Literature DB >> 22361578

SNARE Dance: a musical interpretation of Atg9 transport to the tubulovesicular cluster.

Rie Takahashi1, Jeffrey Miller, Daniel J Klionsky.   

Abstract

There is little doubt that humans rely on vision as their primary sensory input. However, various studies indicate that audiovisual combinations of data presentation actually enhance the ability of the learner to comprehend the information. We present an example of a musical-biological interface that provides an audible demonstration of SNARE protein function in the process of macroautophagy.

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Year:  2012        PMID： 22361578      PMCID： PMC3337839          DOI： 10.4161/auto.19327

Source DB:  PubMed          Journal:  Autophagy        ISSN： 1554-8627            Impact factor:   16.016


  12 in total

1.  A cycling protein complex required for selective autophagy.

Authors:  Julie E Legakis; Wei-Lien Yen; Daniel J Klionsky
Journal:  Autophagy       Date:  2007-03-09       Impact factor: 16.016

2.  PM--protein music.

Authors:  R D King; C G Angus
Journal:  Comput Appl Biosci       Date:  1996-06

3.  The all pervasive principle of repetitious recurrence governs not only coding sequence construction but also human endeavor in musical composition.

Authors:  S Ohno; M Ohno
Journal:  Immunogenetics       Date:  1986       Impact factor: 2.846

4.  Atg27 is required for autophagy-dependent cycling of Atg9.

Authors:  Wei-Lien Yen; Julie E Legakis; Usha Nair; Daniel J Klionsky
Journal:  Mol Biol Cell       Date:  2006-11-29       Impact factor: 4.138

5.  SNARE proteins are required for macroautophagy.

Authors:  Usha Nair; Anjali Jotwani; Jiefei Geng; Noor Gammoh; Diana Richerson; Wei-Lien Yen; Janice Griffith; Shanta Nag; Ke Wang; Tyler Moss; Misuzu Baba; James A McNew; Xuejun Jiang; Fulvio Reggiori; Thomas J Melia; Daniel J Klionsky
Journal:  Cell       Date:  2011-07-22       Impact factor: 41.582

6.  Conversion of amino-acid sequence in proteins to classical music: search for auditory patterns.

Authors:  Rie Takahashi; Jeffrey H Miller
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

7.  The Atg1-Atg13 complex regulates Atg9 and Atg23 retrieval transport from the pre-autophagosomal structure.

Authors:  Fulvio Reggiori; Katherine A Tucker; Per E Stromhaug; Daniel J Klionsky
Journal:  Dev Cell       Date:  2004-01       Impact factor: 12.270

8.  An Atg9-containing compartment that functions in the early steps of autophagosome biogenesis.

Authors:  Muriel Mari; Janice Griffith; Ester Rieter; Lakshmi Krishnappa; Daniel J Klionsky; Fulvio Reggiori
Journal:  J Cell Biol       Date:  2010-09-20       Impact factor: 10.539

9.  Apg9p/Cvt7p is an integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways.

Authors:  T Noda; J Kim; W P Huang; M Baba; C Tokunaga; Y Ohsumi; D J Klionsky
Journal:  J Cell Biol       Date:  2000-02-07       Impact factor: 10.539

10.  Recruitment of Atg9 to the preautophagosomal structure by Atg11 is essential for selective autophagy in budding yeast.

Authors:  Congcong He; Hui Song; Tomohiro Yorimitsu; Iryna Monastyrska; Wei-Lien Yen; Julie E Legakis; Daniel J Klionsky
Journal:  J Cell Biol       Date:  2006-12-18       Impact factor: 10.539
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  4 in total

1.  Found art: the yeast vacuole.

Authors:  Scott Hartley; Daniel J Klionsky
Journal:  Autophagy       Date:  2019-07-15       Impact factor: 16.016

2.  Science and Culture: Musical genes.

Authors:  John Carey
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-23       Impact factor: 11.205

3.  An auditory display tool for DNA sequence analysis.

Authors:  Mark D Temple
Journal:  BMC Bioinformatics       Date:  2017-04-24       Impact factor: 3.169

4.  Real-time audio and visual display of the Coronavirus genome.

Authors:  Mark D Temple
Journal:  BMC Bioinformatics       Date:  2020-10-02       Impact factor: 3.169
  4 in total

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