Literature DB >> 22393332

Immune-mediated attenuation of HIV-1.

Denis R Chopera1, Jaclyn K Wright, Mark A Brockman, Zabrina L Brumme.   

Abstract

Immune escape mutations selected by human leukocyte antigen class I-restricted CD8(+) cytotoxic T lymphocytes (CTLs) can result in biologically and clinically relevant costs to HIV-1 replicative fitness. This phenomenon may be exploited to design an HIV-1 vaccine capable of stimulating effective CTL responses against highly conserved, mutationally constrained viral regions, where immune escape could occur only at substantial functional costs. Such a vaccine might 'channel' HIV-1 evolution towards a less-fit state, thus lowering viral load set points, attenuating the infection course and potentially reducing the risk of transmission. A major barrier to this approach, however, is the accumulation of immune escape variants at the population level, possibly leading to the loss of immunogenic CTL epitopes and diminished vaccine-induced cellular immune responses as the epidemic progresses. Here, we review the evidence supporting CTL-driven replicative defects in HIV-1 and consider the implications of this work for CTL-based vaccines designed to attenuate the infection course.

Entities:  

Year:  2011        PMID: 22393332      PMCID: PMC3292540          DOI: 10.2217/fvl.11.68

Source DB:  PubMed          Journal:  Future Virol        ISSN: 1746-0794            Impact factor:   1.831


  152 in total

1.  Gradual adaptation of HIV to human host populations: good or bad news?

Authors:  Christian Brander; Bruce D Walker
Journal:  Nat Med       Date:  2003-11       Impact factor: 53.440

2.  Fitness costs limit viral escape from cytotoxic T lymphocytes at a structurally constrained epitope.

Authors:  Fred W Peyerl; Heidi S Bazick; Michael H Newberg; Dan H Barouch; Joseph Sodroski; Norman L Letvin
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

3.  HIV vaccine failure prompts Merck to halt trial.

Authors: 
Journal:  Nature       Date:  2007-09-27       Impact factor: 49.962

4.  Compensatory mutations are repeatable and clustered within proteins.

Authors:  Brad H Davis; Art F Y Poon; Michael C Whitlock
Journal:  Proc Biol Sci       Date:  2009-02-25       Impact factor: 5.349

Review 5.  Rationale for maintenance of the M184v resistance mutation in human immunodeficiency virus type 1 reverse transcriptase in treatment experienced patients.

Authors:  D Turner; B G Brenner; J P Routy; M Petrella; M A Wainberg
Journal:  New Microbiol       Date:  2004-04       Impact factor: 2.479

6.  Gag-specific cytotoxic T-lymphocyte-based control of primary simian immunodeficiency virus replication in a vaccine trial.

Authors:  Miki Kawada; Tetsuo Tsukamoto; Hiroyuki Yamamoto; Nami Iwamoto; Kyoko Kurihara; Akiko Takeda; Chikaya Moriya; Hiroaki Takeuchi; Hirofumi Akari; Tetsuro Matano
Journal:  J Virol       Date:  2008-07-30       Impact factor: 5.103

7.  HIV-specific cytotoxic T lymphocytes in seropositive individuals.

Authors:  B D Walker; S Chakrabarti; B Moss; T J Paradis; T Flynn; A G Durno; R S Blumberg; J C Kaplan; M S Hirsch; R T Schooley
Journal:  Nature       Date:  1987 Jul 23-29       Impact factor: 49.962

8.  Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing.

Authors:  Jesus F Salazar-Gonzalez; Elizabeth Bailes; Kimmy T Pham; Maria G Salazar; M Brad Guffey; Brandon F Keele; Cynthia A Derdeyn; Paul Farmer; Eric Hunter; Susan Allen; Olivier Manigart; Joseph Mulenga; Jeffrey A Anderson; Ronald Swanstrom; Barton F Haynes; Gayathri S Athreya; Bette T M Korber; Paul M Sharp; George M Shaw; Beatrice H Hahn
Journal:  J Virol       Date:  2008-02-06       Impact factor: 5.103

9.  Genetic impact of vaccination on breakthrough HIV-1 sequences from the STEP trial.

Authors:  Morgane Rolland; Sodsai Tovanabutra; Allan C deCamp; Nicole Frahm; Peter B Gilbert; Eric Sanders-Buell; Laura Heath; Craig A Magaret; Meera Bose; Andrea Bradfield; Annemarie O'Sullivan; Jacqueline Crossler; Teresa Jones; Marty Nau; Kim Wong; Hong Zhao; Dana N Raugi; Stephanie Sorensen; Julia N Stoddard; Brandon S Maust; Wenjie Deng; John Hural; Sheri Dubey; Nelson L Michael; John Shiver; Lawrence Corey; Fusheng Li; Steve G Self; Jerome Kim; Susan Buchbinder; Danilo R Casimiro; Michael N Robertson; Ann Duerr; M Juliana McElrath; Francine E McCutchan; James I Mullins
Journal:  Nat Med       Date:  2011-02-27       Impact factor: 53.440

