Literature DB >> 22379286

Querying Event Sequences by Exact Match or Similarity Search: Design and Empirical Evaluation.

Krist Wongsuphasawat1, Catherine Plaisant, Meirav Taieb-Maimon, Ben Shneiderman.   

Abstract

Specifying event sequence queries is challenging even for skilled computer professionals familiar with SQL. Most graphical user interfaces for database search use an exact match approach, which is often effective, but near misses may also be of interest. We describe a new similarity search interface, in which users specify a query by simply placing events on a blank timeline and retrieve a similarity-ranked list of results. Behind this user interface is a new similarity measure for event sequences which the users can customize by four decision criteria, enabling them to adjust the impact of missing, extra, or swapped events or the impact of time shifts. We describe a use case with Electronic Health Records based on our ongoing collaboration with hospital physicians. A controlled experiment with 18 participants compared exact match and similarity search interfaces. We report on the advantages and disadvantages of each interface and suggest a hybrid interface combining the best of both.

Entities:  

Year:  2012        PMID: 22379286      PMCID: PMC3286623          DOI: 10.1016/j.intcom.2012.01.003

Source DB:  PubMed          Journal:  Interact Comput        ISSN: 0953-5438            Impact factor:   1.174


  9 in total

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Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
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2.  Distributed, intelligent, interactive visualization and exploration of time-oriented clinical data and their abstractions.

Authors:  Yuval Shahar; Dina Goren-Bar; David Boaz; Gil Tahan
Journal:  Artif Intell Med       Date:  2005-12-15       Impact factor: 5.326

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Journal:  Artif Intell Med       Date:  2006-07       Impact factor: 5.326

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Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2009-04       Impact factor: 6.226

5.  Temporal summaries: supporting temporal categorical searching, aggregation and comparison.

Authors:  Taowei David Wang; Catherine Plaisant; Ben Shneiderman; Neil Spring; David Roseman; Greg Marchand; Vikramjit Mukherjee; Mark Smith
Journal:  IEEE Trans Vis Comput Graph       Date:  2009 Nov-Dec       Impact factor: 4.579

6.  ActiviTree: interactive visual exploration of sequences in event-based data using graph similarity.

Authors:  Katerina Vrotsou; Jimmy Johansson; Matthew Cooper
Journal:  IEEE Trans Vis Comput Graph       Date:  2009 Nov-Dec       Impact factor: 4.579

7.  Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm.

Authors:  I Rigoutsos; A Floratos
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

8.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

9.  Intelligent visualization and exploration of time-oriented data of multiple patients.

Authors:  Denis Klimov; Yuval Shahar; Meirav Taieb-Maimon
Journal:  Artif Intell Med       Date:  2010-03-29       Impact factor: 5.326

  9 in total
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Review 2.  Facilitating biomedical researchers' interrogation of electronic health record data: Ideas from outside of biomedical informatics.

Authors:  Gregory W Hruby; Konstantina Matsoukas; James J Cimino; Chunhua Weng
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3.  Disentangling the clinical data chaos: User-centered interface system design for trauma centers.

Authors:  JaeYeon Park; Soyoung Rhim; Kyungsik Han; JeongGil Ko
Journal:  PLoS One       Date:  2021-05-12       Impact factor: 3.240

  3 in total

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