Literature DB >> 22347001

2-(4-Chloro-N-{2-[(1H-pyrrol-2-yl)carbon-yloxy]eth-yl}anilino)ethyl 1H-pyrrole-2-carboxyl-ate.

Ying Yan, Guilong Zhang, Zhenming Yin.   

Abstract

In the title mol-ecule, C(20)H(20)ClN(3)O(4), both the pyrrole N-H groups adopt a syn conformation with respect to the carbonyl groups. In the crystal, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into layers parallel to (102).

Entities:  

Year:  2012        PMID: 22347001      PMCID: PMC3275056          DOI: 10.1107/S1600536811056170

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of related pyrrole-2-carboxyl­ate derivatives, see: Sessler et al. (2003 ▶); Yin & Li (2006 ▶); Maeda et al. (2007 ▶); Cui et al. (2009 ▶).

Experimental

Crystal data

C20H20ClN3O4 M = 401.84 Monoclinic, a = 19.972 (2) Å b = 4.7426 (5) Å c = 20.613 (2) Å β = 95.815 (2)° V = 1942.4 (4) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 296 K 0.28 × 0.20 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1999 ▶) T min = 0.488, T max = 1.000 9198 measured reflections 3438 independent reflections 1763 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.106 S = 1.01 3438 reflections 254 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.24 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811056170/cv5220sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811056170/cv5220Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811056170/cv5220Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H20ClN3O4Dx = 1.374 Mg m3
Mr = 401.84Melting point: 438 K
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 19.972 (2) ÅCell parameters from 1561 reflections
b = 4.7426 (5) Åθ = 2.7–21.7°
c = 20.613 (2) ŵ = 0.23 mm1
β = 95.815 (2)°T = 296 K
V = 1942.4 (4) Å3Block, yellow
Z = 40.28 × 0.20 × 0.18 mm
F(000) = 840
Bruker SMART CCD area-detector diffractometer3438 independent reflections
Radiation source: fine-focus sealed tube1763 reflections with I > 2σ(I)
graphiteRint = 0.046
phi and ω scansθmax = 25.0°, θmin = 1.0°
Absorption correction: multi-scan (SADABS; Bruker, 1999)h = −23→23
Tmin = 0.488, Tmax = 1.000k = −5→5
9198 measured reflectionsl = −24→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.038H-atom parameters constrained
wR(F2) = 0.106w = 1/[σ2(Fo2) + (0.0324P)2 + 0.5658P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
3438 reflectionsΔρmax = 0.15 e Å3
