Literature DB >> 22370277

HWGMWSY, an unanticipated polystyrene binding peptide from random phage display libraries.

Miha Vodnik1, Borut Strukelj, Mojca Lunder.   

Abstract

Phage display is a powerful technique for the discovery of peptide ligands that bind to various targets; however, ambiguous results often appear. Peptide HWGMWSY has been isolated repeatedly in our laboratory and by other research groups dealing with different protein and nonprotein targets, which led to a hypothesis that it may be a target-unrelated peptide interacting with polystyrene plastic surfaces. We compared binding properties and amplification rate of phage clone displaying the peptide HWGMWSY, a previously confirmed plastic binding clone WHWRLPS, and a control phage clone ASVQERK. An enzyme-linked immunosorbent assay and a phage elution assay confirmed that phage clone HWGMWSY binds to polystyrene. Surface plasmon resonance measurements on the other hand excluded the possibility of binding to bovine serum albumin, a common blocking agent in phage display experiments. Amplification rates of the above-noted phage clones were not statistically different. We therefore conclude that phage clone HWGMWSY was isolated in different selection procedures as a result of its affinity to polystyrene.
Copyright © 2012 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22370277     DOI: 10.1016/j.ab.2012.02.013

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  7 in total

1.  Identification of a RON tyrosine kinase receptor binding peptide using phage display technique and computational modeling of its binding mode.

Authors:  Omid Zarei; Silvia Benvenuti; Fulya Ustun-Alkan; Maryam Hamzeh-Mivehroud; Siavoush Dastmalchi
Journal:  J Mol Model       Date:  2017-08-19       Impact factor: 1.810

2.  Discovery of a polystyrene binding peptide isolated from phage display library and its application in peptide immobilization.

Authors:  Xu Qiang; Keyong Sun; Lijun Xing; Yifeng Xu; Hong Wang; Zhengpin Zhou; Juan Zhang; Fang Zhang; Bilgen Caliskan; Min Wang; Zheng Qiu
Journal:  Sci Rep       Date:  2017-06-01       Impact factor: 4.379

3.  SAROTUP: a suite of tools for finding potential target-unrelated peptides from phage display data.

Authors:  Bifang He; Heng Chen; Ning Li; Jian Huang
Journal:  Int J Biol Sci       Date:  2019-06-02       Impact factor: 6.580

4.  Biopanning data bank 2018: hugging next generation phage display.

Authors:  Bifang He; Lixu Jiang; Yaocong Duan; Guoshi Chai; Yewei Fang; Juanjuan Kang; Min Yu; Ning Li; Zhongjie Tang; Pengcheng Yao; Pengcheng Wu; Ratmir Derda; Jian Huang
Journal:  Database (Oxford)       Date:  2018-01-01       Impact factor: 3.451

5.  finDr: A web server for in silico D-peptide ligand identification.

Authors:  Helena Engel; Felix Guischard; Fabian Krause; Janina Nandy; Paulina Kaas; Nico Höfflin; Maja Köhn; Normann Kilb; Karsten Voigt; Steffen Wolf; Tahira Aslan; Fabian Baezner; Salomé Hahne; Carolin Ruckes; Joshua Weygant; Alisa Zinina; Emir Bora Akmeriç; Enoch B Antwi; Dennis Dombrovskij; Philipp Franke; Klara L Lesch; Niklas Vesper; Daniel Weis; Nicole Gensch; Barbara Di Ventura; Mehmet Ali Öztürk
Journal:  Synth Syst Biotechnol       Date:  2021-11-23

6.  Sensitive and specific capture of polystyrene and polypropylene microplastics using engineered peptide biosensors.

Authors:  Hyunjeong Woo; Seung Hyun Kang; Yejin Kwon; Yonghyun Choi; Jiwon Kim; Don-Hyung Ha; Masayoshi Tanaka; Mina Okochi; Jin Su Kim; Han Koo Kim; Jonghoon Choi
Journal:  RSC Adv       Date:  2022-03-08       Impact factor: 3.361

7.  BDB: biopanning data bank.

Authors:  Bifang He; Guoshi Chai; Yaocong Duan; Zhiqiang Yan; Liuyang Qiu; Huixiong Zhang; Zechun Liu; Qiang He; Ke Han; Beibei Ru; Feng-Biao Guo; Hui Ding; Hao Lin; Xianlong Wang; Nini Rao; Peng Zhou; Jian Huang
Journal:  Nucleic Acids Res       Date:  2015-10-25       Impact factor: 16.971

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.