Literature DB >> 22408246

The complete genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 contains a gene cluster for nonribosomal synthesis of iturin A.

Jochen Blom1, Christian Rueckert, Ben Niu, Qi Wang, Rainer Borriss.   

Abstract

The genome of the rhizobacterium Bacillus amyloliquefaciens subsp. plantarum CAU B946 was 4.02 Mb in size and harbored 3,823 genes (coding sequences [CDS]). Nine giant gene clusters were dedicated to nonribosomal synthesis of antimicrobial compounds. Remarkably, strain CAU B946 possessed a gene cluster involved in synthesis of iturin A.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22408246      PMCID: PMC3302471          DOI: 10.1128/JB.06762-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  16 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  REGANOR: a gene prediction server for prokaryotic genomes and a database of high quality gene predictions for prokaryotes.

Authors:  Burkhard Linke; Alice C McHardy; Heiko Neuweger; Lutz Krause; Folker Meyer
Journal:  Appl Bioinformatics       Date:  2006

3.  Complete genome sequence of Bacillus amyloliquefaciens XH7, which exhibits production of purine nucleosides.

Authors:  Huilin Yang; Yuling Liao; Bin Wang; Ying Lin; Li Pan
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

4.  Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons.

Authors:  Rainer Borriss; Xiao-Hua Chen; Christian Rueckert; Jochen Blom; Anke Becker; Birgit Baumgarth; Ben Fan; Rüdiger Pukall; Peter Schumann; Cathrin Spröer; Helmut Junge; Joachim Vater; Alfred Pühler; Hans-Peter Klenk
Journal:  Int J Syst Evol Microbiol       Date:  2010-09-03       Impact factor: 2.747

5.  Complete genome sequence of Bacillus amyloliquefaciens LL3, which exhibits glutamic acid-independent production of poly-γ-glutamic acid.

Authors:  Weitao Geng; Mingfeng Cao; Cunjiang Song; Hui Xie; Li Liu; Chao Yang; Jun Feng; Wei Zhang; Yinghong Jin; Yang Du; Shufang Wang
Journal:  J Bacteriol       Date:  2011-05-06       Impact factor: 3.490

6.  Structural and functional characterization of three polyketide synthase gene clusters in Bacillus amyloliquefaciens FZB 42.

Authors:  Xiao-Hua Chen; Joachim Vater; Jörn Piel; Peter Franke; Romy Scholz; Kathrin Schneider; Alexandra Koumoutsi; Gabriele Hitzeroth; Nicolas Grammel; Axel W Strittmatter; Gerhard Gottschalk; Roderich D Süssmuth; Rainer Borriss
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

7.  Structural and functional characterization of gene clusters directing nonribosomal synthesis of bioactive cyclic lipopeptides in Bacillus amyloliquefaciens strain FZB42.

Authors:  Alexandra Koumoutsi; Xiao-Hua Chen; Anke Henne; Heiko Liesegang; Gabriele Hitzeroth; Peter Franke; Joachim Vater; Rainer Borriss
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

8.  Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42.

Authors:  Xiao Hua Chen; Alexandra Koumoutsi; Romy Scholz; Andreas Eisenreich; Kathrin Schneider; Isabelle Heinemeyer; Burkhard Morgenstern; Björn Voss; Wolfgang R Hess; Oleg Reva; Helmut Junge; Birgit Voigt; Peter R Jungblut; Joachim Vater; Roderich Süssmuth; Heiko Liesegang; Axel Strittmatter; Gerhard Gottschalk; Rainer Borriss
Journal:  Nat Biotechnol       Date:  2007-08-19       Impact factor: 54.908

9.  Tryptophan-dependent production of indole-3-acetic acid (IAA) affects level of plant growth promotion by Bacillus amyloliquefaciens FZB42.