254 parametersΔρmin = −0.24 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0036 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.28670 (5)0.3365 (2)0.13385 (4)0.0869 (4)
O10.42313 (10)1.2588 (4)0.50098 (10)0.0631 (6)
O20.37700 (9)0.9028 (4)0.43966 (8)0.0556 (6)
O30.06269 (9)0.9926 (4)0.41172 (8)0.0526 (5)
O40.05353 (10)1.1201 (5)0.30620 (8)0.0639 (6)
N10.51710 (12)1.3321 (5)0.40646 (11)0.0548 (6)
H10.52501.45240.43750.066*
N20.23923 (11)0.7752 (5)0.39523 (11)0.0527 (7)
N3−0.05067 (11)1.4950 (5)0.33134 (10)0.0529 (7)
H3−0.04121.51100.29170.063*
C10.55231 (16)1.3079 (7)0.35432 (15)0.0637 (9)
H1A0.58921.41690.34620.076*
C20.52445 (16)1.0957 (7)0.31537 (15)0.0642 (9)
H20.53881.03510.27610.077*
C30.47069 (15)0.9876 (7)0.34556 (14)0.0561 (8)
H3A0.44240.84140.33010.067*
C40.46687 (14)1.1355 (6)0.40230 (13)0.0464 (7)
C50.42220 (14)1.1110 (7)0.45249 (14)0.0472 (7)
C60.32809 (13)0.8638 (7)0.48606 (12)0.0538 (8)
H6A0.30821.04320.49610.065*
H6B0.34940.78310.52620.065*
C70.27484 (14)0.6671 (6)0.45514 (13)0.0541 (8)
H7A0.29580.48910.44580.065*
H7B0.24250.63010.48620.065*
C80.25169 (13)0.6761 (6)0.33371 (13)0.0469 (7)
C90.30389 (14)0.4884 (7)0.32549 (14)0.0570 (8)
H90.33240.43200.36160.068*
C100.31402 (15)0.3851 (7)0.26484 (16)0.0645 (9)
H100.34810.25470.26070.077*
C110.27436 (16)0.4726 (7)0.21056 (14)0.0575 (8)
C120.22420 (15)0.6637 (7)0.21674 (14)0.0600 (9)
H120.19780.72650.17980.072*
C130.21230 (14)0.7647 (7)0.27770 (14)0.0556 (8)
H130.17760.89300.28120.067*
C140.18334 (13)0.9640 (6)0.40279 (13)0.0529 (8)
H14A0.18081.10520.36860.063*
H14B0.19101.06040.44440.063*
C150.11705 (13)0.8046 (6)0.39957 (14)0.0530 (8)
H15A0.10760.71940.35680.064*
H15B0.12040.65480.43180.064*
C160.03441 (14)1.1389 (6)0.36010 (13)0.0461 (7)
C17−0.01934 (13)1.3157 (6)0.37684 (12)0.0423 (7)
C18−0.04881 (14)1.3549 (6)0.43337 (13)0.0534 (8)
H18−0.03751.26210.47270.064*
C19−0.09868 (15)1.5583 (7)0.42135 (15)0.0643 (9)
H19−0.12701.62520.45100.077*
C20−0.09841 (15)1.6418 (7)0.35789 (15)0.0623 (9)
H20−0.12651.77700.33680.075*
U11U22U33U12U13U23
Cl10.0873 (7)0.1160 (8)0.0615 (5)0.0033 (6)0.0274 (5)−0.0115 (5)
O10.0676 (14)0.0668 (15)0.0543 (12)−0.0081 (12)0.0035 (10)−0.0143 (12)
O20.0497 (12)0.0689 (15)0.0488 (12)−0.0128 (12)0.0084 (9)−0.0084 (11)
O30.0464 (12)0.0692 (14)0.0436 (11)0.0102 (11)0.0116 (9)0.0052 (11)
O40.0646 (13)0.0917 (17)0.0371 (11)0.0102 (13)0.0130 (10)−0.0033 (11)
N10.0536 (15)0.0539 (16)0.0562 (15)−0.0041 (14)0.0022 (12)−0.0013 (13)
N20.0418 (14)0.0638 (18)0.0517 (15)0.0093 (13)0.0004 (12)0.0011 (13)
