| Literature DB >> 22377351 |
Catherine Racicot Bergeron1, Catharine Prussing, Patrick Boerlin, Danielle Daignault, Lucie Dutil, Richard J Reid-Smith, George G Zhanel, Amee R Manges.
Abstract
We previously described how retail meat, particularly chicken, might be a reservoir for extraintestinal pathogenic Escherichia coli (ExPEC) causing urinary tract infections (UTIs) in humans. To rule out retail beef and pork as potential reservoirs, we tested 320 additional E. coli isolates from these meats. Isolates from beef and pork were significantly less likely than those from chicken to be genetically related to isolates from humans with UTIs. We then tested whether the reservoir for ExPEC in humans could be food animals themselves by comparing geographically and temporally matched E. coli isolates from 475 humans with UTIs and from cecal contents of 349 slaughtered animals. We found genetic similarities between E. coli from animals in abattoirs, principally chickens, and ExPEC causing UTIs in humans. ExPEC transmission from food animals could be responsible for human infections, and chickens are the most probable reservoir.Entities:
Mesh:
Year: 2012 PMID: 22377351 PMCID: PMC3309577 DOI: 10.3201/eid1803.111099
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Composition of closely related Escherichia coli clonal groups from humans and retail meat or abattoir source isolates, Canada, 2005–2007*
| Source | No. (%) isolates | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Year | Geographic area | Total | |||||||||
| 2005 | 2006 | 2007 | 2008 | QC | ON | BC/AB | SK/MB | Maritimes | |||
| UTI in humans | |||||||||||
| All | 102 (21) | 174 (37) | 137 (29) | 62 (13) | 379 (80) | 37 (8) | 23 (5) | 24 (5) | 12 (3) | 475 (100) | |
| Manges collection† | 102 (21) | 174 (37) | 75 (16) | 0 | 351 (74) | 0 | 0 | 0 | 0 | 351 (74) | |
| Zhanel collection‡ | 0 | 0 | 62 (13) | 62 (13) | 28 (6) | 37 (8) | 23 (5) | 24 (5) | 12 (3) | 124 (26) | |
| Retail meat | |||||||||||
| All | 275 (37) | 243 (33) | 219 (30) | 0 | 521 (71) | 202 (27) | 4 (1) | 10 (1) | 0 | 737 (100) | |
| Beef | 84 (11) | 72 (10) | 86 (12) | 0 | 210 (28) | 32 (4) | 0 | 0 | 0 | 242 (33) | |
| Chicken | 107 (15) | 101 (14) | 45 (6) | 0 | 141 (19) | 99 (13) | 3 (0.4) | 10 (1) | 0 | 253 (34) | |
| Pork | 84 (11) | 70 (9) | 88 (12) | 0 | 170 (23) | 71 (10) | 1 (0.1) | 0 | 0 | 242 (33) | |
| Abattoir | |||||||||||
| All | 133 (38) | 101 (29) | 115 (33) | 0 | 107 (31) | 146 (42) | 48 (14) | 30 (9) | 4 (1) | 349 (100) | |
| Beef | 18 (5) | 22 (6) | 20 (6) | 0 | 11 (3) | 23 (7) | 17 (5) | 8 (2) | 1 (0.3) | 60 (17) | |
| Chicken§ | 89 (26) | 60 (17) | 80 (23) | 0 | 75 (21) | 104 (30) | 27 (8) | 10 (3) | 2 (1) | 229 (66) | |
| Pig¶ | 26 (7) | 19 (5) | 15 (4) | 0 | 21 (6) | 19 (5) | 4 (1) | 12 (3) | 1 (0.3) | 60 (17) | |
| Total | 510 (33) | 518 (33) | 471 (30) | 62 (4) | 1,007 (65) | 385 (25) | 75 (5) | 64 (4) | 16 (1) | 1,561 (100) | |
*QC, Québec; ON, Ontario; BC, British Columbia; AB, Alberta; SK, Saskatchewan; MB, Manitoba; Maritimes, New Brunswick/Nova Scotia/Prince Edward Island; UTI, urinary tract infection. †351 E. coli isolates recovered from humans with UTIs in Montréal during June 2005–May 2007. ‡124 E. coli isolates from humans with community- or hospital-acquired UTIs from sources throughout Canada during 2007–2008. §The geographic area was unknown for 11 isolates from chicken. ¶The geographic area was unknown for 3 isolates from pigs.
