Literature DB >> 22350906

Live-cell imaging of ubiquitin-proteasome system function.

Mark S Hipp1, Kirill Bersuker, Ron R Kopito.   

Abstract

The role of the ubiquitin-proteasome system (UPS) in maintaining protein homeostasis has generated a demand for assays that quantify UPS function in the presence of chemical and protein UPS inhibitors. Here, we describe protocols that measure changes in UPS reporter levels in response to changes in the expression level, localization, or aggregation state of a second protein. We utilize cell lines stably expressing fluorescent UPS substrates that are transfected with a second protein tagged with a compatible fluorophore. We describe protocols to correlate levels of UPS substrates with changes in the levels or properties of the transfected protein.

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Year:  2012        PMID: 22350906      PMCID: PMC3711503          DOI: 10.1007/978-1-61779-474-2_33

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  17 in total

1.  Short-lived green fluorescent proteins for quantifying ubiquitin/proteasome-dependent proteolysis in living cells.

Authors:  N P Dantuma; K Lindsten; R Glas; M Jellne; M G Masucci
Journal:  Nat Biotechnol       Date:  2000-05       Impact factor: 54.908

2.  Visualization of the ER-to-cytosol dislocation reaction of a type I membrane protein.

Authors:  Edda Fiebiger; Craig Story; Hidde L Ploegh; Domenico Tortorella
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

3.  Application and analysis of the GFPu family of ubiquitin-proteasome system reporters.

Authors:  Neil F Bence; Eric J Bennett; Ron R Kopito
Journal:  Methods Enzymol       Date:  2005       Impact factor: 1.600

4.  Selective accumulation of aggregation-prone proteasome substrates in response to proteotoxic stress.

Authors:  Florian A Salomons; Victoria Menéndez-Benito; Claudia Böttcher; Brett A McCray; J Paul Taylor; Nico P Dantuma
Journal:  Mol Cell Biol       Date:  2009-01-21       Impact factor: 4.272

5.  Extended peptide-based inhibitors efficiently target the proteasome and reveal overlapping specificities of the catalytic beta-subunits.

Authors:  B M Kessler; D Tortorella; M Altun; A F Kisselev; E Fiebiger; B G Hekking; H L Ploegh; H S Overkleeft
Journal:  Chem Biol       Date:  2001-09

6.  Semi-high throughput method of measuring proteasome inhibition in vitro and in cultured cells.

Authors:  Khandan Keyomarsi; Ekem T Efuet; Tuyen N Bui
Journal:  Cell Biol Toxicol       Date:  2010-09-19       Impact factor: 6.691

7.  Central pore residues mediate the p97/VCP activity required for ERAD.

Authors:  Byron DeLaBarre; John C Christianson; Ron R Kopito; Axel T Brunger
Journal:  Mol Cell       Date:  2006-05-19       Impact factor: 17.970

8.  Single neuron ubiquitin-proteasome dynamics accompanying inclusion body formation in huntington disease.

Authors:  Siddhartha Mitra; Andrey S Tsvetkov; Steven Finkbeiner
Journal:  J Biol Chem       Date:  2008-12-10       Impact factor: 5.157

9.  Ubiquitin accumulation in autophagy-deficient mice is dependent on the Nrf2-mediated stress response pathway: a potential role for protein aggregation in autophagic substrate selection.

Authors:  Brigit E Riley; Stephen E Kaiser; Thomas A Shaler; Aylwin C Y Ng; Taichi Hara; Mark S Hipp; Kasper Lage; Ramnik J Xavier; Kwon-Yul Ryu; Keiko Taguchi; Masayuki Yamamoto; Keiji Tanaka; Noboru Mizushima; Masaaki Komatsu; Ron R Kopito
Journal:  J Cell Biol       Date:  2010-11-01       Impact factor: 10.539

10.  Impaired ubiquitin-proteasome system activity in the synapses of Huntington's disease mice.

Authors:  Jianjun Wang; Chuan-En Wang; Adam Orr; Suzanne Tydlacka; Shi-Hua Li; Xiao-Jiang Li
Journal:  J Cell Biol       Date:  2008-03-24       Impact factor: 10.539

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  3 in total

Review 1.  Recent technical developments in the study of ER-associated degradation.

Authors:  Kunio Nakatsukasa; Takumi Kamura; Jeffrey L Brodsky
Journal:  Curr Opin Cell Biol       Date:  2014-05-24       Impact factor: 8.382

2.  Stably Expressed Genes Involved in Basic Cellular Functions.

Authors:  Kejian Wang; Vikrant Vijay; James C Fuscoe
Journal:  PLoS One       Date:  2017-01-26       Impact factor: 3.240

3.  In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment.

Authors:  Qiang Guo; Carina Lehmer; Antonio Martínez-Sánchez; Till Rudack; Florian Beck; Hannelore Hartmann; Manuela Pérez-Berlanga; Frédéric Frottin; Mark S Hipp; F Ulrich Hartl; Dieter Edbauer; Wolfgang Baumeister; Rubén Fernández-Busnadiego
Journal:  Cell       Date:  2018-02-01       Impact factor: 41.582

  3 in total

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