Literature DB >> 22374951

Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342.

Pieter De Maayer1, Wai Yin Chan, Fabio Rezzonico, Andreas Bühlmann, Stephanus N Venter, Jochen Blom, Alexander Goesmann, Jürg E Frey, Theo H M Smits, Brion Duffy, Teresa A Coutinho.   

Abstract

The enterobacterium Pantoea ananatis is an ecologically versatile species. It has been found in the environment, as plant epiphyte and endophyte, as an emerging phytopathogen, and as a presumptive, opportunistic human pathogen. Here, we report the complete genome sequence of P. ananatis LMG 5342, isolated from a human wound.

Entities:  

Mesh：

Substances：

Year:  2012        PMID： 22374951      PMCID： PMC3294857          DOI： 10.1128/JB.06715-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Development of joint application strategies for two microbial gene finders.

Authors:  Alice C McHardy; Alexander Goesmann; Alfred Pühler; Folker Meyer
Journal:  Bioinformatics       Date:  2004-02-26       Impact factor: 6.937

3.  Pantoea clinical isolates cannot be accurately assigned to species based on metabolic profiling.

Authors:  F Rezzonico; V O Stockwell; M Tonolla; B Duffy; T H M Smits
Journal:  Transpl Infect Dis       Date:  2011-09-28       Impact factor: 2.228

4.  Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback.

Authors:  Pieter De Maayer; Wai Yin Chan; Stephanus N Venter; Ian K Toth; Paul R J Birch; Fourie Joubert; Teresa A Coutinho
Journal:  J Bacteriol       Date:  2010-03-26       Impact factor: 3.490

5.  Microbial gene identification using interpolated Markov models.

Authors:  S L Salzberg; A L Delcher; S Kasif; O White
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

6.  Bacteremic infection with Pantoea ananatis.

Authors:  Thierry De Baere; Rita Verhelst; Caroline Labit; Gerda Verschraegen; Georges Wauters; Geert Claeys; Mario Vaneechoutte
Journal:  J Clin Microbiol       Date:  2004-09       Impact factor: 5.948

7.  Clinical strains of Enterobacter agglomerans (synonyms: Erwinia herbicola, Erwinia milletiae) identified by DNA-DNA-hybridization.

Authors:  E Lind; J Ursing
Journal:  Acta Pathol Microbiol Immunol Scand B       Date:  1986-08

Review 8.  Pantoea ananatis: an unconventional plant pathogen.

Authors:  Teresa A Coutinho; Stephanus N Venter
Journal:  Mol Plant Pathol       Date:  2009-05       Impact factor: 5.663

9.  EDGAR: a software framework for the comparative analysis of prokaryotic genomes.

Authors:  Jochen Blom; Stefan P Albaum; Daniel Doppmeier; Alfred Pühler; Frank-Jörg Vorhölter; Martha Zakrzewski; Alexander Goesmann
Journal:  BMC Bioinformatics       Date:  2009-05-20       Impact factor: 3.169

10.  Genotypic comparison of Pantoea agglomerans plant and clinical strains.

Authors:  Fabio Rezzonico; Theo H M Smits; Emilio Montesinos; Jürg E Frey; Brion Duffy
Journal:  BMC Microbiol       Date:  2009-09-22       Impact factor: 3.605
View more
  20 in total

1.  The evolution of three siderophore biosynthetic clusters in environmental and host-associating strains of Pantoea.

Authors:  Craig D Soutar; John Stavrinides
Journal:  Mol Genet Genomics       Date:  2018-07-19       Impact factor: 3.291

2.  Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora.

Authors:  Fabio Rezzonico; Andrea Braun-Kiewnick; Rachel A Mann; Brendan Rodoni; Alexander Goesmann; Brion Duffy; Theo H M Smits
Journal:  Mol Plant Pathol       Date:  2012-05-15       Impact factor: 5.663

Review 3.  Detection of AI-2 receptors in genomes of Enterobacteriaceae suggests a role of type-2 quorum sensing in closed ecosystems.

Authors:  Fabio Rezzonico; Theo H M Smits; Brion Duffy
Journal:  Sensors (Basel)       Date:  2012-05-21       Impact factor: 3.576

4.  Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis.

Authors:  Pieter De Maayer; Wai-Yin Chan; Douglas A J Martin; Jochen Blom; Stephanus N Venter; Brion Duffy; Don A Cowan; Theo H M Smits; Teresa A Coutinho
Journal:  Front Microbiol       Date:  2015-06-08       Impact factor: 5.640

5.  Genome Sequence of Pantoea ananatis Strain CFH 7-1, Which Is Associated with a Vector-Borne Cotton Fruit Disease.

Authors:  Enrique G Medrano; Alois A Bell
Journal:  Genome Announc       Date:  2015-09-10

6.  The genomes of closely related Pantoea ananatis maize seed endophytes having different effects on the host plant differ in secretion system genes and mobile genetic elements.

Authors:  Raheleh Sheibani-Tezerji; Muhammad Naveed; Marc-André Jehl; Angela Sessitsch; Thomas Rattei; Birgit Mitter
Journal:  Front Microbiol       Date:  2015-05-12       Impact factor: 5.640

7.  Draft Genome Sequence of the Antibiotic-Producing Epiphytic Isolate Pantoea ananatis BRT175.

Authors:  Derek D N Smith; Morgan W B Kirzinger; John Stavrinides
Journal:  Genome Announc       Date:  2013-11-07

8.  A novel l-isoleucine-4'-dioxygenase and l-isoleucine dihydroxylation cascade in Pantoea ananatis.

Authors:  Sergey V Smirnov; Pavel M Sokolov; Veronika A Kotlyarova; Natalya N Samsonova; Tomohiro Kodera; Masakazu Sugiyama; Takayoshi Torii; Makoto Hibi; Sakayu Shimizu; Kenzo Yokozeki; Jun Ogawa
Journal:  Microbiologyopen       Date:  2013-04-02       Impact factor: 3.139

9.  The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification.

Authors:  Pieter De Maayer; Wai-Yin Chan; Jochen Blom; Stephanus N Venter; Brion Duffy; Theo H M Smits; Teresa A Coutinho
Journal:  BMC Genomics       Date:  2012-11-15       Impact factor: 3.969

10.  Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts.

Authors:  Pieter De Maayer; Wai Yin Chan; Enrico Rubagotti; Stephanus N Venter; Ian K Toth; Paul R J Birch; Teresa A Coutinho
Journal:  BMC Genomics       Date:  2014-05-27       Impact factor: 3.969
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.