Composition of closely related clonal groups containing extraintestinal pathogenic Escherichia coli from humans and retail meat or abattoir source isolates, Canada, 2005–2007*
| Clonal group/strain | Type of sample | Isolate source | Year | Location | Phylotype | ST | Serotype | Antimicrobial drug susceptibility or resistance† |
|---|---|---|---|---|---|---|---|---|
| 1 | ||||||||
| MSHS 1014A | Clinical | CA-UTI | 2007 | QC | D | 117 | O114:H4 | Susceptible |
| EC01DT05-0789-01 | Retail meat | Chicken | 2005 | ON | D | 117 | O114:H4 | Susceptible |
| EC01AB06-0065-01 | Abattoir | Chicken | 2006 | QC | D | 117 | O2:H4 | GEN, SIX, TET |
| MSHS 133 | Clinical | CA-UTI | 2005 | QC | D | 117 | O24:NM | TET |
| EC01DT07-1090-01 | Retail meat | Chicken | 2007 | QC | D | 117 | O24:H4 | GEN, SIX, TET |
| EC01DT07-1050-01 | Retail meat | Chicken | 2007 | ON | D | 117 | O45:H4 | Susceptible |
| EC01DT07-0956-01 | Retail meat | Chicken | 2007 | SK | D | 117 | O53:H4 | AMP, NAL, STR, SIX, TET, TMP/SXT |
| EC01AB07-0840-01 | Abattoir | Chicken | 2007 | ON | D | 117 | O53:NM | Susceptible |
| EC01AB07-0615-01 | Abattoir | Chicken | 2007 | ON | D | 117 | O102:H4 | AMC, AMP, FOX, TIO STR, SIX, TET |
| EC01AB05-1250-01 | Abattoir | Chicken | 2005 | ON | D | 117 | O103:H4 | AMC, AMP |
| EC01DT06-1887-01 | Retail meat | Chicken | 2006 | QC | D | 117 | O143:H4 | Susceptible |
| EC01AB06-1131-01 | Abattoir | Pig | 2006 | QC | D | 117 | O143:H4 | SIX, TET |
| EC01AB07-0695-01 | Abattoir | Chicken | 2007 | ON | D | 117 | O149:H4 | STR, SIX, TET |
| EC01DT05-1700-01 | Retail meat | Chicken | 2005 | QC | D | 117 | O160:H4 | Susceptible |
| EC01AB07-0105-01 | Abattoir | Chicken | 2007 | ON | D | 117 | O180:H4 | Susceptible |
| EC01AB07-0425-01 | Abattoir | Chicken | 2007 | BC | D | 117 | O180:H4 | KAN, STR, SIX, TET |
| EC01DT07-0827-01 | Retail meat | Pork | 2007 | ON | D | 117 | ONT:H4 | STR, SIX |
| EC01AB05-0695-01 | Abattoir | Chicken | 2005 | ON | D | 117 | ONT:H4 | GEN, SIX, |
| EC01DT05-0224-01 | Retail meat | Chicken | 2005 | ON | D | 117 | OX182:NM | Susceptible |
| 2 | ||||||||
| MSHS 624 | Clinical | CA-UTI | 2006 | QC | A | 746 | O20:H4 | Susceptible |
| EC01AB07-1301-01 | Abattoir | Pig | 2007 | ON | A | 746 | O20:NM | AMP, CHL, SIX, TET |
| EC01AB05-0990-01 | Abattoir | Chicken | 2005 | ON | A | 746 | O87:NM | AMC, AMP, FOX, TIO, CHL, STR, SIX, TET |
| EC01DT06-0006-01 | Retail meat | chicken | 2006 | QC | A | 746 | O33:NM | Susceptible |
| EC01AB05-0091-01 | Abattoir | Pig | 2005 | ON | A | 10 | Susceptible | |
