Literature DB >> 22389051

23Na double-rotation NMR of sodium nucleotides leads to the discovery of a new dCMP hendecahydrate.

Frédéric A Perras1, Ilia Korobkov, David L Bryce.   

Abstract

Obtaining definitive information concerning the coordination environment of sodium ions which balance the negative charges found in nucleotides is a challenging task. We show that high resolution 1D and 2D (23)Na NMR spectra of sodium nucleotides obtained in the solid state with the use of double-rotation (DOR) provide valuable structural information. Sensitive spin diffusion homonuclear correlation experiments are used to establish the relative proximities of various pairs of crystallographically distinct Na sites and to assign the spectral resonances. Additionally, the DOR sidebands are simulated to obtain coordination information which is complementary to that obtained using multiple-quantum magic-angle spinning NMR spectra. These experiments led us to discover a new hendecahydrate of deoxycytidine monophosphate (dCMP), the structure of which is confirmed via single-crystal X-ray diffraction. This hydrate crystallizes reproducibly when deuterated water is used exclusively in the preparation process.

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Year:  2012        PMID: 22389051     DOI: 10.1039/c2cp40273d

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  2 in total

Review 1.  Four Ways to Oligonucleotides Without Phosphoimidazolides.

Authors:  Judit E Šponer; Jiří Šponer; Ernesto Di Mauro
Journal:  J Mol Evol       Date:  2015-10-31       Impact factor: 2.395

2.  The features of the crystal structure of the layered series hydrates of uridine-5'-monophosphate salts (UMPNa x ·yH2O).

Authors:  Pengpeng Yang; Kun Dai; Chenguang Lin; Pengfei Jiao; Fengxia Zou; Gulin Zhao; Hanjie Ying
Journal:  RSC Adv       Date:  2022-01-27       Impact factor: 3.361

  2 in total

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