| Literature DB >> 22347123 |
Karren D Beattie, Mohan M Bhadbhade, Donald C Craig, David N Leach.
Abstract
The title compound, C(20)H(28)O(3), was isolated during our investigation into the chemical composition and pharmacological activity of Centipeda cunninghamii (DC.) A. Braun & Asch. (Asteraceae). The enanti-opure compound, a diterpene with a carbon skeleton, is composed of three six- and one five-membered rings in chair, twist-boat, half-chair and envelope conformations, respectively. Each mol-ecule makes one intra- and one inter-molecular O-H⋯O hydrogen bond in the crystal lattice, forming hydrogen-bonded chains along [010]. The absolute configuration of the compound was assigned on the basis of optical rotation measurements.Entities:
Year: 2012 PMID: 22347123 PMCID: PMC3275267 DOI: 10.1107/S1600536812002206
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H28O3 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 11 reflections |
| θ = 10–11° | |
| µ = 0.08 mm−1 | |
| β = 109.70 (2)° | Block, colourless |
| 0.30 × 0.25 × 0.10 mm | |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.0°, θmin = 2.1° |
| graphite | |
| ω–2θ scans | |
| 1586 measured reflections | |
| 1586 independent reflections | 1 standard reflections every 30 min |
| 1254 reflections with | intensity decay: none |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 1586 reflections | Δρmax = 0.15 e Å−3 |
| 218 parameters | Δρmin = −0.17 e Å−3 |
| 1 restraint | Absolute structure: deduced from optical rotation |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.3554 (4) | 0.4597 (3) | 0.9863 (3) | 0.0658 (8) | |
| O2 | 0.4220 (4) | 0.2189 (3) | 0.9850 (2) | 0.0620 (7) | |
| O3 | 0.5758 (4) | 0.1598 (3) | 0.8595 (3) | 0.0678 (9) | |
| C1 | 0.0447 (4) | 0.3543 (4) | 0.6459 (4) | 0.0521 (10) | |
| C2 | 0.1154 (5) | 0.3753 (4) | 0.7994 (4) | 0.0511 (9) | |
| C3 | 0.2956 (5) | 0.4335 (3) | 0.8438 (3) | 0.0473 (9) | |
| C4 | 0.4293 (4) | 0.3558 (3) | 0.8032 (3) | 0.0395 (8) | |
| C5 | 0.3551 (4) | 0.3369 (3) | 0.6461 (3) | 0.0359 (7) | |
| C6 | 0.4877 (5) | 0.2789 (4) | 0.5853 (3) | 0.0520 (9) | |
| C7 | 0.4047 (5) | 0.2222 (4) | 0.4458 (3) | 0.0572 (10) | |
| C8 | 0.2344 (4) | 0.2860 (4) | 0.3602 (3) | 0.0460 (8) | |
| C9 | 0.1005 (4) | 0.2857 (3) | 0.4348 (3) | 0.0435 (8) | |
| C10 | 0.1677 (4) | 0.2779 (3) | 0.5907 (3) | 0.0399 (8) | |
| C11 | −0.0703 (5) | 0.2924 (4) | 0.3625 (4) | 0.0587 (10) | |
