Literature DB >> 22390411

A comparison of approaches for association studies of polymorphisms and colorectal cancer risk.

S D Ramsey1, R S Holmes, C L McDermott, D K Blough, K L Petrin, E M Poole, C M Ulrich.   

Abstract

AIM: Meta-analyses have been used to evaluate associations between polymorphisms and colorectal cancer risk, but the quality of individual studies used to inform them may vary substantially. Our aim was to apply well-established quality-control criteria to individual association studies and then compare the results of meta-analyses that included or excluded studies that did not meet these criteria.
METHOD: We used meta-analyses of studies reporting a relationship between polymorphisms and colorectal cancer published between 1996 and 2008. Polymorphism-cancer associations were derived in separate meta-analyses including only those meeting the quality-control criteria.
RESULTS: Relative ORs varied substantially between the open and restricted group meta-analyses for all variants except MTHFR 677 CT. However, the associations were modest and the direction of relative risk did not change after applying criteria. Publication bias was detected for all associations, except the restricted set of studies for GSTP1 GG.
CONCLUSION: We observed variation in calculated relative risk and changes in tests for publication bias that were dependent on the inclusion criteria used for association studies of polymorphisms and colorectal cancer. Standardizing study inclusion criteria may reduce the variation in findings for meta-analyses of gene-association studies of common diseases such as colorectal cancer.
© 2012 The Authors. Colorectal Disease © 2012 The Association of Coloproctology of Great Britain and Ireland.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22390411      PMCID: PMC3471808          DOI: 10.1111/j.1463-1318.2012.03021.x

Source DB:  PubMed          Journal:  Colorectal Dis        ISSN: 1462-8910            Impact factor:   3.788


  58 in total

1.  Associations between 5,10-methylenetetrahydrofolate reductase codon 677 and 1298 genetic polymorphisms and environmental factors with reference to susceptibility to colorectal cancer: a case-control study in an Indian population.

Authors:  Jingwen Wang; Vendhan Gajalakshmi; Jing Jiang; Kiyonori Kuriki; Sadao Suzuki; Teruo Nagaya; Seiichi Nakamura; Susumu Akasaka; Hideki Ishikawa; Shinkan Tokudome
Journal:  Int J Cancer       Date:  2006-02-15       Impact factor: 7.396

2.  Meta-analysis in clinical trials.

Authors:  R DerSimonian; N Laird
Journal:  Control Clin Trials       Date:  1986-09

3.  Glutathione S-transferases mu 1, theta 1, pi 1, alpha 1 and mu 3 genetic polymorphisms and the risk of colorectal and gastric cancers in humans.

Authors:  Carmen Martínez; Felipe Martín; Juana M Fernández; Elena García-Martín; Javier Sastre; Manuel Díaz-Rubio; José Ag Agúndez; José M Ladero
Journal:  Pharmacogenomics       Date:  2006-07       Impact factor: 2.533

4.  Operating characteristics of a rank correlation test for publication bias.

Authors:  C B Begg; M Mazumdar
Journal:  Biometrics       Date:  1994-12       Impact factor: 2.571

5.  One-carbon metabolism related gene polymorphisms interact with alcohol drinking to influence the risk of colorectal cancer in Japan.

Authors:  Keitaro Matsuo; Hidemi Ito; Kenji Wakai; Kaoru Hirose; Toshiko Saito; Takeshi Suzuki; Tomoyuki Kato; Takashi Hirai; Yukihide Kanemitsu; Hiroshi Hamajima; Kazuo Tajima
Journal:  Carcinogenesis       Date:  2005-07-28       Impact factor: 4.944

6.  Glutathione S-transferase T1 polymorphisms are associated with outcome in colorectal cancer.

Authors:  R Rajagopal; M Deakin; A S Fawole; J B Elder; J Elder; V Smith; R C Strange; A A Fryer
Journal:  Carcinogenesis       Date:  2005-07-28       Impact factor: 4.944

7.  Polymorphisms in sulfotransferase 1A1 and glutathione S-transferase P1 genes in relation to colorectal cancer risk and patients' survival.

Authors:  Xiao-Feng Sun; Ahmad Ahmadi; Gunnar Arbman; Asa Wallin; Daniel Asklid; Hong Zhang
Journal:  World J Gastroenterol       Date:  2005-11-21       Impact factor: 5.742

8.  Folate, vitamin B6, vitamin B12, and vitamin B2 intake, genetic polymorphisms of related enzymes, and risk of colorectal cancer in a hospital-based case-control study in Japan.

Authors:  Tetsuya Otani; Motoki Iwasaki; Tomoyuki Hanaoka; Minatsu Kobayashi; Junko Ishihara; Syusuke Natsukawa; Kozo Shaura; Yoichi Koizumi; Yoshio Kasuga; Kimio Yoshimura; Teruhiko Yoshida; Shoichiro Tsugane
Journal:  Nutr Cancer       Date:  2005       Impact factor: 2.900

9.  MTHFR C677T and A1298C polymorphisms: diet, estrogen, and risk of colon cancer.

Authors:  Karen Curtin; Jeannette Bigler; Martha L Slattery; Bette Caan; John D Potter; Cornelia M Ulrich
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2004-02       Impact factor: 4.254

10.  Polyadenylation polymorphism in the acetyltransferase 1 gene (NAT1) increases risk of colorectal cancer.

Authors:  D A Bell; E A Stephens; T Castranio; D M Umbach; M Watson; M Deakin; J Elder; C Hendrickse; H Duncan; R C Strange
Journal:  Cancer Res       Date:  1995-08-15       Impact factor: 12.701

View more
  3 in total

1.  Deletion and Single Nucleotide Polymorphisms in Common Glutathione-S Transferases Contribute to Colorectal Cancer Development.

Authors:  Milica Lj Stojkovic Lalosevic; Vesna M Coric; Tatjana D Pekmezovic; Tatjana P Simic; Marija S Pljesa Ercegovac; Aleksandra R Pavlovic Markovic; Zoran V Krivokapic
Journal:  Pathol Oncol Res       Date:  2019-01-29       Impact factor: 3.201

2.  Association between the MTHFR C677T polymorphism and risk of cancer: evidence from 446 case-control studies.

Authors:  Shu-Zhe Xie; Zhi-Zhong Liu; Jun-hua Yu; Li Liu; Wei Wang; Dao-Lin Xie; Jiang-Bo Qin
Journal:  Tumour Biol       Date:  2015-06-17

3.  The methylenetetrahydrofolate reductase (MTHFR) C677T polymorphism and tumor risk: evidence from 134 case-control studies.

Authors:  Min Tang; Shang-Qian Wang; Bian-Jiang Liu; Qiang Cao; Bing-Jie Li; Peng-Chao Li; Yong-Fei Li; Chao Qin; Wei Zhang
Journal:  Mol Biol Rep       Date:  2014-04-18       Impact factor: 2.316

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.