Literature DB >> 22360453

Cosmopolitanism of microbial eukaryotes in the global deep seas.

Simon Creer1, Frederic Sinniger.   

Abstract

Deep sea environments cover more than 65% of the earth's surface and fulfil a range of ecosystem functions, yet they are also amongst the least known habitats on earth. Whilst the discovery of key geological processes, combined with technological developments, has focused interest onto geologically active areas such as hydrothermal vents, most abyssal biodiversity remains to be discovered (Danovaro et al. 2010). However, as for terrestrial reservoirs of biodiversity, the world's largest biome is under threat from anthropogenic activities ranging from environmental change to the exploitation of minerals and rare-earth elements (Kato et al. 2011). It is therefore important to understand the magnitude, nature and composition of deep sea biological communities to inform us of levels of local adaptation, functionality and resilience with respect to future environmental perturbation. In this issue of Molecular Ecology, Bik et al. utilize 454 Roche metagenetic environmental sequencing to assess microbial metazoan community composition and phylogenetic identity across deep sea depth gradients and between ocean basins. The analyses suggest that although the majority of microbial eukaryotic taxa are regionally restricted, a small percentage might maintain cosmopolitan deep sea distributions, and an even smaller fraction appear to be eurybathic (live across depth gradients).
© 2012 Blackwell Publishing Ltd.

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Year:  2012        PMID: 22360453     DOI: 10.1111/j.1365-294X.2012.05437.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  7 in total

1.  Deep-Sea, Deep-Sequencing: Metabarcoding Extracellular DNA from Sediments of Marine Canyons.

Authors:  Magdalena Guardiola; María Jesús Uriz; Pierre Taberlet; Eric Coissac; Owen Simon Wangensteen; Xavier Turon
Journal:  PLoS One       Date:  2015-10-05       Impact factor: 3.240

2.  High-throughput sequencing and morphology perform equally well for benthic monitoring of marine ecosystems.

Authors:  Franck Lejzerowicz; Philippe Esling; Loïc Pillet; Thomas A Wilding; Kenneth D Black; Jan Pawlowski
Journal:  Sci Rep       Date:  2015-09-10       Impact factor: 4.379

3.  The use of genus-specific amplicon pyrosequencing to assess phytophthora species diversity using eDNA from soil and water in Northern Spain.

Authors:  Santiago Català; Ana Pérez-Sierra; Paloma Abad-Campos
Journal:  PLoS One       Date:  2015-03-16       Impact factor: 3.240

4.  Microorganisms-A Forum for Understanding Microbial Life in All Its Forms.

Authors:  John Fuerst
Journal:  Microorganisms       Date:  2013-02-19

5.  Ciliate diversity and distribution patterns in the sediments of a seamount and adjacent abyssal plains in the tropical Western Pacific Ocean.

Authors:  Feng Zhao; Sabine Filker; Thorsten Stoeck; Kuidong Xu
Journal:  BMC Microbiol       Date:  2017-09-12       Impact factor: 3.605

6.  Environmental factors shaping the diversity of bacterial communities that promote rice production.

Authors:  Zhaohui Wu; Qingshu Liu; Zhenyu Li; Wei Cheng; Jimin Sun; Zhaohui Guo; Yongmei Li; Jianqun Zhou; Delong Meng; Hongbo Li; Ping Lei; Huaqun Yin
Journal:  BMC Microbiol       Date:  2018-06-04       Impact factor: 3.605

7.  Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing.

Authors:  Francisco J A Nascimento; Delphine Lallias; Holly M Bik; Simon Creer
Journal:  Sci Rep       Date:  2018-08-06       Impact factor: 4.379

  7 in total

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