Literature DB >> 22347692

LOH-profiling by SNP-mapping in a case of multifocal head and neck cancer.

Jens Pfeiffer1, Wolfgang Maier, Gerd J Ridder, Karim Zaoui, Ralf Birkenhäger.   

Abstract

AIM: To introduce an approach for the detection of putative genetic host factors that predispose patients to develop head and neck squamous cell carcinomas (HNSCC).
METHODS: HNSCC most often result from the accumulation of somatic gene alterations found in tumor cells. A cancer-predisposing genetic background must be expected in individuals who develop multiple cancers, starting at an unexpectedly young age or with little carcinogen exposure. Genome-wide loss of heterozygosity (LOH) profiling by single nucleotide polymorphism microarray mapping was performed in a patient with a remarkable history of multifocal HNSCC.
RESULTS: Regions of genomic deletions in germline DNA were identified on several chromosomes with a remarkable size between 1.6 Mb and 8.1 Mb (mega base-pair). No LOH was detected at the genomic location of the tumor suppressor gene P53.
CONCLUSION: Specific patterns of germline DNA deletions may be responsible for susceptibility to HNSCC and should be further analyzed.

Entities:  

Keywords:  Genome-wide analysis; Head and neck cancer; Loss of heterozygosity; Multifocal cancer; Single nucleotide polymorphism microarray; Squamous cell carcinoma

Year:  2012        PMID: 22347692      PMCID: PMC3280349          DOI: 10.5306/wjco.v3.i2.24

Source DB:  PubMed          Journal:  World J Clin Oncol        ISSN: 2218-4333


  12 in total

1.  Molecular cytogenetic analysis of head and neck squamous cell carcinoma: By comparative genomic hybridization, spectral karyotyping, and expression array analysis.

Authors:  Jeremy A Squire; Jane Bayani; Catherine Luk; Lianne Unwin; Jason Tokunaga; Christina MacMillan; Jonathan Irish; Dale Brown; Patrick Gullane; Suzanne Kamel-Reid
Journal:  Head Neck       Date:  2002-09       Impact factor: 3.147

2.  Whole genome loss of heterozygosity profiling on oral squamous cell carcinoma by high-density single nucleotide polymorphic allele (SNP) array.

Authors:  Xiaofeng Zhou; Cheng Li; Samuel C Mok; Zugen Chen; David T W Wong
Journal:  Cancer Genet Cytogenet       Date:  2004-05

Review 3.  The clinical relevance of microsatellite alterations in head and neck squamous cell carcinoma: a critical review.

Authors:  Harlinde De Schutter; Marijke Spaepen; William H Mc Bride; Sandra Nuyts
Journal:  Eur J Hum Genet       Date:  2007-05-02       Impact factor: 4.246

Review 4.  Squamous cell carcinoma of the head and neck in nonsmokers: clinical and biologic characteristics and implications for management.

Authors:  M Lingen; E M Sturgis; M S Kies
Journal:  Curr Opin Oncol       Date:  2001-05       Impact factor: 3.645

5.  Genome-wide analysis of DNA copy number changes and LOH in CLL using high-density SNP arrays.

Authors:  Dietmar Pfeifer; Milena Pantic; Ilona Skatulla; Justyna Rawluk; Clemens Kreutz; Uwe M Martens; Paul Fisch; Jens Timmer; Hendrik Veelken
Journal:  Blood       Date:  2006-10-19       Impact factor: 22.113

Review 6.  Single nucleotide polymorphism array analysis of cancer.

Authors:  Amit Dutt; Rameen Beroukhim
Journal:  Curr Opin Oncol       Date:  2007-01       Impact factor: 3.645

7.  Overexpression of p53 in squamous cell carcinoma of the tongue in young patients with no known risk factors is not associated with mutations in exons 5-9.

Authors:  M W Lingen; K W Chang; S J McMurray; D B Solt; M S Kies; B B Mittal; G K Haines; H J Pelzer
Journal:  Head Neck       Date:  2000-07       Impact factor: 3.147

8.  Identification of genes associated with tumorigenesis and metastatic potential of hypopharyngeal cancer by microarray analysis.

Authors:  Anne Cromer; Annaïck Carles; Régine Millon; Gitali Ganguli; Frédéric Chalmel; Frédéric Lemaire; Julia Young; Doulaye Dembélé; Christelle Thibault; Danièle Muller; Olivier Poch; Joseph Abecassis; Bohdan Wasylyk
Journal:  Oncogene       Date:  2004-04-01       Impact factor: 9.867

9.  Use of single nucleotide polymorphism arrays to identify a novel region of loss on chromosome 6q in squamous cell carcinomas of the oral cavity.

Authors:  Betty C Tong; Karan Dhir; Patrick K Ha; William H Westra; Blanche P Alter; David Sidransky; Wayne M Koch; Joseph A Califano
Journal:  Head Neck       Date:  2004-04       Impact factor: 3.147

10.  The role of genetic factor in etiopathogenesis of squamous cell carcinoma of the head and neck in young adults.

Authors:  Wojciech Gawecki; Magdalena Kostrzewska-Poczekaj; Marzena Gajecka; Piotr Milecki; Krzysztof Szyfter; Witold Szyfter
Journal:  Eur Arch Otorhinolaryngol       Date:  2007-07-26       Impact factor: 2.503

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