Literature DB >> 22355797

Transcriptional and posttranscriptional regulation of HIV-1 gene expression.

Jonathan Karn1, C Martin Stoltzfus.   

Abstract

Control of HIV-1 gene expression depends on two viral regulatory proteins, Tat and Rev. Tat stimulates transcription elongation by directing the cellular transcriptional elongation factor P-TEFb to nascent RNA polymerases. Rev is required for the transport from the nucleus to the cytoplasm of the unspliced and incompletely spliced mRNAs that encode the structural proteins of the virus. Molecular studies of both proteins have revealed how they interact with the cellular machinery to control transcription from the viral LTR and regulate the levels of spliced and unspliced mRNAs. The regulatory feedback mechanisms driven by HIV-1 Tat and Rev ensure that HIV-1 transcription proceeds through distinct phases. In cells that are not fully activated, limiting levels of Tat and Rev act as potent blocks to premature virus production.

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Year:  2012        PMID: 22355797      PMCID: PMC3281586          DOI: 10.1101/cshperspect.a006916

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Med        ISSN: 2157-1422            Impact factor:   6.915


  136 in total

1.  Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element.

Authors:  Koh Fujinaga; Dan Irwin; Yehong Huang; Ran Taube; Takeshi Kurosu; B Matija Peterlin
Journal:  Mol Cell Biol       Date:  2004-01       Impact factor: 4.272

Review 2.  HIV latency.

Authors:  Robert F Siliciano; Warner C Greene
Journal:  Cold Spring Harb Perspect Med       Date:  2011-09       Impact factor: 6.915

Review 3.  The molecular biology of HIV latency: breaking and restoring the Tat-dependent transcriptional circuit.

Authors:  Jonathan Karn
Journal:  Curr Opin HIV AIDS       Date:  2011-01       Impact factor: 4.283

4.  Crystal structure of HIV-1 Tat complexed with human P-TEFb.

Authors:  Tahir H Tahirov; Nigar D Babayeva; Katayoun Varzavand; Jeffrey J Cooper; Stanley C Sedore; David H Price
Journal:  Nature       Date:  2010-06-10       Impact factor: 49.962

5.  Structural basis for cooperative RNA binding and export complex assembly by HIV Rev.

Authors:  Matthew D Daugherty; Bella Liu; Alan D Frankel
Journal:  Nat Struct Mol Biol       Date:  2010-10-17       Impact factor: 15.369

6.  Negative and positive mRNA splicing elements act competitively to regulate human immunodeficiency virus type 1 vif gene expression.

Authors:  C M Exline; Z Feng; C M Stoltzfus
Journal:  J Virol       Date:  2008-02-13       Impact factor: 5.103

7.  Retroviral mRNA nuclear export elements regulate protein function and virion assembly.

Authors:  Chad M Swanson; Bridget A Puffer; K Muneer Ahmad; Robert W Doms; Michael H Malim
Journal:  EMBO J       Date:  2004-06-17       Impact factor: 11.598

8.  A bidirectional SF2/ASF- and SRp40-dependent splicing enhancer regulates human immunodeficiency virus type 1 rev, env, vpu, and nef gene expression.

Authors:  Massimo Caputi; Marcel Freund; Susanne Kammler; Corinna Asang; Heiner Schaal
Journal:  J Virol       Date:  2004-06       Impact factor: 5.103

9.  The mechanism of release of P-TEFb and HEXIM1 from the 7SK snRNP by viral and cellular activators includes a conformational change in 7SK.

Authors:  Brian J Krueger; Katayoun Varzavand; Jeffrey J Cooper; David H Price
Journal:  PLoS One       Date:  2010-08-23       Impact factor: 3.240

10.  Insights into the selective activation of alternatively used splice acceptors by the human immunodeficiency virus type-1 bidirectional splicing enhancer.

Authors:  Corinna Asang; Ilona Hauber; Heiner Schaal
Journal:  Nucleic Acids Res       Date:  2008-01-18       Impact factor: 16.971

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  181 in total

1.  Use of ATP analogs to inhibit HIV-1 transcription.

Authors:  Aarthi Narayanan; Gavin Sampey; Rachel Van Duyne; Irene Guendel; Kylene Kehn-Hall; Jessica Roman; Robert Currer; Hervé Galons; Nassima Oumata; Benoît Joseph; Laurent Meijer; Massimo Caputi; Sergei Nekhai; Fatah Kashanchi
Journal:  Virology       Date:  2012-07-06       Impact factor: 3.616

Review 2.  The CD8+ T Cell Noncytotoxic Antiviral Responses.

Authors:  Maelig G Morvan; Fernando C Teque; Christopher P Locher; Jay A Levy
Journal:  Microbiol Mol Biol Rev       Date:  2021-05-12       Impact factor: 11.056

3.  Natural Single-Nucleotide Variations in the HIV-1 Genomic SA1prox Region Can Alter Viral Replication Ability by Regulating Vif Expression Levels.

Authors:  Masako Nomaguchi; Naoya Doi; Yosuke Sakai; Hirotaka Ode; Yasumasa Iwatani; Takamasa Ueno; Yui Matsumoto; Yasuyuki Miyazaki; Takao Masuda; Akio Adachi
Journal:  J Virol       Date:  2016-04-14       Impact factor: 5.103

4.  APOBEC3G inhibits HIV-1 RNA elongation by inactivating the viral trans-activation response element.

Authors:  Roni Nowarski; Ponnandy Prabhu; Edan Kenig; Yoav Smith; Elena Britan-Rosich; Moshe Kotler
Journal:  J Mol Biol       Date:  2014-05-21       Impact factor: 5.469

5.  Tumor suppressor cylindromatosis (CYLD) controls HIV transcription in an NF-κB-dependent manner.

Authors:  Lara Manganaro; Lars Pache; Tobias Herrmann; John Marlett; Young Hwang; Jeffrey Murry; Lisa Miorin; Adrian T Ting; Renate König; Adolfo García-Sastre; Frederic D Bushman; Sumit K Chanda; John A T Young; Ana Fernandez-Sesma; Viviana Simon
Journal:  J Virol       Date:  2014-04-23       Impact factor: 5.103

6.  Reactivation of latent HIV: do all roads go through P-TEFb?

Authors:  Sona Budhiraja; Andrew P Rice
Journal:  Future Virol       Date:  2013-07-01       Impact factor: 1.831

7.  SRSF1 RNA Recognition Motifs Are Strong Inhibitors of HIV-1 Replication.

Authors:  Sean Paz; Michael L Lu; Hiroshi Takata; Lydie Trautmann; Massimo Caputi
Journal:  J Virol       Date:  2015-04-08       Impact factor: 5.103

8.  CBFβ enhances de novo protein biosynthesis of its binding partners HIV-1 Vif and RUNX1 and potentiates the Vif-induced degradation of APOBEC3G.

Authors:  Eri Miyagi; Sandra Kao; Venkat Yedavalli; Klaus Strebel
Journal:  J Virol       Date:  2014-02-12       Impact factor: 5.103

9.  Short communication: SAHA (vorinostat) induces CDK9 Thr-186 (T-loop) phosphorylation in resting CD4+ T cells: implications for reactivation of latent HIV.

Authors:  Rajesh Ramakrishnan; Hongbing Liu; Andrew P Rice
Journal:  AIDS Res Hum Retroviruses       Date:  2015-01       Impact factor: 2.205

10.  Probabilistic control of HIV latency and transactivation by the Tat gene circuit.

Authors:  Youfang Cao; Xue Lei; Ruy M Ribeiro; Alan S Perelson; Jie Liang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-19       Impact factor: 11.205

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