Authors:  ElSorra E Idris; Domingo J Iglesias; Manuel Talon; Rainer Borriss
Journal:  Mol Plant Microbe Interact       Date:  2007-06       Impact factor: 4.171

10.  Macrolactin is the polyketide biosynthesis product of the pks2 cluster of Bacillus amyloliquefaciens FZB42.

Authors:  Kathrin Schneider; Xiao-Hua Chen; Joachim Vater; Peter Franke; Graeme Nicholson; Rainer Borriss; Roderich D Süssmuth
Journal:  J Nat Prod       Date:  2007-09-11       Impact factor: 4.050

View more
  14 in total

1.  Draft genome sequence of the biocontrol bacterium Bacillus amyloliquefaciens strain M27.

Authors:  Sang-Yeob Lee; Byung-Yong Kim; Jae-Hyung Ahn; Jaekyeong Song; Young-Joo Seol; Wan-Gyu Kim; Hang-Yeon Weon
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

2.  The genome of plant growth-promoting Bacillus amyloliquefaciens subsp. plantarum strain YAU B9601-Y2 contains a gene cluster for mersacidin synthesis.

Authors:  Kun Hao; Pengfei He; Jochen Blom; Christian Rueckert; Zichao Mao; Yixin Wu; Yueqiu He; Rainer Borriss
Journal:  J Bacteriol       Date:  2012-06       Impact factor: 3.490

3.  Molecular analysis of genes involved in chitin degradation from the chitinolytic bacterium Bacillus velezensis.

Authors:  Dinh Minh Tran; To Uyen Huynh; Thi Huyen Nguyen; Tu Oanh Do; Quang-Vinh Nguyen; Anh Dzung Nguyen
Journal:  Antonie Van Leeuwenhoek       Date:  2022-01-10       Impact factor: 2.271

4.  Whole-Genome Shotgun Sequence of Bacillus amyloliquefaciens Strain UASWS BA1, a Bacterium Antagonistic to Plant Pathogenic Fungi.

Authors:  F Lefort; G Calmin; P Pelleteret; L Farinelli; M Osteras; J Crovadore
Journal:  Genome Announc       Date:  2014-02-06

5.  The Fusarium graminearum genome reveals more secondary metabolite gene clusters and hints of horizontal gene transfer.

Authors:  Christian M K Sieber; Wanseon Lee; Philip Wong; Martin Münsterkötter; Hans-Werner Mewes; Clemens Schmeitzl; Elisabeth Varga; Franz Berthiller; Gerhard Adam; Ulrich Güldener
Journal:  PLoS One       Date:  2014-10-15       Impact factor: 3.240

Review 6.  Biodiversity of genes encoding anti-microbial traits within plant associated microbes.

Authors:  Walaa K Mousa; Manish N Raizada
Journal:  Front Plant Sci       Date:  2015-04-10       Impact factor: 5.753

7.  Whole transcriptomic analysis of the plant-beneficial rhizobacterium Bacillus amyloliquefaciens SQR9 during enhanced biofilm formation regulated by maize root exudates.

Authors:  Nan Zhang; Dongqing Yang; Dandan Wang; Youzhi Miao; Jiahui Shao; Xuan Zhou; Zhihui Xu; Qing Li; Haichao Feng; Shuqing Li; Qirong Shen; Ruifu Zhang
Journal:  BMC Genomics       Date:  2015-09-07       Impact factor: 3.969

8.  The Rhizobacterium Bacillus amyloliquefaciens subsp. plantarum NAU-B3 Contains a Large Inversion within the Central Portion of the Genome.

Authors:  Huijun Wu; Junqing Qiao; Jochen Blom; Christian Rueckert; Oleg Reva; Xuewen Gao; Rainer Borriss
Journal:  Genome Announc       Date:  2013-11-14

9.  Complete Genome Sequence of Bacillus amyloliquefaciens Strain BH072, Isolated from Honey.

Authors:  Xin Zhao; Anne de Jong; Zhijiang Zhou; Oscar P Kuipers
Journal:  Genome Announc       Date:  2015-03-12

10.  Draft Genome Sequence of Bacillus cereus 905, a Plant Growth-Promoting Rhizobacterium of Wheat.

Authors:  Haixia Ding; Ben Niu; Haiyan Fan; Yan Li; Qi Wang
Journal:  Genome Announc       Date:  2016-06-02
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.