| C12 | −0.1416 (5) | 0.3019 (4) | 0.2107 (4) | 0.0667 (12) | |
| C13 | 0.0059 (6) | 0.3158 (4) | 0.1511 (4) | 0.0609 (11) | |
| C14 | 0.1503 (6) | 0.2238 (4) | 0.2209 (4) | 0.0645 (11) | |
| C15 | 0.2579 (5) | 0.4187 (4) | 0.3156 (3) | 0.0499 (9) | |
| C16 | 0.0971 (5) | 0.4395 (4) | 0.1910 (3) | 0.0485 (9) | |
| C17 | 0.0429 (5) | 0.5449 (4) | 0.1297 (4) | 0.0567 (10) | |
| C18 | 0.4701 (4) | 0.2379 (3) | 0.8902 (3) | 0.0422 (8) | |
| C19 | 0.6049 (5) | 0.4288 (4) | 0.8399 (4) | 0.0578 (10) | |
| C20 | 0.1658 (5) | 0.1410 (4) | 0.6329 (4) | 0.0518 (9) | |
| H1A | 0.0241 | 0.4344 | 0.6009 | 0.062* | |
| H1B | −0.0679 | 0.3121 | 0.6225 | 0.062* | |
| H1O1 | 0.353 (7) | 0.381 (6) | 1.029 (6) | 0.11 (2)* | |
| H1O3 | 0.598 (6) | 0.104 (5) | 0.916 (5) | 0.070 (14)* | |
| H2A | 0.0352 | 0.4289 | 0.8251 | 0.061* | |
| H2B | 0.1212 | 0.2965 | 0.8455 | 0.061* | |
| H3A | 0.2844 | 0.5133 | 0.7966 | 0.057* | |
| H5 | 0.3378 | 0.4215 | 0.6096 | 0.043* | |
| H6A | 0.5700 | 0.3427 | 0.5799 | 0.062* | |
| H6B | 0.5545 | 0.2152 | 0.6467 | 0.062* | |
| H7A | 0.3802 | 0.1353 | 0.4561 | 0.069* | |
| H7B | 0.4886 | 0.2262 | 0.3977 | 0.069* | |
| H11 | −0.1504 | 0.2912 | 0.4089 | 0.070* | |
| H12A | −0.2197 | 0.3730 | 0.1847 | 0.080* | |
| H12B | −0.2097 | 0.2281 | 0.1736 | 0.080* | |
| H13 | −0.0373 | 0.3044 | 0.0524 | 0.073* | |
| H14A | 0.2340 | 0.2154 | 0.1732 | 0.077* | |
| H14B | 0.1024 | 0.1429 | 0.2294 | 0.077* | |
| H15A | 0.2618 | 0.4781 | 0.3863 | 0.060* | |
| H15B | 0.3652 | 0.4260 | 0.2937 | 0.060* | |
| H17A | −0.0600 | 0.5480 | 0.0549 | 0.068* | |
| H17B | 0.1071 | 0.6171 | 0.1610 | 0.068* | |
| H19A | 0.6417 | 0.4530 | 0.9336 | 0.087* | |
| H19B | 0.5881 | 0.5014 | 0.7839 | 0.087* | |
| H19C | 0.6936 | 0.3771 | 0.8250 | 0.087* | |
| H20A | 0.0491 | 0.1080 | 0.5929 | 0.078* | |
| H20B | 0.2006 | 0.1356 | 0.7300 | 0.078* | |
| H20C | 0.2464 | 0.0942 | 0.6021 | 0.078* |
| O1 | 0.094 (2) | 0.0543 (18) | 0.0541 (17) | −0.0171 (15) | 0.0310 (15) | −0.0191 (14) |
| O2 | 0.0852 (18) | 0.0558 (16) | 0.0539 (14) | 0.0077 (16) | 0.0353 (14) | 0.0151 (14) |
| O3 | 0.0799 (19) | 0.0664 (19) | 0.0635 (19) | 0.0311 (16) | 0.0324 (16) | 0.0300 (16) |
| C1 | 0.0394 (19) | 0.061 (2) | 0.054 (2) | 0.0037 (18) | 0.0125 (16) | 0.0050 (19) |
| C2 | 0.053 (2) | 0.046 (2) | 0.060 (2) | 0.0081 (18) | 0.0275 (18) | −0.0023 (18) |
| C3 | 0.067 (2) | 0.0321 (18) | 0.047 (2) | −0.0034 (17) | 0.0240 (17) | −0.0033 (16) |
| C4 | 0.0405 (18) | 0.0345 (18) | 0.0401 (18) | −0.0065 (15) | 0.0094 (14) | −0.0001 (15) |
