Literature DB >> 22347084

3-(4-Bromo-phenyl-sulfon-yl)-5-cyclo-hexyl-2-methyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C(21)H(21)BrO(3)S, the cyclo-hexyl ring adopts a chair conformation. The 4-bromo-phenyl ring makes a dihedral angle of 80.88 (6)° with the mean plane of the benzofuran fragment. An intra-molecular C-H⋯O hydrogen bond is formed between an O atom of the sulfonyl group and one H atom of the aromatic ring such that a five-membered ring is formed. The crystal packing is stabilized by an inter-molecular C-H⋯O hydrogen bond, which links the mol-ecules into chains with graph-set notation C(6) running parallel to the c axis, and π-π stacking inter-actions [centroid-centroid distance = 3.6129 (12) Å].

Entities:  

Year:  2012        PMID: 22347084      PMCID: PMC3275228          DOI: 10.1107/S1600536812001791

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzofuran compounds, see: Aslam et al. (2009 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For the crystal structures of related compounds, see: Choi et al. (2011 ▶); Seo et al. (2011 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C21H21BrO3S M = 433.35 Monoclinic, a = 16.8264 (3) Å b = 8.7627 (1) Å c = 13.3545 (2) Å β = 104.248 (1)° V = 1908.48 (5) Å3 Z = 4 Mo Kα radiation μ = 2.28 mm−1 T = 173 K 0.31 × 0.19 × 0.18 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.543, T max = 0.686 18100 measured reflections 4739 independent reflections 3566 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.103 S = 1.03 4739 reflections 236 parameters H-atom parameters constrained Δρmax = 0.60 e Å−3 Δρmin = −0.71 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek,2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812001791/bx2395sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812001791/bx2395Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812001791/bx2395Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H21BrO3SF(000) = 888
Mr = 433.35Dx = 1.508 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5934 reflections
a = 16.8264 (3) Åθ = 2.6–27.2°
b = 8.7627 (1) ŵ = 2.28 mm1
c = 13.3545 (2) ÅT = 173 K
β = 104.248 (1)°Block, colourless
V = 1908.48 (5) Å30.31 × 0.19 × 0.18 mm
Z = 4
Bruker SMART APEXII CCD diffractometer4739 independent reflections
Radiation source: rotating anode3566 reflections with I > 2σ(I)
graphite multilayerRint = 0.031
Detector resolution: 10.0 pixels mm-1θmax = 28.3°, θmin = 1.3°
φ and ω scansh = −18→22
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −11→7
Tmin = 0.543, Tmax = 0.686l = −17→17
18100 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: difference Fourier map
wR(F2) = 0.103H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0533P)2 + 0.5992P] where P = (Fo2 + 2Fc2)/3
4739 reflections(Δ/σ)max = 0.001
236 parametersΔρmax = 0.60 e Å3
