| Literature DB >> 22347043 |
Yan Jiang1, Jing Bian, Xiaoqiang Sun.
Abstract
In the title compound, C(17)H(20)N(2)O(2)S(2), the five-membered heterocycle exhibits an envelope conformation and the mol-ecular chirality and configuration are well preserved from l-tartaric acid. The dihedral angle between the two thio-phene rings is 17.0 (2)°. In the crystal, mol-ecules are linked by C-H⋯O and C-H⋯S hydrogen inter-actions, which are effective in the stabilization of the crystal structure.Entities:
Year: 2012 PMID: 22347043 PMCID: PMC3275187 DOI: 10.1107/S1600536812001298
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H20N2O2S2 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1762 reflections |
| θ = 2.6–24.3° | |
| µ = 0.31 mm−1 | |
| β = 92.339 (4)° | Block, colourless |
| 0.20 × 0.18 × 0.15 mm | |
| Bruker SMART CCD area-detector diffractometer | 3140 independent reflections |
| Radiation source: fine-focus sealed tube | 2575 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.5°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 5249 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3140 reflections | Δρmax = 0.14 e Å−3 |
| 211 parameters | Δρmin = −0.18 e Å−3 |
| 19 restraints | Absolute structure: Flack (1983), 1322 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.00 (8) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.51034 (7) | 0.34500 (12) | 0.54421 (6) | 0.0557 (2) | |
| S2 | 1.38990 (7) | 0.13103 (10) | 1.18352 (6) | 0.0563 (2) | |
| C1 | 0.5853 (2) | 0.1387 (4) | 0.7331 (2) | 0.0410 (6) | |
| H1 | 0.5679 | 0.0569 | 0.7911 | 0.049* | |
| C2 | 0.4830 (2) | 0.1972 (4) | 0.6549 (2) | 0.0401 (6) | |
| N1 | 0.6976 (2) | 0.1954 (3) | 0.72485 (19) | 0.0479 (6) | |
| C3 | 1.4097 (2) | 0.2230 (4) | 1.0493 (2) | 0.0437 (6) | |
| O1 | 1.10405 (16) | −0.0651 (3) | 0.77918 (17) | 0.0565 (5) | |
| C4 | 1.3054 (3) | 0.2405 (4) | 0.9630 (2) | 0.0471 (7) | |
| H4 | 1.3210 | 0.3027 | 0.8953 | 0.056* | |
| N2 | 1.1964 (2) | 0.1774 (4) | 0.97401 (19) | 0.0530 (6) | |
| C5 | 1.0211 (3) | −0.1649 (4) | 0.7025 (2) | 0.0537 (7) | |
| C6 | 1.1023 (3) | 0.2134 (4) | 0.8812 (3) | 0.0531 (7) | |
| H6A | 1.1456 | 0.2609 | 0.8151 | 0.064* | |
| H6B | 1.0440 | 0.3046 | 0.9069 | 0.064* | |
| C7 | 0.7933 (3) | 0.1333 (5) | 0.8120 (2) | 0.0567 (8) | |
| H7A | 0.7628 | 0.0256 | 0.8487 | 0.068* | |
| H7B | 0.8061 | 0.2240 | 0.8715 | 0.068* | |
| C8 | 1.5345 (3) | 0.2735 (4) | 1.0366 (2) | 0.0495 (7) | |
| H8 | 1.5644 | 0.3257 | 0.9698 | 0.059* | |
