Literature DB >> 22397628

On the mechanism of αC polymer formation in fibrin.

Galina Tsurupa1, Igor Pechik, Rustem I Litvinov, Roy R Hantgan, Nico Tjandra, John W Weisel, Leonid Medved.   

Abstract

Our previous studies revealed that the fibrinogen αC-domains undergo conformational changes and adopt a physiologically active conformation upon their self-association into αC polymers in fibrin. In the present study, we analyzed the mechanism of αC polymer formation and tested our hypothesis that self-association of the αC-domains occurs through the interaction between their N-terminal subdomains and may include β-hairpin swapping. Our binding experiments performed by size-exclusion chromatography and optical trap-based force spectroscopy revealed that the αC-domains self-associate exclusively through their N-terminal subdomains, while their C-terminal subdomains were found to interact with the αC-connectors that tether the αC-domains to the bulk of the molecule. This interaction should reinforce the structure of αC polymers and provide the proper orientation of their reactive residues for efficient cross-linking by factor XIIIa. Molecular modeling of self-association of the N-terminal subdomains confirmed that the hypothesized β-hairpin swapping does not impose any steric hindrance. To "freeze" the conformation of the N-terminal subdomain and prevent the hypothesized β-hairpin swapping, we introduced by site-directed mutagenesis an extra disulfide bond between two β-hairpins of the bovine Aα406-483 fragment corresponding to this subdomain. The experiments performed by circular dichroism revealed that Aα406-483 mutant containing Lys429Cys/Thr463Cys mutations preserved its β-sheet structure. However, in contrast to wild-type Aα406-483, this mutant had lower tendency for oligomerization, and its structure was not stabilized upon oligomerization, in agreement with the above hypothesis. On the basis of the results obtained and our previous findings, we propose a model of fibrin αC polymer structure and molecular mechanism of assembly.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22397628      PMCID: PMC3343699          DOI: 10.1021/bi2017848

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  47 in total

1.  Polymerization of fibrin: specificity, strength, and stability of knob-hole interactions studied at the single-molecule level.

Authors:  Rustem I Litvinov; Oleg V Gorkun; Scott F Owen; Henry Shuman; John W Weisel
Journal:  Blood       Date:  2005-07-05       Impact factor: 22.113

2.  The alphaC domains of fibrinogen affect the structure of the fibrin clot, its physical properties, and its susceptibility to fibrinolysis.

Authors:  Jean-Philippe Collet; Jennifer L Moen; Yuri I Veklich; Oleg V Gorkun; Susan T Lord; Gilles Montalescot; John W Weisel
Journal:  Blood       Date:  2005-08-09       Impact factor: 22.113

Review 3.  Fibronectin-binding proteins of gram-positive cocci.

Authors:  Ulrich Schwarz-Linek; Magnus Höök; Jennifer R Potts
Journal:  Microbes Infect       Date:  2006-05-30       Impact factor: 2.700

4.  NMR solution structure, stability, and interaction of the recombinant bovine fibrinogen alphaC-domain fragment.

Authors:  Robert A Burton; Galina Tsurupa; Roy R Hantgan; Nico Tjandra; Leonid Medved
Journal:  Biochemistry       Date:  2007-06-23       Impact factor: 3.162

5.  Direct evidence for specific interactions of the fibrinogen alphaC-domains with the central E region and with each other.

Authors:  Rustem I Litvinov; Sergiy Yakovlev; Galina Tsurupa; Oleg V Gorkun; Leonid Medved; John W Weisel
Journal:  Biochemistry       Date:  2007-07-13       Impact factor: 3.162

6.  Noncovalent interaction of alpha(2)-antiplasmin with fibrin(ogen): localization of alpha(2)-antiplasmin-binding sites.