0 restraintsΔρmin = −0.71 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.472627 (17)0.39062 (4)0.30549 (2)0.05789 (12)
S10.15069 (3)0.28324 (5)0.47083 (4)0.02514 (12)
O10.04011 (9)0.67903 (17)0.41683 (12)0.0338 (4)
O20.09589 (10)0.18906 (17)0.39712 (12)0.0352 (4)
O30.17627 (9)0.23523 (16)0.57671 (11)0.0311 (3)
C10.11029 (12)0.4652 (2)0.46944 (15)0.0250 (4)
C20.13778 (12)0.5779 (2)0.54926 (16)0.0250 (4)
C30.19440 (13)0.5830 (2)0.64531 (17)0.0263 (4)
H30.22560.49510.67200.032*
C40.20449 (12)0.7184 (2)0.70136 (17)0.0288 (5)
C50.15718 (14)0.8459 (2)0.6599 (2)0.0368 (5)
H50.16440.93810.69850.044*
C60.10060 (14)0.8430 (2)0.5654 (2)0.0378 (5)
H60.06910.93040.53850.045*
C70.09228 (13)0.7077 (2)0.51260 (17)0.0302 (5)
C80.05259 (12)0.5303 (2)0.39189 (17)0.0299 (5)
C90.26505 (13)0.7263 (2)0.80598 (17)0.0308 (5)
H90.26460.83330.83200.037*
C100.35212 (14)0.6904 (3)0.79958 (18)0.0404 (6)
H10A0.36930.76540.75360.049*
H10B0.35340.58780.76900.049*
C110.41288 (16)0.6951 (3)0.9066 (2)0.0471 (6)
H11A0.46800.66480.89980.057*
H11B0.41660.80080.93350.057*
C120.38692 (19)0.5901 (3)0.9823 (2)0.0506 (7)
H12A0.42520.60131.05120.061*
H12B0.38950.48300.95970.061*
C130.30039 (19)0.6264 (4)0.9898 (2)0.0544 (7)
H13A0.29940.72931.02000.065*
H13B0.28350.55191.03620.065*
C140.23995 (16)0.6211 (3)0.88381 (19)0.0438 (6)
H14A0.18490.65110.89100.053*
H14B0.23630.51510.85740.053*
C150.00326 (14)0.4780 (3)0.29081 (17)0.0382 (5)
H15A0.01700.37170.27980.057*
H15B0.01510.54210.23610.057*
H15C−0.05510.48550.28940.057*
C160.24026 (13)0.3119 (2)0.42616 (15)0.0249 (4)
C170.23543 (13)0.3041 (2)0.32088 (15)0.0282 (4)
H170.18460.28150.27370.034*
C180.30421 (15)0.3291 (3)0.28488 (17)0.0338 (5)
H180.30120.32530.21300.041*
C190.37760 (14)0.3597 (3)0.35501 (19)0.0336 (5)
C200.38350 (14)0.3691 (3)0.45991 (18)0.0355 (5)
H200.43460.39130.50670.043*
C210.31415 (13)0.3457 (3)0.49569 (16)0.0305 (5)
H210.31700.35270.56750.037*
U11U22U33U12U13U23
Br10.03863 (18)0.0885 (3)0.0517 (2)0.00045 (13)0.02099 (14)−0.00445 (14)
S10.0269 (3)0.0250 (2)0.0201 (2)−0.0028 (2)−0.0007 (2)0.00023 (19)
O10.0247 (8)0.0351 (8)0.0382 (9)0.0053 (6)0.0014 (7)0.0107 (7)
O20.0351 (9)0.0351 (8)0.0300 (8)−0.0102 (7)−0.0024 (7)−0.0058 (7)
O30.0376 (8)0.0300 (7)0.0230 (8)−0.0007 (6)0.0019 (7)0.0045 (6)
C10.0236 (10)0.0275 (10)0.0227 (10)0.0008 (8)0.0034 (8)0.0042 (8)
C20.0218 (10)0.0235 (9)0.0308 (11)0.0016 (7)0.0087 (9)0.0036 (8)
C30.0246 (11)0.0238 (9)0.0296 (11)0.0018 (8)0.0049 (9)0.0003 (8)
C40.0234 (10)0.0266 (10)0.0379 (12)−0.0027 (8)0.0105 (9)−0.0040 (9)
C50.0319 (12)0.0247 (10)0.0546 (15)0.0010 (9)0.0123 (12)−0.0066 (10)
C60.0288 (12)0.0266 (11)0.0576 (16)0.0083 (9)0.0096 (12)0.0052 (11)
C70.0211 (10)0.0313 (11)0.0377 (12)0.0027 (8)0.0065 (9)0.0084 (9)
C80.0223 (10)0.0365 (11)0.0307 (11)0.0000 (9)0.0063 (9)0.0084 (9)
C90.0303 (11)0.0265 (10)0.0347 (12)−0.0040 (9)0.0064 (10)−0.0096 (9)
C100.0258 (12)0.0608 (16)0.0346 (13)−0.0044 (11)0.0075 (10)−0.0037 (11)