10.  Transmission and accumulation of CTL escape variants drive negative associations between HIV polymorphisms and HLA.

Authors:  Alasdair Leslie; Daniel Kavanagh; Isobella Honeyborne; Katja Pfafferott; Charles Edwards; Tilly Pillay; Louise Hilton; Christina Thobakgale; Danni Ramduth; Rika Draenert; Sylvie Le Gall; Graz Luzzi; Anne Edwards; Christian Brander; Andrew K Sewell; Sarah Moore; James Mullins; Corey Moore; Simon Mallal; Nina Bhardwaj; Karina Yusim; Rodney Phillips; Paul Klenerman; Bette Korber; Photini Kiepiela; Bruce Walker; Philip Goulder
Journal:  J Exp Med       Date:  2005-03-21       Impact factor: 14.307

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  11 in total

1.  Impact of HLA-B*81-associated mutations in HIV-1 Gag on viral replication capacity.

Authors:  Jaclyn K Wright; Vanessa L Naidoo; Zabrina L Brumme; Jessica L Prince; Daniel T Claiborne; Philip J R Goulder; Mark A Brockman; Eric Hunter; Thumbi Ndung'u
Journal:  J Virol       Date:  2012-01-11       Impact factor: 5.103

2.  Correlates of protective cellular immunity revealed by analysis of population-level immune escape pathways in HIV-1.

Authors:  Jonathan M Carlson; Chanson J Brumme; Eric Martin; Jennifer Listgarten; Mark A Brockman; Anh Q Le; Celia K S Chui; Laura A Cotton; David J H F Knapp; Sharon A Riddler; Richard Haubrich; George Nelson; Nico Pfeifer; Charles E Deziel; David Heckerman; Richard Apps; Mary Carrington; Simon Mallal; P Richard Harrigan; Mina John; Zabrina L Brumme
Journal:  J Virol       Date:  2012-10-10       Impact factor: 5.103

3.  Intersubtype differences in the effect of a rare p24 gag mutation on HIV-1 replicative fitness.

Authors:  Denis R Chopera; Laura A Cotton; Alexander Zawaira; Jaclyn K Mann; Nobubelo K Ngandu; Roman Ntale; Jonathan M Carlson; Koleka Mlisana; Zenda Woodman; Debra de Assis Rosa; Eric Martin; Toshiyuki Miura; Florencia Pereyra; Bruce D Walker; Clive M Gray; Darren P Martin; Thumbi Ndung'u; Mark A Brockman; Salim Abdool Karim; Zabrina L Brumme; Carolyn Williamson
Journal:  J Virol       Date:  2012-09-26       Impact factor: 5.103

4.  Pol-Driven Replicative Capacity Impacts Disease Progression in HIV-1 Subtype C Infection.

Authors:  Doty B A Ojwach; Daniel MacMillan; Tarylee Reddy; Vladimir Novitsky; Zabrina L Brumme; Mark A Brockman; Thumbi Ndung'u; Jaclyn K Mann
Journal:  J Virol       Date:  2018-09-12       Impact factor: 5.103

5.  Vulnerable targets in HIV-1 Pol for attenuation-based vaccine design.

Authors:  Doty B A Ojwach; Paradise Madlala; Michelle Gordon; Thumbi Ndung'u; Jaclyn K Mann
Journal:  Virology       Date:  2020-12-10       Impact factor: 3.616

Review 6.  HIV-1 vaccine immunogen design strategies.

Authors:  Jaclyn K Mann; Thumbi Ndung'u
Journal:  Virol J       Date:  2015-01-24       Impact factor: 4.099

7.  A human immune data-informed vaccine concept elicits strong and broad T-cell specificities associated with HIV-1 control in mice and macaques.

Authors:  Beatriz Mothe; Xintao Hu; Anuska Llano; Margherita Rosati; Alex Olvera; Viraj Kulkarni; Antonio Valentin; Candido Alicea; Guy R Pilkington; Niranjan Y Sardesai; Muntsa Rocafort; Manel Crespo; Jorge Carrillo; Andrés Marco; James I Mullins; Lucy Dorrell; Tomáš Hanke; Bonaventura Clotet; George N Pavlakis; Barbara K Felber; Christian Brander
Journal:  J Transl Med       Date:  2015-02-15       Impact factor: 5.531

8.  Relevance of long-lived CD8(+) T effector memory cells for protective immunity elicited by heterologous prime-boost vaccination.

Authors:  José R Vasconcelos; Mariana R Dominguez; Adriano F Araújo; Jonatan Ersching; Cibele A Tararam; Oscar Bruna-Romero; Mauricio M Rodrigues
Journal:  Front Immunol       Date:  2012-12-04       Impact factor: 7.561

9.  The fitness landscape of HIV-1 gag: advanced modeling approaches and validation of model predictions by in vitro testing.

Authors:  Jaclyn K Mann; John P Barton; Andrew L Ferguson; Saleha Omarjee; Bruce D Walker; Arup Chakraborty; Thumbi Ndung'u
Journal:  PLoS Comput Biol       Date:  2014-08-07       Impact factor: 4.475

10.  Genetic determinants of Nef-mediated CD4 and HLA class I down-regulation differences between HIV-1 subtypes B and C.

Authors:  Jaclyn K Mann; Saleha Omarjee; Phumzile Khumalo; Thumbi Ndung'u
Journal:  Virol J       Date:  2015-11-25       Impact factor: 4.099

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