Literature DB >> 22361572

Detecting synfire chains in parallel spike data.

George L Gerstein1, Elizabeth R Williams, Markus Diesmann, Sonja Grün, Chris Trengove.   

Abstract

The synfire chain model of brain organization has received much theoretical attention since its introduction (Abeles, 1982, 1991). However there has been no convincing experimental demonstration of synfire chains due partly to limitations of recording technology but also due to lack of appropriate analytic methods for large scale recordings of parallel spike trains. We have previously published one such method based on intersection of the neural populations active at two different times (Schrader et al., 2008). In the present paper we extend this analysis to deal with higher firing rates and noise levels, and develop two additional tools based on properties of repeating firing patterns. All three measures show characteristic signatures if synfire chains underlie the recorded data. However we demonstrate that the detection of repeating firing patterns alone (as used in several papers) is not enough to infer the presence of synfire chains. Positive results from all three measures are needed.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22361572     DOI: 10.1016/j.jneumeth.2012.02.003

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  11 in total

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Authors:  Emily L Mackevicius; Andrew H Bahle; Alex H Williams; Shijie Gu; Natalia I Denisenko; Mark S Goldman; Michale S Fee
Journal:  Elife       Date:  2019-02-05       Impact factor: 8.140

Review 2.  Adaptive control of synaptic plasticity integrates micro- and macroscopic network function.

Authors:  Daniel N Scott; Michael J Frank
Journal:  Neuropsychopharmacology       Date:  2022-08-29       Impact factor: 8.294

3.  Statistical evaluation of synchronous spike patterns extracted by frequent item set mining.

Authors:  Emiliano Torre; David Picado-Muiño; Michael Denker; Christian Borgelt; Sonja Grün
Journal:  Front Comput Neurosci       Date:  2013-10-23       Impact factor: 2.380

4.  Finding neural assemblies with frequent item set mining.

Authors:  David Picado-Muiño; Christian Borgelt; Denise Berger; George Gerstein; Sonja Grün
Journal:  Front Neuroinform       Date:  2013-05-31       Impact factor: 4.081

5.  Detecting multineuronal temporal patterns in parallel spike trains.

Authors:  Kai S Gansel; Wolf Singer
Journal:  Front Neuroinform       Date:  2012-05-22       Impact factor: 4.081

Review 6.  Recent developments in VSD imaging of small neuronal networks.

Authors:  Evan S Hill; Angela M Bruno; William N Frost
Journal:  Learn Mem       Date:  2014-09-15       Impact factor: 2.460

7.  Cell assemblies at multiple time scales with arbitrary lag constellations.

Authors:  Eleonora Russo; Daniel Durstewitz
Journal:  Elife       Date:  2017-01-11       Impact factor: 8.140

8.  Methods for identification of spike patterns in massively parallel spike trains.

Authors:  Pietro Quaglio; Vahid Rostami; Emiliano Torre; Sonja Grün
Journal:  Biol Cybern       Date:  2018-04-12       Impact factor: 2.086

Review 9.  Monitoring Spiking Activity of Many Individual Neurons in Invertebrate Ganglia.

Authors:  W N Frost; C J Brandon; A M Bruno; M D Humphries; C Moore-Kochlacs; T J Sejnowski; J Wang; E S Hill
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

10.  ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains.

Authors:  Emiliano Torre; Carlos Canova; Michael Denker; George Gerstein; Moritz Helias; Sonja Grün
Journal:  PLoS Comput Biol       Date:  2016-07-15       Impact factor: 4.475

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