Literature DB >> 22366531

Screens, maps & networks: from genome sequences to personalized medicine.

Thomas Sandmann1, Michael Boutros.   

Abstract

Genome sequencing of tumors provides a wealth of information on mutations and structural variations, instilling hope that this data can be used to predict individual tumor progression and response to treatment. Yet currently, our ability to predict the functional consequences of these aberrations remains poor. How do cancer-associated mutations give rise to the hallmark phenotypes of cancer? Recently, information about the genetic makeup of cancer cells has been combined with novel functional genomics approaches to identify novel targets, exploit synthetic lethality and explore the rewiring of cellular pathways. Here, we highlight recent developments revealing the hidden landscape of genetic interactions in model organisms and cancer cells, a key step toward personalized cancer diagnostics and therapy. Copyright Â
© 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22366531     DOI: 10.1016/j.gde.2012.02.001

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  8 in total

1.  Team Learning for Healthcare Quality Improvement.

Authors:  Narine Manukyan; Margaret J Eppstein; Jeffrey D Horbar
Journal:  IEEE Access       Date:  2013-08-28       Impact factor: 3.367

2.  Mapping genetic interactions in human cancer cells with RNAi and multiparametric phenotyping.

Authors:  Christina Laufer; Bernd Fischer; Maximilian Billmann; Wolfgang Huber; Michael Boutros
Journal:  Nat Methods       Date:  2013-04-07       Impact factor: 28.547

Review 3.  The genomic landscape of chronic lymphocytic leukemia: clinical implications.

Authors:  Víctor Quesada; Andrew J Ramsay; David Rodríguez; Xose S Puente; Elías Campo; Carlos López-Otín
Journal:  BMC Med       Date:  2013-05-09       Impact factor: 8.775

4.  Inferring synthetic lethal interactions from mutual exclusivity of genetic events in cancer.

Authors:  Sriganesh Srihari; Jitin Singla; Limsoon Wong; Mark A Ragan
Journal:  Biol Direct       Date:  2015-10-01       Impact factor: 4.540

Review 5.  A fine-scale dissection of the DNA double-strand break repair machinery and its implications for breast cancer therapy.

Authors:  Chao Liu; Sriganesh Srihari; Kim-Anh Lê Cao; Georgia Chenevix-Trench; Peter T Simpson; Mark A Ragan; Kum Kum Khanna
Journal:  Nucleic Acids Res       Date:  2014-05-03       Impact factor: 16.971

Review 6.  From observing to predicting single-cell structure and function with high-throughput/high-content microscopy.

Authors:  Anatole Chessel; Rafael E Carazo Salas
Journal:  Essays Biochem       Date:  2019-07-03       Impact factor: 8.000

7.  Systematic genetic interaction screens uncover cell polarity regulators and functional redundancy.

Authors:  Bruno Thomas Fievet; Josana Rodriguez; Sundar Naganathan; Christine Lee; Eva Zeiser; Takao Ishidate; Masaki Shirayama; Stephan Grill; Julie Ahringer
Journal:  Nat Cell Biol       Date:  2012-12-16       Impact factor: 28.824

Review 8.  Synthetic biology and personalized medicine.

Authors:  K K Jain
Journal:  Med Princ Pract       Date:  2012-08-16       Impact factor: 1.927

  8 in total

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