Literature DB >> 22410332

A convex model for nonnegative matrix factorization and dimensionality reduction on physical space.

Ernie Esser1, Michael Möller, Stanley Osher, Guillermo Sapiro, Jack Xin.   

Abstract

A collaborative convex framework for factoring a data matrix X into a nonnegative product AS , with a sparse coefficient matrix S, is proposed. We restrict the columns of the dictionary matrix A to coincide with certain columns of the data matrix X, thereby guaranteeing a physically meaningful dictionary and dimensionality reduction. We use l(1, ∞) regularization to select the dictionary from the data and show that this leads to an exact convex relaxation of l(0) in the case of distinct noise-free data. We also show how to relax the restriction-to- X constraint by initializing an alternating minimization approach with the solution of the convex model, obtaining a dictionary close to but not necessarily in X. We focus on applications of the proposed framework to hyperspectral endmember and abundance identification and also show an application to blind source separation of nuclear magnetic resonance data.

Year:  2012        PMID: 22410332     DOI: 10.1109/TIP.2012.2190081

Source DB:  PubMed          Journal:  IEEE Trans Image Process        ISSN: 1057-7149            Impact factor:   10.856


  3 in total

1.  Morphologically constrained spectral unmixing by dictionary learning for multiplex fluorescence microscopy.

Authors:  Murad Megjhani; Pedro Correa de Sampaio; Julienne Leigh Carstens; Raghu Kalluri; Badrinath Roysam
Journal:  Bioinformatics       Date:  2017-07-15       Impact factor: 6.937

2.  A Bregman-proximal point algorithm for robust non-negative matrix factorization with possible missing values and outliers - application to gene expression analysis.

Authors:  Stéphane Chrétien; Christophe Guyeux; Bastien Conesa; Régis Delage-Mouroux; Michèle Jouvenot; Philippe Huetz; Françoise Descôtes
Journal:  BMC Bioinformatics       Date:  2016-08-31       Impact factor: 3.169

3.  Convex Analysis of Mixtures for Separating Non-negative Well-grounded Sources.

Authors:  Yitan Zhu; Niya Wang; David J Miller; Yue Wang
Journal:  Sci Rep       Date:  2016-12-06       Impact factor: 4.379

  3 in total

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