Literature DB >> 22391735

Characterization of a recombinant endo-type alginate lyase (Alg7D) from Saccharophagus degradans.

Hee Taek Kim1, Hyeok-Jin Ko, Nahyun Kim, Duwoon Kim, Dongho Lee, In-Geol Choi, Hee Chul Woo, Myoung Dong Kim, Kyoung Heon Kim.   

Abstract

A gene, alg7D, from Saccharophagus degradans, coding for a putative alginate lyase belonging to the family of polysaccharide lyase-7, was overexpressed in Escherichia coli. The properties of the recombinant Alg7D were characterized. The enzyme endolytically depolymerized alginate by β-elimination into oligo-alginates with degrees of polymerization of 2-5. Its activity was maximal at 50°C and pH 7 and was slightly increased in the presence of Na(+). The K(M), V(max), k(cat), and k(cat)/K(M) values were: 3 mg ml(-1), 6.2 U mg(-1), 1.9 × 10(-2) s(-1), and 6.3 × 10(-3) mg(-1 )ml s(-1), respectively.

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Year:  2012        PMID: 22391735     DOI: 10.1007/s10529-012-0876-9

Source DB:  PubMed          Journal:  Biotechnol Lett        ISSN: 0141-5492            Impact factor:   2.461


  27 in total

Review 1.  Alginate lyase: Review of major sources and classification, properties, structure-function analysis and applications.

Authors:  Benwei Zhu; Heng Yin
Journal:  Bioengineered       Date:  2015-04-01       Impact factor: 3.269

Review 2.  Research and development for algae-based technologies in Korea: a review of algae biofuel production.

Authors:  Ji Won Hong; Seung-Woo Jo; Ho-Sung Yoon
Journal:  Photosynth Res       Date:  2014-02-05       Impact factor: 3.573

3.  Characterization of a New Cold-Adapted and Salt-Activated Polysaccharide Lyase Family 7 Alginate Lyase from Pseudoalteromonas sp. SM0524.

Authors:  Xiu-Lan Chen; Sheng Dong; Fei Xu; Fang Dong; Ping-Yi Li; Xi-Ying Zhang; Bai-Cheng Zhou; Yu-Zhong Zhang; Bin-Bin Xie
Journal:  Front Microbiol       Date:  2016-07-19       Impact factor: 5.640

4.  Expression and characterization of a new heat-stable endo-type alginate lyase from deep-sea bacterium Flammeovirga sp. NJ-04.

Authors:  Benwei Zhu; Fang Ni; Yun Sun; Zhong Yao
Journal:  Extremophiles       Date:  2017-09-23       Impact factor: 2.395

5.  Discovery of a Novel Alginate Lyase from Nitratiruptor sp. SB155-2 Thriving at Deep-sea Hydrothermal Vents and Identification of the Residues Responsible for Its Heat Stability.

Authors:  Akira Inoue; Moe Anraku; Satoshi Nakagawa; Takao Ojima
Journal:  J Biol Chem       Date:  2016-05-26       Impact factor: 5.157

Review 6.  Overview on Microbial Enzymatic Production of Algal Oligosaccharides for Nutraceutical Applications.

Authors:  Ashok S Jagtap; Cathrine S Manohar
Journal:  Mar Biotechnol (NY)       Date:  2021-03-24       Impact factor: 3.619

Review 7.  Diversity of Three-Dimensional Structures and Catalytic Mechanisms of Alginate Lyases.

Authors:  Fei Xu; Peng Wang; Yu-Zhong Zhang; Xiu-Lan Chen
Journal:  Appl Environ Microbiol       Date:  2018-01-17       Impact factor: 4.792

8.  Characterization of a new alginate lyase from newly isolated Flavobacterium sp. S20.

Authors:  Lishuxin Huang; Jungang Zhou; Xiao Li; Qiang Peng; Hong Lu; Yuguang Du
Journal:  J Ind Microbiol Biotechnol       Date:  2012-10-31       Impact factor: 3.346

9.  Putative Alginate Assimilation Process of the Marine Bacterium Saccharophagus degradans 2-40 Based on Quantitative Proteomic Analysis.

Authors:  Toshiyuki Takagi; Hironobu Morisaka; Shunsuke Aburaya; Yohei Tatsukami; Kouichi Kuroda; Mitsuyoshi Ueda
Journal:  Mar Biotechnol (NY)       Date:  2015-10-12       Impact factor: 3.619

Review 10.  Degradation and Utilization of Alginate by Marine Pseudoalteromonas: a Review.

Authors:  Fei Xu; Qian-Qian Cha; Yu-Zhong Zhang; Xiu-Lan Chen
Journal:  Appl Environ Microbiol       Date:  2021-08-11       Impact factor: 4.792

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