N30.0504 (15)0.0690 (18)0.0393 (13)−0.0003 (14)0.0051 (12)0.0025 (13)
C10.057 (2)0.070 (2)0.065 (2)−0.0030 (19)0.0110 (17)0.011 (2)
C20.066 (2)0.073 (3)0.0548 (19)0.000 (2)0.0137 (17)−0.0007 (19)
C30.056 (2)0.060 (2)0.0521 (18)−0.0013 (18)0.0028 (15)0.0004 (17)
C40.0407 (17)0.048 (2)0.0491 (18)−0.0010 (16)−0.0021 (14)0.0025 (16)
C50.0410 (18)0.050 (2)0.0480 (18)0.0039 (16)−0.0082 (14)0.0029 (16)
C60.0490 (18)0.069 (2)0.0436 (17)−0.0018 (17)0.0064 (14)0.0031 (16)
C70.0493 (18)0.060 (2)0.0545 (18)−0.0017 (17)0.0110 (15)0.0118 (16)
C80.0389 (17)0.051 (2)0.0515 (18)−0.0034 (16)0.0086 (14)0.0023 (16)
C90.0475 (19)0.068 (2)0.0551 (19)0.0104 (17)0.0031 (15)0.0016 (17)
C100.054 (2)0.069 (2)0.073 (2)0.0122 (19)0.0160 (17)0.000 (2)
C110.054 (2)0.068 (2)0.0529 (19)−0.0033 (19)0.0168 (16)0.0008 (18)
C120.056 (2)0.072 (2)0.0517 (19)0.0008 (19)0.0040 (15)0.0119 (18)
C130.0483 (18)0.062 (2)0.0566 (19)0.0061 (16)0.0055 (15)0.0055 (17)
C140.0424 (18)0.059 (2)0.0574 (18)0.0011 (17)0.0052 (14)−0.0062 (16)
C150.0446 (18)0.056 (2)0.0594 (18)0.0049 (17)0.0116 (14)0.0029 (16)
C160.0433 (17)0.057 (2)0.0384 (17)−0.0065 (16)0.0047 (14)−0.0002 (16)
C170.0409 (16)0.0530 (19)0.0324 (14)0.0004 (15)0.0010 (12)0.0011 (14)
C180.0558 (19)0.065 (2)0.0404 (16)0.0045 (18)0.0113 (14)0.0016 (16)
C190.062 (2)0.075 (3)0.058 (2)0.013 (2)0.0159 (17)−0.0068 (18)
C200.053 (2)0.065 (2)0.067 (2)0.0095 (18)0.0005 (17)0.0014 (19)
Cl1—C111.748 (3)C6—H6B0.9700
O1—C51.219 (3)C7—H7A0.9700
O2—C51.346 (3)C7—H7B0.9700
O2—C61.447 (3)C8—C91.394 (4)
O3—C161.345 (3)C8—C131.395 (4)
O3—C151.446 (3)C9—C101.377 (4)
O4—C161.214 (3)C9—H90.9300
N1—C11.347 (3)C10—C111.368 (4)
N1—C41.366 (3)C10—H100.9300
N1—H10.8600C11—C121.366 (4)
N2—C81.398 (3)C12—C131.387 (4)
N2—C141.452 (3)C12—H120.9300
N2—C71.455 (3)C13—H130.9300
N3—C201.341 (3)C14—C151.520 (4)
N3—C171.370 (3)C14—H14A0.9700
N3—H30.8600C14—H14B0.9700
C1—C21.370 (4)C15—H15A0.9700
C1—H1A0.9300C15—H15B0.9700
C2—C31.392 (4)C16—C171.432 (4)
C2—H20.9300C17—C181.370 (3)
C3—C41.372 (4)C18—C191.391 (4)
C3—H3A0.9300C18—H180.9300
C4—C51.438 (4)C19—C201.367 (4)
C6—C71.507 (4)C19—H190.9300
C6—H6A0.9700C20—H200.9300
C5—O2—C6116.6 (2)C10—C9—H9119.4
C16—O3—C15116.3 (2)C8—C9—H9119.4
C1—N1—C4109.3 (3)C11—C10—C9120.6 (3)
C1—N1—H1125.3C11—C10—H10119.7
C4—N1—H1125.3C9—C10—H10119.7
C8—N2—C14120.9 (2)C12—C11—C10119.6 (3)
C8—N2—C7122.3 (2)C12—C11—Cl1120.1 (2)
C14—N2—C7116.2 (2)C10—C11—Cl1120.3 (3)
C20—N3—C17109.7 (2)C11—C12—C13120.5 (3)
C20—N3—H3125.1C11—C12—H12119.7