C110.0308 (13)0.0652 (18)0.0415 (15)−0.0023 (12)0.0018 (11)−0.0119 (13)
C120.0581 (18)0.0480 (15)0.0381 (15)0.0051 (13)−0.0026 (13)−0.0055 (12)
C130.064 (2)0.0674 (18)0.0335 (14)−0.0088 (15)0.0159 (14)−0.0057 (12)
C140.0414 (14)0.0578 (16)0.0359 (14)−0.0108 (11)0.0168 (12)−0.0085 (11)
C150.0276 (11)0.0559 (15)0.0262 (11)−0.0029 (11)−0.0026 (9)0.0109 (11)
C160.0267 (10)0.0228 (9)0.0228 (10)0.0016 (8)0.0013 (8)−0.0004 (8)
C170.0287 (11)0.0316 (11)0.0191 (10)0.0009 (9)−0.0041 (9)−0.0041 (8)
C180.0415 (13)0.0364 (11)0.0228 (11)0.0034 (10)0.0064 (10)−0.0033 (9)
C190.0289 (12)0.0365 (11)0.0363 (13)0.0022 (9)0.0095 (10)−0.0014 (10)
C200.0270 (12)0.0450 (13)0.0300 (12)0.0003 (10)−0.0018 (10)−0.0028 (10)
C210.0314 (12)0.0366 (11)0.0195 (10)0.0009 (9)−0.0015 (9)−0.0001 (9)
Br1—C191.894 (2)C10—H10B0.9900
S1—O21.4330 (15)C11—C121.509 (4)
S1—O31.4360 (15)C11—H11A0.9900
S1—C11.731 (2)C11—H11B0.9900
S1—C161.770 (2)C12—C131.517 (4)
O1—C81.374 (3)C12—H12A0.9900
O1—C71.385 (3)C12—H12B0.9900
C1—C81.359 (3)C13—C141.526 (4)
C1—C21.444 (3)C13—H13A0.9900
C2—C71.391 (3)C13—H13B0.9900
C2—C31.398 (3)C14—H14A0.9900
C3—C41.391 (3)C14—H14B0.9900
C3—H30.9500C15—H15A0.9800
C4—C51.405 (3)C15—H15B0.9800
C4—C91.515 (3)C15—H15C0.9800
C5—C61.381 (3)C16—C211.388 (3)
C5—H50.9500C16—C171.390 (3)
C6—C71.369 (3)C17—C181.376 (3)
C6—H60.9500C17—H170.9500
C8—C151.473 (3)C18—C191.380 (3)
C9—C101.521 (3)C18—H180.9500
C9—C141.525 (3)C19—C201.382 (3)
C9—H91.0000C20—C211.381 (3)
C10—C111.540 (3)C20—H200.9500
C10—H10A0.9900C21—H210.9500
O2—S1—O3119.59 (9)C12—C11—H11B109.3
O2—S1—C1109.78 (10)C10—C11—H11B109.3
O3—S1—C1107.58 (9)H11A—C11—H11B107.9
O2—S1—C16107.91 (10)C11—C12—C13110.9 (2)
O3—S1—C16107.43 (9)C11—C12—H12A109.5
C1—S1—C16103.33 (9)C13—C12—H12A109.5
C8—O1—C7107.22 (15)C11—C12—H12B109.5
C8—C1—C2108.29 (18)C13—C12—H12B109.5
C8—C1—S1126.89 (17)H12A—C12—H12B108.0
C2—C1—S1124.67 (15)C12—C13—C14111.3 (2)
C7—C2—C3119.29 (19)C12—C13—H13A109.4
C7—C2—C1104.56 (18)C14—C13—H13A109.4
C3—C2—C1136.16 (18)C12—C13—H13B109.4
C4—C3—C2119.09 (19)C14—C13—H13B109.4
C4—C3—H3120.5H13A—C13—H13B108.0
C2—C3—H3120.5C13—C14—C9112.3 (2)
C3—C4—C5119.0 (2)C13—C14—H14A109.1
C3—C4—C9120.07 (18)C9—C14—H14A109.1
C5—C4—C9120.93 (19)C13—C14—H14B109.1
C6—C5—C4122.8 (2)C9—C14—H14B109.1
C6—C5—H5118.6H14A—C14—H14B107.9
C4—C5—H5118.6C8—C15—H15A109.5
C7—C6—C5116.5 (2)C8—C15—H15B109.5
C7—C6—H6121.7H15A—C15—H15B109.5
C5—C6—H6121.7C8—C15—H15C109.5
C6—C7—O1126.46 (19)H15A—C15—H15C109.5
C6—C7—C2123.3 (2)H15B—C15—H15C109.5
O1—C7—C2110.23 (18)C21—C16—C17120.5 (2)
C1—C8—O1109.70 (18)C21—C16—S1120.10 (16)
C1—C8—C15134.7 (2)C17—C16—S1119.43 (16)
O1—C8—C15115.61 (18)C18—C17—C16120.06 (19)
C4—C9—C10112.16 (18)C18—C17—H17120.0
C4—C9—C14111.38 (18)C16—C17—H17120.0
C10—C9—C14110.2 (2)C17—C18—C19118.9 (2)
C4—C9—H9107.6C17—C18—H18120.6
C10—C9—H9107.6C19—C18—H18120.6
C14—C9—H9107.6C18—C19—C20121.9 (2)
C9—C10—C11111.8 (2)C18—C19—Br1118.82 (18)