| C5 | 0.0370 (16) | 0.0337 (16) | 0.0352 (16) | 0.0009 (14) | 0.0100 (13) | 0.0038 (14) |
| C6 | 0.0451 (18) | 0.066 (2) | 0.0468 (19) | 0.0127 (19) | 0.0179 (16) | 0.0072 (19) |
| C7 | 0.070 (2) | 0.056 (2) | 0.052 (2) | 0.020 (2) | 0.0293 (18) | 0.008 (2) |
| C8 | 0.055 (2) | 0.0439 (19) | 0.0368 (17) | 0.0057 (18) | 0.0120 (15) | 0.0002 (16) |
| C9 | 0.053 (2) | 0.0355 (16) | 0.0396 (17) | −0.0086 (17) | 0.0127 (15) | −0.0014 (15) |
| C10 | 0.0408 (18) | 0.0368 (18) | 0.0406 (18) | −0.0055 (16) | 0.0119 (15) | −0.0012 (15) |
| C11 | 0.052 (2) | 0.065 (2) | 0.051 (2) | −0.020 (2) | 0.0080 (18) | 0.004 (2) |
| C12 | 0.063 (2) | 0.070 (3) | 0.048 (2) | −0.025 (2) | −0.0063 (19) | 0.004 (2) |
| C13 | 0.085 (3) | 0.054 (3) | 0.0337 (18) | 0.001 (2) | 0.0073 (19) | −0.0051 (16) |
| C14 | 0.095 (3) | 0.047 (2) | 0.047 (2) | 0.007 (2) | 0.019 (2) | −0.0020 (19) |
| C15 | 0.052 (2) | 0.055 (2) | 0.0442 (19) | −0.0005 (18) | 0.0193 (16) | 0.0042 (18) |
| C16 | 0.059 (2) | 0.049 (2) | 0.0421 (19) | 0.0009 (18) | 0.0233 (16) | 0.0043 (17) |
| C17 | 0.049 (2) | 0.058 (2) | 0.065 (2) | 0.0036 (19) | 0.0203 (17) | 0.009 (2) |
| C18 | 0.0398 (17) | 0.0418 (18) | 0.0397 (17) | −0.0048 (16) | 0.0061 (15) | −0.0008 (16) |
| C19 | 0.052 (2) | 0.057 (2) | 0.058 (2) | −0.017 (2) | 0.0090 (18) | 0.0025 (19) |
| C20 | 0.064 (2) | 0.042 (2) | 0.046 (2) | −0.0102 (18) | 0.0138 (17) | −0.0012 (17) |
| O1—C3 | 1.432 (4) | C8—C15 | 1.536 (5) |
| O1—H1O1 | 0.96 (7) | C8—C14 | 1.538 (5) |
| O2—C18 | 1.198 (4) | C9—C11 | 1.331 (5) |
| O3—C18 | 1.312 (4) | C9—C10 | 1.537 (4) |
| O3—H1O3 | 0.82 (5) | C10—C20 | 1.541 (5) |
| C1—C2 | 1.529 (5) | C11—C12 | 1.499 (5) |
| C1—C10 | 1.544 (5) | C11—H11 | 0.9300 |
| C1—H1A | 0.9700 | C12—C13 | 1.525 (6) |
| C1—H1B | 0.9700 | C12—H12A | 0.9700 |
| C2—C3 | 1.505 (5) | C12—H12B | 0.9700 |
| C2—H2A | 0.9700 | C13—C16 | 1.511 (6) |
| C2—H2B | 0.9700 | C13—C14 | 1.516 (6) |
| C3—C4 | 1.534 (5) | C13—H13 | 0.9800 |
| C3—H3A | 0.9800 | C14—H14A | 0.9700 |
| C4—C18 | 1.532 (5) | C14—H14B | 0.9700 |
| C4—C19 | 1.551 (5) | C15—C16 | 1.514 (5) |
| C4—C5 | 1.562 (4) | C15—H15A | 0.9700 |
| C5—C6 | 1.549 (5) | C15—H15B | 0.9700 |
| C5—C10 | 1.559 (4) | C16—C17 | 1.305 (6) |
| C5—H5 | 0.9800 | C17—H17A | 0.9300 |
| C6—C7 | 1.514 (5) | C17—H17B | 0.9300 |
| C6—H6A | 0.9700 | C19—H19A | 0.9600 |
| C6—H6B | 0.9700 | C19—H19B | 0.9600 |
| C7—C8 | 1.527 (5) | C19—H19C | 0.9600 |
