Literature DB >> 22402398

Archaea in metazoan diets: implications for food webs and biogeochemical cycling.

Andrew R Thurber1, Lisa A Levin, Victoria J Orphan, Jeffrey J Marlow.   

Abstract

Although the importance of trophic linkages, including 'top-down forcing', on energy flow and ecosystem productivity is recognized, the influence of metazoan grazing on Archaea and the biogeochemical processes that they mediate is unknown. Here, we test if: (1) Archaea provide a food source sufficient to allow metazoan fauna to complete their life cycle; (2) neutral lipid biomarkers (including crocetane) can be used to identify Archaea consumers; and (3) archaeal aggregates are a dietary source for methane seep metazoans. In the laboratory, we demonstrated that a dorvilleid polychaete, Ophryotrocha labronica, can complete its life cycle on two strains of Euryarchaeota with the same growth rate as when fed bacterial and eukaryotic food. Archaea were therefore confirmed as a digestible and nutritious food source sufficient to sustain metazoan populations. Both strains of Euryarchaeota used as food sources had unique lipids that were not incorporated into O. labronica tissues. At methane seeps, sulfate-reducing bacteria that form aggregations and live syntrophically with anaerobic-methane oxidizing Archaea contain isotopically and structurally unique fatty acids (FAs). These biomarkers were incorporated into tissues of an endolithofaunal dorvilleid polychaete species from Costa Rica (mean bulk δ(13)C=-92±4‰; polar lipids -116‰) documenting consumption of archaeal-bacterial aggregates. FA composition of additional soft-sediment methane seep species from Oregon and California provided evidence that consumption of archaeal-bacterial aggregates is widespread at methane seeps. This work is the first to show that Archaea are consumed by heterotrophic metazoans, a trophic process we coin as 'archivory'.

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Year:  2012        PMID: 22402398      PMCID: PMC3400411          DOI: 10.1038/ismej.2012.16

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  24 in total

1.  Multiple acquisition of methanogenic archaeal symbionts by anaerobic ciliates.

Authors:  A H van Hoek; T A van Alen; V S Sprakel; J A Leunissen; T Brigge; G D Vogels; J H Hackstein
Journal:  Mol Biol Evol       Date:  2000-02       Impact factor: 16.240

2.  Archaeal dominance in the mesopelagic zone of the Pacific Ocean.

Authors:  M B Karner; E F DeLong; D M Karl
Journal:  Nature       Date:  2001-01-25       Impact factor: 49.962

3.  Insect herbivory accelerates nutrient cycling and increases plant production.

Authors:  G E Belovsky; J B Slade
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

4.  Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis.

Authors:  V J Orphan; C H House; K U Hinrichs; K D McKeegan; E F DeLong
Journal:  Science       Date:  2001-07-20       Impact factor: 47.728

5.  Bicarbonate uptake by marine Crenarchaeota.

Authors:  Cornelia Wuchter; Stefan Schouten; Henricus T S Boschker; Jaap S Sinninghe Damsté
Journal:  FEMS Microbiol Lett       Date:  2003-02-28       Impact factor: 2.742

6.  Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments.

Authors:  Victoria J Orphan; Christopher H House; Kai-Uwe Hinrichs; Kevin D McKeegan; Edward F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

7.  Evaluation of extraction methods for recovery of fatty acids from lipid-producing microheterotrophs.

Authors:  T Lewis; P D Nichols; T A McMeekin
Journal:  J Microbiol Methods       Date:  2000-12-15       Impact factor: 2.363

8.  A marine microbial consortium apparently mediating anaerobic oxidation of methane.

Authors:  A Boetius; K Ravenschlag; C J Schubert; D Rickert; F Widdel; A Gieseke; R Amann; B B Jørgensen; U Witte; O Pfannkuche
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

9.  Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments.

Authors:  V J Orphan; K U Hinrichs; W Ussler; C K Paull; L T Taylor; S P Sylva; J M Hayes; E F Delong
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

Review 10.  Fatty acid trophic markers in the pelagic marine environment.

Authors:  Johanne Dalsgaard; Michael St John; Gerhard Kattner; Dörthe Müller-Navarra; Wilhelm Hagen
Journal:  Adv Mar Biol       Date:  2003       Impact factor: 5.143

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  9 in total

1.  Comparison of Archaeal and Bacterial Diversity in Methane Seep Carbonate Nodules and Host Sediments, Eel River Basin and Hydrate Ridge, USA.

Authors:  Olivia U Mason; David H Case; Thomas H Naehr; Raymond W Lee; Randal B Thomas; Jake V Bailey; Victoria J Orphan
Journal:  Microb Ecol       Date:  2015-05-07       Impact factor: 4.552

Review 2.  Comparative composition, diversity and trophic ecology of sediment macrofauna at vents, seeps and organic falls.

Authors:  Angelo F Bernardino; Lisa A Levin; Andrew R Thurber; Craig R Smith
Journal:  PLoS One       Date:  2012-04-04       Impact factor: 3.240

3.  Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps.

Authors:  Lisa A Levin; Guillermo F Mendoza; Benjamin M Grupe; Jennifer P Gonzalez; Brittany Jellison; Greg Rouse; Andrew R Thurber; Anders Waren
Journal:  PLoS One       Date:  2015-07-09       Impact factor: 3.240

4.  Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages.

Authors:  David H Case; Alexis L Pasulka; Jeffrey J Marlow; Benjamin M Grupe; Lisa A Levin; Victoria J Orphan
Journal:  MBio       Date:  2015-12-22       Impact factor: 7.867

5.  Adaptive radiation in extremophilic Dorvilleidae (Annelida): diversification of a single colonizer or multiple independent lineages?

Authors:  Daniel J Thornhill; Torsten H Struck; Brigitte Ebbe; Raymond W Lee; Guillermo F Mendoza; Lisa A Levin; Kenneth M Halanych
Journal:  Ecol Evol       Date:  2012-07-16       Impact factor: 2.912

6.  Lipid Classes and Fatty Acids in Ophryotrocha cyclops, a Dorvilleid from Newfoundland Aquaculture Sites.

Authors:  Flora Salvo; Suzanne C Dufour; Dounia Hamoutene; Christopher C Parrish
Journal:  PLoS One       Date:  2015-08-26       Impact factor: 3.240

7.  Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea.

Authors:  Amir Sapir; Adler R Dillman; Stephanie A Connon; Benjamin M Grupe; Jeroen Ingels; Manuel Mundo-Ocampo; Lisa A Levin; James G Baldwin; Victoria J Orphan; Paul W Sternberg
Journal:  Front Microbiol       Date:  2014-02-10       Impact factor: 5.640

8.  Methane Seep in Shallow-Water Permeable Sediment Harbors High Diversity of Anaerobic Methanotrophic Communities, Elba, Italy.

Authors:  S Emil Ruff; Hanna Kuhfuss; Gunter Wegener; Christian Lott; Alban Ramette; Johanna Wiedling; Katrin Knittel; Miriam Weber
Journal:  Front Microbiol       Date:  2016-03-31       Impact factor: 5.640

9.  Food-Web Complexity in Guaymas Basin Hydrothermal Vents and Cold Seeps.

Authors:  Marie Portail; Karine Olu; Stanislas F Dubois; Elva Escobar-Briones; Yves Gelinas; Lénaick Menot; Jozée Sarrazin
Journal:  PLoS One       Date:  2016-09-28       Impact factor: 3.240

  9 in total

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