C9—C10—H10A109.3C20—C19—Br1119.28 (18)
C11—C10—H10A109.3C21—C20—C19119.1 (2)
C9—C10—H10B109.3C21—C20—H20120.5
C11—C10—H10B109.3C19—C20—H20120.5
H10A—C10—H10B107.9C20—C21—C16119.6 (2)
C12—C11—C10111.7 (2)C20—C21—H21120.2
C12—C11—H11A109.3C16—C21—H21120.2
C10—C11—H11A109.3
O2—S1—C1—C8−21.0 (2)C7—O1—C8—C15−178.98 (18)
O3—S1—C1—C8−152.62 (18)C3—C4—C9—C1059.7 (3)
C16—S1—C1—C893.9 (2)C5—C4—C9—C10−121.0 (2)
O2—S1—C1—C2164.01 (17)C3—C4—C9—C14−64.3 (3)
O3—S1—C1—C232.4 (2)C5—C4—C9—C14115.0 (2)
C16—S1—C1—C2−81.09 (18)C4—C9—C10—C11−178.6 (2)
C8—C1—C2—C70.4 (2)C14—C9—C10—C11−53.9 (3)
S1—C1—C2—C7176.20 (16)C9—C10—C11—C1255.4 (3)
C8—C1—C2—C3−179.7 (2)C10—C11—C12—C13−55.3 (3)
S1—C1—C2—C3−3.9 (4)C11—C12—C13—C1455.3 (3)
C7—C2—C3—C4−0.7 (3)C12—C13—C14—C9−55.6 (3)
C1—C2—C3—C4179.4 (2)C4—C9—C14—C13179.6 (2)
C2—C3—C4—C50.3 (3)C10—C9—C14—C1354.5 (3)
C2—C3—C4—C9179.58 (18)O2—S1—C16—C21−155.16 (16)
C3—C4—C5—C60.1 (3)O3—S1—C16—C21−24.96 (19)
C9—C4—C5—C6−179.2 (2)C1—S1—C16—C2188.60 (18)
C4—C5—C6—C70.0 (4)O2—S1—C16—C1726.52 (19)
C5—C6—C7—O1−179.5 (2)O3—S1—C16—C17156.72 (16)
C5—C6—C7—C2−0.5 (3)C1—S1—C16—C17−89.71 (17)
C8—O1—C7—C6178.8 (2)C21—C16—C17—C180.4 (3)
C8—O1—C7—C2−0.3 (2)S1—C16—C17—C18178.71 (16)
C3—C2—C7—C60.9 (3)C16—C17—C18—C190.8 (3)
C1—C2—C7—C6−179.2 (2)C17—C18—C19—C20−1.4 (3)
C3—C2—C7—O1−179.99 (18)C17—C18—C19—Br1178.92 (16)
C1—C2—C7—O1−0.1 (2)C18—C19—C20—C210.6 (3)
C2—C1—C8—O1−0.6 (2)Br1—C19—C20—C21−179.67 (17)
S1—C1—C8—O1−176.28 (15)C19—C20—C21—C160.6 (3)
C2—C1—C8—C15178.8 (2)C17—C16—C21—C20−1.2 (3)
S1—C1—C8—C153.1 (4)S1—C16—C21—C20−179.45 (17)
C7—O1—C8—C10.5 (2)
D—H···AD—HH···AD···AD—H···A
C15—H15A···O20.982.403.125 (3)131
C18—H18···O3i0.952.483.120 (3)125
Ring 1Ring 2φdΔ
O1/C7/C2/C1/C8(O1/C7/C2/C1/C8)ii0.03.6129 (12)0.938
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15A⋯O20.982.403.125 (3)131
C18—H18⋯O3i0.952.483.120 (3)125

Symmetry code: (i) .

  9 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

6.  Antibacterial and antifungal activity of cicerfuran and related 2-arylbenzofurans and stilbenes.

Authors:  Shazia N Aslam; Philip C Stevenson; Tetsuo Kokubun; David R Hall
Journal:  Microbiol Res       Date:  2007-04-05       Impact factor: 5.415

7.  5-Cyclo-hexyl-3-(4-fluoro-phenyl-sulfon-yl)-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-02

8.  5-Cyclo-hexyl-2-methyl-3-phenyl-sulfonyl-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-25

9.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  9 in total
  3 in total

1.  3-(2-Bromo-phenyl-sulfon-yl)-5-cyclo-hexyl-2-methyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-22

2.  5-Cyclo-hexyl-2-methyl-3-(4-methyl-phenyl-sulfon-yl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-14

3.  5-Cyclo-hexyl-2-methyl-3-(3-methyl-phenyl-sulfon-yl)-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-03-29
  3 in total

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