| C9 | 1.6117 (3) | 0.2371 (5) | 1.1363 (3) | 0.0608 (8) | |
| H9 | 1.6984 | 0.2638 | 1.1430 | 0.073* | |
| C10 | 0.3523 (3) | 0.3486 (6) | 0.5036 (3) | 0.0653 (8) | |
| H10 | 0.3180 | 0.4158 | 0.4419 | 0.078* | |
| C11 | 0.9188 (2) | 0.0949 (4) | 0.7565 (2) | 0.0457 (7) | |
| H11 | 0.9426 | 0.1971 | 0.7088 | 0.055* | |
| O2 | 0.90851 (19) | −0.0604 (3) | 0.6865 (2) | 0.0779 (7) | |
| C12 | 0.3575 (3) | 0.1538 (5) | 0.6571 (2) | 0.0538 (7) | |
| H12 | 0.3242 | 0.0739 | 0.7097 | 0.065* | |
| C13 | 0.2831 (3) | 0.2434 (5) | 0.5706 (3) | 0.0670 (9) | |
| H13 | 0.1949 | 0.2306 | 0.5612 | 0.080* | |
| C14 | 1.5472 (3) | 0.1603 (5) | 1.2200 (3) | 0.0615 (9) | |
| H14 | 1.5845 | 0.1262 | 1.2912 | 0.074* | |
| C15 | 1.0267 (2) | 0.0527 (4) | 0.8430 (2) | 0.0453 (7) | |
| H15 | 0.9937 | −0.0092 | 0.9105 | 0.054* | |
| C16 | 0.9858 (4) | −0.3401 (5) | 0.7552 (4) | 0.0851 (11) | |
| H16A | 0.9536 | −0.3199 | 0.8308 | 0.128* | |
| H16B | 1.0599 | −0.4155 | 0.7617 | 0.128* | |
| H16C | 0.9212 | −0.3972 | 0.7067 | 0.128* | |
| C17 | 1.0853 (3) | −0.1869 (6) | 0.5889 (3) | 0.0855 (12) | |
| H17A | 1.0303 | −0.2529 | 0.5358 | 0.128* | |
| H17B | 1.1642 | −0.2504 | 0.6016 | 0.128* | |
| H17C | 1.1022 | −0.0712 | 0.5568 | 0.128* |
| S1 | 0.0541 (4) | 0.0605 (5) | 0.0525 (4) | 0.0002 (4) | 0.0023 (3) | 0.0154 (4) |
| S2 | 0.0611 (5) | 0.0610 (5) | 0.0466 (4) | −0.0102 (4) | −0.0018 (3) | 0.0023 (4) |
| C1 | 0.0447 (15) | 0.0404 (15) | 0.0378 (13) | 0.0071 (13) | 0.0013 (11) | −0.0003 (13) |
| C2 | 0.0392 (14) | 0.0417 (15) | 0.0394 (13) | 0.0054 (12) | 0.0011 (11) | −0.0008 (12) |
| N1 | 0.0394 (13) | 0.0531 (16) | 0.0507 (13) | 0.0081 (11) | −0.0034 (10) | 0.0050 (11) |
| C3 | 0.0493 (16) | 0.0386 (15) | 0.0428 (14) | −0.0064 (13) | −0.0028 (12) | −0.0072 (12) |
| O1 | 0.0404 (10) | 0.0560 (13) | 0.0717 (12) | 0.0093 (9) | −0.0144 (9) | −0.0117 (11) |
| C4 | 0.0574 (18) | 0.0430 (16) | 0.0401 (14) | −0.0056 (14) | −0.0061 (13) | −0.0031 (13) |
| N2 | 0.0486 (13) | 0.0649 (18) | 0.0445 (12) | −0.0056 (12) | −0.0102 (10) | −0.0034 (12) |
| C5 | 0.0486 (15) | 0.0469 (17) | 0.0646 (17) | 0.0053 (15) | −0.0102 (13) | −0.0117 (16) |
| C6 | 0.0515 (16) | 0.0516 (19) | 0.0553 (17) | 0.0053 (14) | −0.0082 (14) | −0.0019 (15) |
| C7 | 0.0461 (16) | 0.072 (2) | 0.0519 (16) | 0.0054 (16) | −0.0050 (13) | 0.0108 (17) |
| C8 | 0.0515 (18) | 0.0472 (17) | 0.0497 (16) | −0.0113 (13) | 0.0018 (14) | −0.0049 (14) |
| C9 | 0.0450 (16) | 0.062 (2) | 0.075 (2) | −0.0085 (15) | −0.0073 (16) | −0.0150 (18) |