| C7—H7A | 0.9700 | C20—H20A | 0.9600 |
| C7—H7B | 0.9700 | C20—H20B | 0.9600 |
| C8—C9 | 1.531 (5) | C20—H20C | 0.9600 |
| C3—O1—H1O1 | 105 (4) | C9—C10—C1 | 109.0 (3) |
| C18—O3—H1O3 | 107 (3) | C20—C10—C1 | 109.5 (3) |
| C2—C1—C10 | 114.4 (3) | C9—C10—C5 | 108.8 (2) |
| C2—C1—H1A | 108.7 | C20—C10—C5 | 112.7 (3) |
| C10—C1—H1A | 108.7 | C1—C10—C5 | 107.9 (3) |
| C2—C1—H1B | 108.7 | C9—C11—C12 | 124.1 (4) |
| C10—C1—H1B | 108.7 | C9—C11—H11 | 118.0 |
| H1A—C1—H1B | 107.6 | C12—C11—H11 | 118.0 |
| C3—C2—C1 | 111.4 (3) | C11—C12—C13 | 111.5 (3) |
| C3—C2—H2A | 109.3 | C11—C12—H12A | 109.3 |
| C1—C2—H2A | 109.3 | C13—C12—H12A | 109.3 |
| C3—C2—H2B | 109.3 | C11—C12—H12B | 109.3 |
| C1—C2—H2B | 109.3 | C13—C12—H12B | 109.3 |
| H2A—C2—H2B | 108.0 | H12A—C12—H12B | 108.0 |
| O1—C3—C2 | 110.8 (3) | C16—C13—C14 | 102.7 (3) |
| O1—C3—C4 | 112.0 (3) | C16—C13—C12 | 110.4 (3) |
| C2—C3—C4 | 112.5 (3) | C14—C13—C12 | 108.5 (3) |
| O1—C3—H3A | 107.1 | C16—C13—H13 | 111.6 |
| C2—C3—H3A | 107.1 | C14—C13—H13 | 111.6 |
| C4—C3—H3A | 107.1 | C12—C13—H13 | 111.6 |
| C18—C4—C3 | 108.6 (3) | C13—C14—C8 | 101.2 (3) |
| C18—C4—C19 | 106.2 (3) | C13—C14—H14A | 111.5 |
| C3—C4—C19 | 108.8 (3) | C8—C14—H14A | 111.5 |
| C18—C4—C5 | 116.5 (3) | C13—C14—H14B | 111.5 |
| C3—C4—C5 | 107.9 (3) | C8—C14—H14B | 111.5 |
| C19—C4—C5 | 108.7 (3) | H14A—C14—H14B | 109.4 |
| C6—C5—C10 | 113.6 (3) | C16—C15—C8 | 104.0 (3) |
| C6—C5—C4 | 114.4 (3) | C16—C15—H15A | 111.0 |
| C10—C5—C4 | 115.1 (2) | C8—C15—H15A | 111.0 |
| C6—C5—H5 | 104.0 | C16—C15—H15B | 111.0 |
| C10—C5—H5 | 104.0 | C8—C15—H15B | 111.0 |
| C4—C5—H5 | 104.0 | H15A—C15—H15B | 109.0 |
| C7—C6—C5 | 114.6 (3) | C17—C16—C13 | 125.5 (3) |
| C7—C6—H6A | 108.6 | C17—C16—C15 | 126.8 (4) |
| C5—C6—H6A | 108.6 | C13—C16—C15 | 107.7 (3) |
| C7—C6—H6B | 108.6 | C16—C17—H17A | 120.0 |
| C5—C6—H6B | 108.6 | C16—C17—H17B | 120.0 |
| H6A—C6—H6B | 107.6 | H17A—C17—H17B | 120.0 |
| C6—C7—C8 | 113.7 (3) | O2—C18—O3 | 120.7 (3) |
| C6—C7—H7A | 108.8 | O2—C18—C4 | 124.7 (3) |
| C8—C7—H7A | 108.8 | O3—C18—C4 | 114.4 (3) |
| C6—C7—H7B | 108.8 | C4—C19—H19A | 109.5 |
| C8—C7—H7B | 108.8 | C4—C19—H19B | 109.5 |
| H7A—C7—H7B | 107.7 | H19A—C19—H19B | 109.5 |
| C7—C8—C9 | 110.5 (3) | C4—C19—H19C | 109.5 |
| C7—C8—C15 | 114.8 (3) | H19A—C19—H19C | 109.5 |
| C9—C8—C15 | 109.7 (3) | H19B—C19—H19C | 109.5 |
| C7—C8—C14 | 112.5 (3) | C10—C20—H20A | 109.5 |
| C9—C8—C14 | 108.7 (3) | C10—C20—H20B | 109.5 |
