl-idene-κN)meth-yl]phenolato-κO}(butan-2-ol-κO)dioxidouranium(VI).

Authors:  Reza Takjoo; Mehdi Ahmadi; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.