Literature DB >> 22374961

Genome sequence of Comamonas testosteroni ATCC 11996, a representative strain involved in steroid degradation.

Wenjie Gong1, Michael Kisiela, Markus B Schilhabel, Guangming Xiong, Edmund Maser.   

Abstract

Comamonas testosteroni strains belong to the family of Comamonadaceae and are known for their ability to utilize steroid compounds as carbon source. Here, we present the draft genome sequence of strain ATCC 11996, with a G+C content of 61.48%.

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Year:  2012        PMID： 22374961      PMCID： PMC3294834          DOI： 10.1128/JB.06795-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  17 in total

1.  Functional expression, purification, and characterization of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni.

Authors:  E Maser; E Möbus; G Xiong
Journal:  Biochem Biophys Res Commun       Date:  2000-06-07       Impact factor: 3.575

2.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Testosterone-regulated expression of enzymes involved in steroid and aromatic hydrocarbon catabolism in Comamonas testosteroni.

Authors:  E Möbus; M Jahn; R Schmid; D Jahn; E Maser
Journal:  J Bacteriol       Date:  1997-09       Impact factor: 3.490

5.  Regulation of the steroid-inducible 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni.

Authors:  G Xiong; E Maser
Journal:  J Biol Chem       Date:  2001-01-03       Impact factor: 5.157

6.  Cloning, expression and characterization of a novel short-chain dehydrogenase/reductase (SDRx) in Comamonas testosteroni.

Authors:  Wenjie Gong; Guangming Xiong; Edmund Maser
Journal:  J Steroid Biochem Mol Biol       Date:  2010-11-24       Impact factor: 4.292

7.  Steroid-inducible transcription of the 3beta/17beta-hydroxysteroid dehydrogenase gene (3beta/17beta-hsd) in Comamonas testosteroni.

Authors:  J E Cabrera; J L Pruneda Paz; S Genti-Raimondi
Journal:  J Steroid Biochem Mol Biol       Date:  2000-06       Impact factor: 4.292

8.  Characterization of a 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase from the gram-negative bacterium Comamonas testosteroni.

Authors:  U C Oppermann; E Maser
Journal:  Eur J Biochem       Date:  1996-11-01

9.  Identification and characterization of a novel translational repressor of the steroid-inducible 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni.

Authors:  Guangming Xiong; Hans-Jörg Martin; Edmund Maser
Journal:  J Biol Chem       Date:  2003-09-15       Impact factor: 5.157

10.  The COG database: an updated version includes eukaryotes.

Authors:  Roman L Tatusov; Natalie D Fedorova; John D Jackson; Aviva R Jacobs; Boris Kiryutin; Eugene V Koonin; Dmitri M Krylov; Raja Mazumder; Sergei L Mekhedov; Anastasia N Nikolskaya; B Sridhar Rao; Sergei Smirnov; Alexander V Sverdlov; Sona Vasudevan; Yuri I Wolf; Jodie J Yin; Darren A Natale
Journal:  BMC Bioinformatics       Date:  2003-09-11       Impact factor: 3.169
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  5 in total

1.  Identification and genome analysis of Comamonas testosteroni strain JLU460ET, a novel steroid-degrading bacterium.

Authors:  Na Liu; Yue-E Shi; Jialu Li; Meiling Zhu; Tingdi Zhang
Journal:  3 Biotech       Date:  2021-08-09       Impact factor: 2.893

2.  Novel tripartite aromatic acid transporter essential for terephthalate uptake in Comamonas sp. strain E6.

Authors:  Masaru Hosaka; Naofumi Kamimura; Shotaro Toribami; Kosuke Mori; Daisuke Kasai; Masao Fukuda; Eiji Masai
Journal:  Appl Environ Microbiol       Date:  2013-08-02       Impact factor: 4.792

3.  Permanent draft genome sequence of Comamonas testosteroni KF-1.

Authors:  Michael Weiss; Anna I Kesberg; Kurt M Labutti; Sam Pitluck; David Bruce; Loren Hauser; Alex Copeland; Tanja Woyke; Stephen Lowry; Susan Lucas; Miriam Land; Lynne Goodwin; Staffan Kjelleberg; Alasdair M Cook; Matthias Buhmann; Torsten Thomas; David Schleheck
Journal:  Stand Genomic Sci       Date:  2013-05-30

4.  Genome Sequence of Pseudomonas sp. Strain Chol1, a Model Organism for the Degradation of Bile Salts and Other Steroid Compounds.

Authors:  Johannes Holert; Intikhab Alam; Michael Larsen; André Antunes; Vladimir B Bajic; Ulrich Stingl; Bodo Philipp
Journal:  Genome Announc       Date:  2013-01-15

5.  High correlation between genotypes and phenotypes of environmental bacteria Comamonas testosteroni strains.

Authors:  Lin Liu; Wentao Zhu; Zhan Cao; Biao Xu; Gejiao Wang; Meizhong Luo
Journal:  BMC Genomics       Date:  2015-02-21       Impact factor: 3.969
  5 in total

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