| C10 | 0.0618 (19) | 0.077 (2) | 0.0566 (17) | 0.008 (2) | −0.0081 (15) | 0.020 (2) |
| C11 | 0.0415 (14) | 0.0458 (17) | 0.0489 (14) | 0.0037 (12) | −0.0092 (12) | −0.0010 (12) |
| O2 | 0.0607 (13) | 0.0720 (16) | 0.0975 (16) | 0.0196 (12) | −0.0402 (12) | −0.0357 (14) |
| C12 | 0.0469 (15) | 0.063 (2) | 0.0516 (16) | −0.0044 (15) | 0.0005 (13) | 0.0115 (16) |
| C13 | 0.0433 (17) | 0.084 (3) | 0.072 (2) | 0.0022 (17) | −0.0138 (16) | 0.015 (2) |
| C14 | 0.0631 (19) | 0.061 (2) | 0.0581 (18) | 0.0014 (17) | −0.0218 (15) | 0.0003 (17) |
| C15 | 0.0390 (14) | 0.0486 (16) | 0.0476 (15) | 0.0041 (13) | −0.0089 (12) | 0.0022 (14) |
| C16 | 0.086 (2) | 0.061 (2) | 0.108 (3) | −0.010 (2) | −0.003 (2) | 0.004 (2) |
| C17 | 0.073 (2) | 0.106 (4) | 0.077 (2) | −0.012 (2) | 0.0019 (19) | −0.017 (2) |
| S1—C10 | 1.703 (3) | C7—H7A | 0.9700 |
| S1—C2 | 1.721 (3) | C7—H7B | 0.9700 |
| S2—C14 | 1.699 (3) | C8—C9 | 1.404 (4) |
| S2—C3 | 1.714 (3) | C8—H8 | 0.9300 |
| C1—N1 | 1.258 (3) | C9—C14 | 1.331 (5) |
| C1—C2 | 1.440 (3) | C9—H9 | 0.9300 |
| C1—H1 | 0.9300 | C10—C13 | 1.337 (5) |
| C2—C12 | 1.355 (4) | C10—H10 | 0.9300 |
| N1—C7 | 1.466 (3) | C11—O2 | 1.417 (3) |
| C3—C8 | 1.375 (4) | C11—C15 | 1.510 (3) |
| C3—C4 | 1.453 (3) | C11—H11 | 0.9800 |
| O1—C15 | 1.422 (3) | C12—C13 | 1.410 (4) |
| O1—C5 | 1.425 (3) | C12—H12 | 0.9300 |
| C4—N2 | 1.247 (4) | C13—H13 | 0.9300 |
| C4—H4 | 0.9300 | C14—H14 | 0.9300 |
| N2—C6 | 1.450 (3) | C15—H15 | 0.9800 |
| C5—O2 | 1.421 (3) | C16—H16A | 0.9600 |
| C5—C16 | 1.497 (5) | C16—H16B | 0.9600 |
| C5—C17 | 1.505 (4) | C16—H16C | 0.9600 |
| C6—C15 | 1.496 (4) | C17—H17A | 0.9600 |
| C6—H6A | 0.9700 | C17—H17B | 0.9600 |
| C6—H6B | 0.9700 | C17—H17C | 0.9600 |
| C7—C11 | 1.513 (4) | ||
| C10—S1—C2 | 91.42 (15) | C14—C9—H9 | 123.7 |
| C14—S2—C3 | 91.17 (15) | C8—C9—H9 | 123.7 |
| N1—C1—C2 | 121.6 (3) | C13—C10—S1 | 112.0 (2) |
| N1—C1—H1 | 119.2 | C13—C10—H10 | 124.0 |
| C2—C1—H1 | 119.2 | S1—C10—H10 | 124.0 |
| C12—C2—C1 | 127.8 (3) | O2—C11—C15 | 104.0 (2) |
| C12—C2—S1 | 111.0 (2) | O2—C11—C7 | 110.4 (2) |
| C1—C2—S1 | 121.2 (2) | C15—C11—C7 | 113.6 (2) |
| C1—N1—C7 | 117.2 (2) | O2—C11—H11 | 109.5 |
| C8—C3—C4 | 126.4 (3) | C15—C11—H11 | 109.5 |
| C8—C3—S2 | 110.9 (2) | C7—C11—H11 | 109.5 |
| C4—C3—S2 | 122.6 (2) | C11—O2—C5 | 109.5 (2) |
| C15—O1—C5 | 107.45 (19) | C2—C12—C13 | 112.4 (3) |
| N2—C4—C3 | 124.2 (3) | C2—C12—H12 | 123.8 |
| N2—C4—H4 | 117.9 | C13—C12—H12 | 123.8 |
| C3—C4—H4 | 117.9 | C10—C13—C12 | 113.1 (3) |
| C4—N2—C6 | 116.9 (2) | C10—C13—H13 | 123.5 |