| C15—C8—C14 | 100.2 (3) | H20A—C20—H20B | 109.5 |
| C11—C9—C8 | 118.8 (3) | C10—C20—H20C | 109.5 |
| C11—C9—C10 | 122.3 (3) | H20A—C20—H20C | 109.5 |
| C8—C9—C10 | 118.9 (3) | H20B—C20—H20C | 109.5 |
| C9—C10—C20 | 108.8 (3) | ||
| C10—C1—C2—C3 | 54.8 (4) | C2—C1—C10—C20 | 72.3 (4) |
| C1—C2—C3—O1 | 176.4 (3) | C2—C1—C10—C5 | −50.7 (4) |
| C1—C2—C3—C4 | −57.4 (4) | C6—C5—C10—C9 | −55.0 (4) |
| O1—C3—C4—C18 | 55.0 (3) | C4—C5—C10—C9 | 170.5 (3) |
| C2—C3—C4—C18 | −70.5 (3) | C6—C5—C10—C20 | 65.7 (4) |
| O1—C3—C4—C19 | −60.1 (4) | C4—C5—C10—C20 | −68.7 (3) |
| C2—C3—C4—C19 | 174.4 (3) | C6—C5—C10—C1 | −173.2 (3) |
| O1—C3—C4—C5 | −177.9 (3) | C4—C5—C10—C1 | 52.3 (4) |
| C2—C3—C4—C5 | 56.6 (3) | C8—C9—C11—C12 | −0.8 (6) |
| C18—C4—C5—C6 | −67.3 (4) | C10—C9—C11—C12 | 179.1 (4) |
| C3—C4—C5—C6 | 170.3 (3) | C9—C11—C12—C13 | −5.6 (6) |
| C19—C4—C5—C6 | 52.5 (4) | C11—C12—C13—C16 | −67.3 (5) |
| C18—C4—C5—C10 | 66.8 (4) | C11—C12—C13—C14 | 44.5 (5) |
| C3—C4—C5—C10 | −55.6 (3) | C16—C13—C14—C8 | 42.4 (4) |
| C19—C4—C5—C10 | −173.4 (3) | C12—C13—C14—C8 | −74.4 (4) |
| C10—C5—C6—C7 | 26.2 (5) | C7—C8—C14—C13 | −171.1 (3) |
| C4—C5—C6—C7 | 161.1 (3) | C9—C8—C14—C13 | 66.3 (4) |
| C5—C6—C7—C8 | 30.5 (5) | C15—C8—C14—C13 | −48.7 (4) |
| C6—C7—C8—C9 | −56.6 (4) | C7—C8—C15—C16 | 156.9 (3) |
| C6—C7—C8—C15 | 68.0 (4) | C9—C8—C15—C16 | −78.1 (3) |
| C6—C7—C8—C14 | −178.2 (3) | C14—C8—C15—C16 | 36.2 (3) |
| C7—C8—C9—C11 | −154.9 (4) | C14—C13—C16—C17 | 161.6 (4) |
| C15—C8—C9—C11 | 77.6 (4) | C12—C13—C16—C17 | −82.9 (5) |
| C14—C8—C9—C11 | −31.1 (5) | C14—C13—C16—C15 | −19.9 (4) |
| C7—C8—C9—C10 | 25.3 (4) | C12—C13—C16—C15 | 95.6 (4) |
| C15—C8—C9—C10 | −102.2 (3) | C8—C15—C16—C17 | 167.9 (3) |
| C14—C8—C9—C10 | 149.1 (3) | C8—C15—C16—C13 | −10.5 (4) |
| C11—C9—C10—C20 | 85.3 (5) | C3—C4—C18—O2 | −8.6 (4) |
| C8—C9—C10—C20 | −94.8 (4) | C19—C4—C18—O2 | 108.2 (4) |
| C11—C9—C10—C1 | −34.0 (5) | C5—C4—C18—O2 | −130.6 (4) |
| C8—C9—C10—C1 | 145.8 (3) | C3—C4—C18—O3 | 176.3 (3) |
| C11—C9—C10—C5 | −151.5 (4) | C19—C4—C18—O3 | −66.9 (4) |
| C8—C9—C10—C5 | 28.3 (4) | C5—C4—C18—O3 | 54.3 (4) |
| C2—C1—C10—C9 | −168.8 (3) |
| H··· | ||||
| O3—H1O3···O1i | 0.82 (5) | 1.83 (5) | 2.637 (4) | 169 (5) |
| O1—H1O1···O2 | 0.96 (7) | 1.94 (6) | 2.651 (4) | 129 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H1 | 0.82 (5) | 1.83 (5) | 2.637 (4) | 169 (5) |
| O1—H1 | 0.96 (7) | 1.94 (6) | 2.651 (4) | 129 (5) |
Symmetry code: (i) .