Authors:  Galina Tsurupa; Sergiy Yakovlev; Patrick McKee; Leonid Medved
Journal:  Biochemistry       Date:  2010-09-07       Impact factor: 3.162

7.  Molecular weight fibrinogen variants determine angiogenesis rate in a fibrin matrix in vitro and in vivo.

Authors:  E L Kaijzel; P Koolwijk; M G M van Erck; V W M van Hinsbergh; M P M de Maat
Journal:  J Thromb Haemost       Date:  2006-09       Impact factor: 5.824

8.  Structure, stability, and interaction of the fibrin(ogen) alphaC-domains.

Authors:  Galina Tsurupa; Roy R Hantgan; Robert A Burton; Igor Pechik; Nico Tjandra; Leonid Medved
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

9.  Recommendations for nomenclature on fibrinogen and fibrin.

Authors:  L Medved; J W Weisel
Journal:  J Thromb Haemost       Date:  2008-11-25       Impact factor: 5.824

10.  Crystal structures of fibronectin-binding sites from Staphylococcus aureus FnBPA in complex with fibronectin domains.

Authors:  Richard J Bingham; Enrique Rudiño-Piñera; Nicola A G Meenan; Ulrich Schwarz-Linek; Johan P Turkenburg; Magnus Höök; Elspeth F Garman; Jennifer R Potts
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-19       Impact factor: 11.205

View more
  23 in total

1.  Oxidation-induced destabilization of the fibrinogen αC-domain dimer investigated by molecular dynamics simulations.

Authors:  Eric N Pederson; Gianluca Interlandi
Journal:  Proteins       Date:  2019-06-14

2.  Post-translational oxidative modification of fibrinogen is associated with coagulopathy after traumatic injury.

Authors:  Nathan J White; Yi Wang; Xiaoyun Fu; Jessica C Cardenas; Erika J Martin; Donald F Brophy; Charles E Wade; Xu Wang; Alexander E St John; Esther B Lim; Susan A Stern; Kevin R Ward; José A López; Dominic Chung
Journal:  Free Radic Biol Med       Date:  2016-04-20       Impact factor: 7.376

3.  Limited proteolysis of fibrinogen by fibrinogenase from Echis multisquamatis venom.

Authors:  V O Chernyshenko
Journal:  Protein J       Date:  2015-04       Impact factor: 2.371

Review 4.  Mechanisms of fibrin polymerization and clinical implications.

Authors:  John W Weisel; Rustem I Litvinov
Journal:  Blood       Date:  2013-01-10       Impact factor: 22.113

5.  Fibrin Networks Support Recurring Mechanical Loads by Adapting their Structure across Multiple Scales.

Authors:  Nicholas A Kurniawan; Bart E Vos; Andreas Biebricher; Gijs J L Wuite; Erwin J G Peterman; Gijsje H Koenderink
Journal:  Biophys J       Date:  2016-09-06       Impact factor: 4.033

6.  Effect of fibrinogen, fibrin, and fibrin degradation products on transendothelial migration of leukocytes.

Authors:  Sergiy Yakovlev; Leonid Medved
Journal:  Thromb Res       Date:  2017-11-21       Impact factor: 3.944

Review 7.  Fibrin Formation, Structure and Properties.

Authors:  John W Weisel; Rustem I Litvinov
Journal:  Subcell Biochem       Date:  2017

Review 8.  Fibrin mechanical properties and their structural origins.

Authors:  Rustem I Litvinov; John W Weisel
Journal:  Matrix Biol       Date:  2016-08-20       Impact factor: 11.583

9.  Ranking reactive glutamines in the fibrinogen αC region that are targeted by blood coagulant factor XIII.

Authors:  Kelly Njine Mouapi; Jacob D Bell; Kerrie A Smith; Robert A S Ariëns; Helen Philippou; Muriel C Maurer
Journal:  Blood       Date:  2016-03-07       Impact factor: 22.113

10.  Morphometric characterization of fibrinogen's αC regions and their role in fibrin self-assembly and molecular organization.

Authors:  Anna D Protopopova; Rustem I Litvinov; Dennis K Galanakis; Chandrasekaran Nagaswami; Nikolay A Barinov; Alexander R Mukhitov; Dmitry V Klinov; John W Weisel
Journal:  Nanoscale       Date:  2017-09-21       Impact factor: 7.790

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.