C17—N3—H3125.1C13—C12—H12119.7
N1—C1—C2108.4 (3)C12—C13—C8120.8 (3)
N1—C1—H1A125.8C12—C13—H13119.6
C2—C1—H1A125.8C8—C13—H13119.6
C1—C2—C3107.1 (3)N2—C14—C15111.4 (2)
C1—C2—H2126.4N2—C14—H14A109.4
C3—C2—H2126.4C15—C14—H14A109.4
C4—C3—C2107.7 (3)N2—C14—H14B109.4
C4—C3—H3A126.1C15—C14—H14B109.4
C2—C3—H3A126.1H14A—C14—H14B108.0
N1—C4—C3107.4 (3)O3—C15—C14110.6 (2)
N1—C4—C5121.0 (3)O3—C15—H15A109.5
C3—C4—C5131.6 (3)C14—C15—H15A109.5
O1—C5—O2122.5 (3)O3—C15—H15B109.5
O1—C5—C4125.7 (3)C14—C15—H15B109.5
O2—C5—C4111.8 (3)H15A—C15—H15B108.1
O2—C6—C7107.1 (2)O4—C16—O3122.7 (3)
O2—C6—H6A110.3O4—C16—C17125.2 (3)
C7—C6—H6A110.3O3—C16—C17112.1 (2)
O2—C6—H6B110.3N3—C17—C18107.0 (3)
C7—C6—H6B110.3N3—C17—C16120.0 (2)
H6A—C6—H6B108.5C18—C17—C16133.0 (3)
N2—C7—C6113.8 (2)C17—C18—C19107.7 (3)
N2—C7—H7A108.8C17—C18—H18126.1
C6—C7—H7A108.8C19—C18—H18126.1
N2—C7—H7B108.8C20—C19—C18107.4 (3)
C6—C7—H7B108.8C20—C19—H19126.3
H7A—C7—H7B107.7C18—C19—H19126.3
C9—C8—C13117.3 (3)N3—C20—C19108.2 (3)
C9—C8—N2121.9 (3)N3—C20—H20125.9
C13—C8—N2120.8 (3)C19—C20—H20125.9
C10—C9—C8121.2 (3)
C4—N1—C1—C20.6 (3)C9—C10—C11—C12−0.2 (5)
N1—C1—C2—C3−0.3 (3)C9—C10—C11—Cl1−179.0 (2)
C1—C2—C3—C4−0.1 (3)C10—C11—C12—C13−1.4 (5)
C1—N1—C4—C3−0.7 (3)Cl1—C11—C12—C13177.5 (2)
C1—N1—C4—C5178.8 (3)C11—C12—C13—C80.7 (5)
C2—C3—C4—N10.5 (3)C9—C8—C13—C121.4 (4)
C2—C3—C4—C5−178.9 (3)N2—C8—C13—C12−179.2 (3)
C6—O2—C5—O10.9 (4)C8—N2—C14—C1578.5 (3)
C6—O2—C5—C4−178.3 (2)C7—N2—C14—C15−93.4 (3)
N1—C4—C5—O11.7 (4)C16—O3—C15—C1484.3 (3)
C3—C4—C5—O1−179.0 (3)N2—C14—C15—O3176.0 (2)
N1—C4—C5—O2−179.1 (2)C15—O3—C16—O4−1.2 (4)
C3—C4—C5—O20.2 (4)C15—O3—C16—C17179.2 (2)
C5—O2—C6—C7168.1 (2)C20—N3—C17—C18−0.2 (3)
C8—N2—C7—C6104.4 (3)C20—N3—C17—C16−179.1 (3)
C14—N2—C7—C6−83.8 (3)O4—C16—C17—N3−4.3 (4)
O2—C6—C7—N2−61.2 (3)O3—C16—C17—N3175.3 (2)
C14—N2—C8—C9−178.2 (3)O4—C16—C17—C18177.1 (3)
C7—N2—C8—C9−6.8 (4)O3—C16—C17—C18−3.3 (4)
C14—N2—C8—C132.5 (4)N3—C17—C18—C190.5 (3)
C7—N2—C8—C13173.8 (3)C16—C17—C18—C19179.2 (3)
C13—C8—C9—C10−3.0 (4)C17—C18—C19—C20−0.6 (4)
N2—C8—C9—C10177.7 (3)C17—N3—C20—C19−0.1 (3)
C8—C9—C10—C112.4 (5)C18—C19—C20—N30.4 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.862.072.893 (3)160
N3—H3···O4ii0.862.072.891 (3)158
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.862.072.893 (3)160
N3—H3⋯O4ii0.862.072.891 (3)158

Symmetry codes: (i) ; (ii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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