| MSHS 254 | Clinical | CA-UTI | 2005 | QC | A | None | CEF, TET | |
| 48-75641 | Clinical | CA-UTI | 2007 | Maritimes | A | None | ||
| 3 | ||||||||
| EC01AB05-0765-01 | Abattoir | Chicken | 2005 | ON | A | 10 | O16:H48 | Susceptible |
| EC01AB07-0005-01 | Abattoir | Chicken | 2007 | ON | A | 10 | O16:H48 | STR, SIX, TET |
| EC01AB07-1330-01 | Abattoir | Chicken | 2007 | BC | A | 10 | O16:H48 | Susceptible |
| MSHS 233 | Clinical | CA-UTI | 2005 | QC | A | 10 | O9:H32 | AMP, TET |
| MSHS 825A | Clinical | CA-UTI | 2006 | QC | A | 10 | O15:NM | AMP, CHL, STR, SIX, TET, TMP/SXT |
| EC01DT06-1559-01 | Retail meat | Pork | 2006 | ON | A | 10 | O42:H37 | Susceptible |
| MSHS 892 | Clinical | CA-UTI | 2006 | QC | A | 10 | O101:NM | CIP, KAN, NAL, STR, TET |
| 120-79443 | Clinical | HA-UTI | 2008 | Maritimes | A | 10 | O101:H9 | |
| EC01DT05-1925-01 | Retail meat | Chicken | 2005 | QC | A | 10 | O106:H4 | Susceptible |
| EC01DT05-0408-01 | Retail meat | Chicken | 2005 | QC | A | 10 | O153:NM | AMC, AMP, FOX, TIO STR, SIX, TET, TMP/SXT |
| EC01DT07-1162-01 | Retail meat | Chicken | 2007 | ON | A | 10 | OX182:NM | AMC, AMP, FOX, TIO, TET |
| EC01DT07-0491-01 | Retail meat | Chicken | 2007 | QC | A | 10 | OX184:H4 | NAL, TET |
| EC01AB06-0855-01 | Abattoir | Chicken | 2006 | A | 548 | AMP, KAN, STR, SIX, TET | ||
| 51-77552 | Clinical | CA-UTI | 2008 | SK/MB | A | None | ||
| EC01DT06-1546-01 | Retail meat | Chicken | 2006 | QC | A | None | AMP, GEN, SIX, TET | |
| EC01AB05-0320-01 | Abattoir | Chicken | 2005 | QC | A | None | Susceptible | |
| EC01AB06-0119-01 | Abattoir | Pig | 2006 | SK | A | None | KAN, TET | |
| EC01AB06-1005-01 | Abattoir | Chicken | 2006 | ON | A | None | Susceptible | |
| EC01AB07-0566-01 | Abattoir | Pig | 2007 | SK | A | None | STR, SIX |
*ST, sequence type; MSHS, McGill University Student Health Services; CA-UTI, community-acquired urinary tract infection; QC, Québec; ON, Ontario; AB, Alberta; GEN, gentamicin; SIX, sulfisoxazole; TET, tetracycline; NM, nonmotile; SK, Saskatchewan; AMP, ampicillin; NAL, nalidixic acid; TMP/SXT, trimethoprim/sulfamethoxazole; AMC, amoxicillin/clavulanic acid; FOX, cefoxitin; TIO ceftiofur; STR, streptomycin; CEF, cephalothin; Maritimes, New Brunswick/Nova Scotia/Prince Edward Island; BC, British Columbia; ONT, did not react with O antiserum; KAN, kanamycin; CHL, chloramphenicol; CIP, ciprofloxacin; HA-UTI, hospital-acquired urinary tract infection; MB, Manitoba; blank cells indicate isolate not tested. †Resistance to specific antimicrobial drugs as indicated.