| O2—C5—O1 | 105.9 (2) | C12—C13—H13 | 123.5 |
| O2—C5—C16 | 108.4 (3) | C9—C14—S2 | 113.0 (2) |
| O1—C5—C16 | 111.2 (3) | C9—C14—H14 | 123.5 |
| O2—C5—C17 | 110.2 (3) | S2—C14—H14 | 123.5 |
| O1—C5—C17 | 108.3 (3) | O1—C15—C6 | 110.1 (2) |
| C16—C5—C17 | 112.6 (3) | O1—C15—C11 | 102.4 (2) |
| N2—C6—C15 | 113.8 (2) | C6—C15—C11 | 113.5 (2) |
| N2—C6—H6A | 108.8 | O1—C15—H15 | 110.2 |
| C15—C6—H6A | 108.8 | C6—C15—H15 | 110.2 |
| N2—C6—H6B | 108.8 | C11—C15—H15 | 110.2 |
| C15—C6—H6B | 108.8 | C5—C16—H16A | 109.5 |
| H6A—C6—H6B | 107.7 | C5—C16—H16B | 109.5 |
| N1—C7—C11 | 110.6 (2) | H16A—C16—H16B | 109.5 |
| N1—C7—H7A | 109.5 | C5—C16—H16C | 109.5 |
| C11—C7—H7A | 109.5 | H16A—C16—H16C | 109.5 |
| N1—C7—H7B | 109.5 | H16B—C16—H16C | 109.5 |
| C11—C7—H7B | 109.5 | C5—C17—H17A | 109.5 |
| H7A—C7—H7B | 108.1 | C5—C17—H17B | 109.5 |
| C3—C8—C9 | 112.2 (3) | H17A—C17—H17B | 109.5 |
| C3—C8—H8 | 123.9 | C5—C17—H17C | 109.5 |
| C9—C8—H8 | 123.9 | H17A—C17—H17C | 109.5 |
| C14—C9—C8 | 112.7 (3) | H17B—C17—H17C | 109.5 |
| N1—C1—C2—C12 | −176.7 (3) | N1—C7—C11—C15 | 172.7 (3) |
| N1—C1—C2—S1 | 1.3 (4) | C15—C11—O2—C5 | −16.5 (3) |
| C10—S1—C2—C12 | 0.7 (3) | C7—C11—O2—C5 | −138.8 (3) |
| C10—S1—C2—C1 | −177.6 (2) | O1—C5—O2—C11 | −3.2 (3) |
| C2—C1—N1—C7 | 177.3 (2) | C16—C5—O2—C11 | 116.2 (3) |
| C14—S2—C3—C8 | −0.2 (2) | C17—C5—O2—C11 | −120.1 (3) |
| C14—S2—C3—C4 | 179.2 (3) | C1—C2—C12—C13 | 176.8 (3) |
| C8—C3—C4—N2 | 172.8 (3) | S1—C2—C12—C13 | −1.3 (4) |
| S2—C3—C4—N2 | −6.5 (4) | S1—C10—C13—C12 | −0.8 (4) |
| C3—C4—N2—C6 | 177.7 (3) | C2—C12—C13—C10 | 1.4 (5) |
| C15—O1—C5—O2 | 23.2 (3) | C8—C9—C14—S2 | −0.9 (4) |
| C15—O1—C5—C16 | −94.4 (3) | C3—S2—C14—C9 | 0.6 (3) |
| C15—O1—C5—C17 | 141.4 (3) | C5—O1—C15—C6 | −153.6 (2) |
| C4—N2—C6—C15 | 134.1 (3) | C5—O1—C15—C11 | −32.6 (3) |
| C1—N1—C7—C11 | 140.1 (3) | N2—C6—C15—O1 | −72.7 (3) |
| C4—C3—C8—C9 | −179.6 (3) | N2—C6—C15—C11 | 173.2 (2) |
| S2—C3—C8—C9 | −0.2 (3) | O2—C11—C15—O1 | 29.7 (3) |
| C3—C8—C9—C14 | 0.7 (4) | C7—C11—C15—O1 | 149.8 (3) |
| C2—S1—C10—C13 | 0.1 (3) | O2—C11—C15—C6 | 148.3 (2) |
| N1—C7—C11—O2 | −70.8 (3) | C7—C11—C15—C6 | −91.5 (3) |
| H··· | ||||
| C9—H9···O1i | 0.93 | 2.56 | 3.431 (4) | 155 |
| C8—H8···S2i | 0.93 | 2.94 | 3.793 (3) | 153 |
| C12—H12···O1ii | 0.93 | 2.68 | 3.466 (4) | 143 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9⋯O1i | 0.93 | 2.56 | 3.431 (4) | 155 |
| C8—H8⋯S2i | 0.93 | 2.94 | 3.793 (3) | 153 |
| C12—H12⋯O1ii | 0.93 | 2.68 | 3.466 (4) | 143 |
Symmetry codes: (i) ; (ii) .