Literature DB >> 22364954

Single strand DNA catenane synthesis using the formation of G-quadruplex structure.

Yuta Sannohe1, Hiroshi Sugiyama.   

Abstract

DNA is a good material for constructing nanostructures such as DNA origami. One of the challenges in this field is constructing a topologically complex structure. Here, we synthesized a DNA catenane through the formation of a G-quadruplex structure. The formation of the DNA catenane was investigated by gel electrophoresis. Interestingly, the synthesized DNA catenane was destroyed by heat treatment. Because conventional methods to construct DNA catenane include enzymatic ligation or chemical reactions, DNA is cyclized by covalent bond connection and never destroyed by heat treatment. To our knowledge, this is the first report of the synthesis of DNA catenane without using covalent bonds. Our novel way of synthesizing DNA catenane may be of use in easily recoverable DNA topological labeling. Copyright Â
© 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22364954     DOI: 10.1016/j.bmc.2012.01.040

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  4 in total

1.  Structural optimization of pseudorotaxane-forming oligonucleotides for efficient and stable complex formation.

Authors:  Kazumitsu Onizuka; Takuya Miyashita; Tomoko Chikuni; Mamiko Ozawa; Hiroshi Abe; Fumi Nagatsugi
Journal:  Nucleic Acids Res       Date:  2018-09-28       Impact factor: 16.971

2.  Facile Characterization of Topology of DNA Catenanes.

Authors:  Lin Li; Ran An; Jiaxuan Tang; Zhe Sui; Guoqing Wang; Makoto Komiyama; Xingguo Liang
Journal:  Biophys J       Date:  2020-02-15       Impact factor: 4.033

3.  The parallel-stranded d(CGA) duplex is a highly predictable structural motif with two conformationally distinct strands.

Authors:  Emily M Luteran; Paul J Paukstelis
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-02-18       Impact factor: 7.652

4.  Daisy Chain Rotaxanes Made from Interlocked DNA Nanostructures.

Authors:  Johannes Weigandt; Chia-Ling Chung; Stefan-S Jester; Michael Famulok
Journal:  Angew Chem Int Ed Engl       Date:  2016-03-24       Impact factor: 15.336

  4 in total

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