Literature DB >> 22346996

5-Bromo-3-cyclo-pentyl-sulfinyl-2,7-dimethyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C(15)H(17)BrO(2)S, the cyclo-pentyl ring adopts an envelope conformation. In the crystal, mol-ecules are linked by weak C-H⋯O hydrogen bonds. A slipped π-π inter-action occurs between the furan and benzene rings of adjacent mol-ecules [centroid-centroid distance = 3.892 (3) Å and slippage = 1.786 (3) Å]. The crystal structure also exhibits a weak C-Br⋯π [2.919 (3) Å] inter-action.

Entities:  

Year:  2012        PMID: 22346996      PMCID: PMC3275051          DOI: 10.1107/S1600536811056091

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzofuran compounds, see: Aslam et al. (2009 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For the crystal structures of related compounds, see: Choi et al. (2011 ▶).

Experimental

Crystal data

C15H17BrO2S M = 341.26 Orthorhombic, a = 19.5624 (8) Å b = 8.3501 (4) Å c = 17.5346 (7) Å V = 2864.2 (2) Å3 Z = 8 Mo Kα radiation μ = 3.01 mm−1 T = 173 K 0.36 × 0.19 × 0.04 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.414, T max = 0.899 14696 measured reflections 3561 independent reflections 2232 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.094 S = 1.01 3561 reflections 174 parameters H-atom parameters constrained Δρmax = 0.43 e Å−3 Δρmin = −0.51 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811056091/xu5434sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811056091/xu5434Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811056091/xu5434Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H17BrO2SF(000) = 1392
Mr = 341.26Dx = 1.583 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 2605 reflections
a = 19.5624 (8) Åθ = 2.6–23.7°
b = 8.3501 (4) ŵ = 3.01 mm1
c = 17.5346 (7) ÅT = 173 K
V = 2864.2 (2) Å3Block, colourless
Z = 80.36 × 0.19 × 0.04 mm
Bruker SMART APEXII CCD diffractometer3561 independent reflections
Radiation source: rotating anode2232 reflections with I > 2σ(I)
graphite multilayerRint = 0.052
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 2.1°
φ and ω scansh = −18→25
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −11→11
Tmin = 0.414, Tmax = 0.899l = −23→17
14696 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: difference Fourier map
wR(F2) = 0.094H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0345P)2 + 1.0227P] where P = (Fo2 + 2Fc2)/3
3561 reflections(Δ/σ)max = 0.001
174 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = −0.51 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.746477 (15)0.35697 (4)0.531719 (18)0.04220 (13)
S10.58692 (4)0.79730 (10)0.30668 (4)0.0302 (2)
O10.49506 (9)0.7539 (2)0.50628 (9)0.0242 (4)
O20.61660 (12)0.6477 (3)0.27475 (11)0.0467 (6)
C10.55893 (14)0.7536 (3)0.39992 (14)0.0224 (6)
C20.59386 (14)0.6560 (3)0.45635 (14)0.0210 (6)
C30.65304 (14)0.5643 (3)0.45788 (14)0.0233 (6)
H30.68190.55420.41460.028*
C40.66740 (13)0.4885 (3)0.52599 (15)0.0249 (6)
C50.62665 (13)0.5023 (3)0.59087 (15)0.0236 (6)
H50.64000.45010.63660.028*
C60.56704 (14)0.5911 (3)0.58952 (15)0.0215 (6)
C70.55264 (13)0.6627 (3)0.52041 (14)0.0195 (6)
C80.50046 (14)0.8064 (3)0.43205 (15)0.0239 (6)
C90.52221 (14)0.6084 (3)0.65801 (15)0.0286 (7)
H9A0.52160.72080.67420.043*
H9B0.54000.54170.69950.043*
H9C0.47570.57420.64520.043*
C100.44272 (14)0.9041 (4)0.40406 (17)0.0332 (7)
H10A0.44900.92650.34960.050*
H10B0.44101.00530.43240.050*
H10C0.39990.84550.41160.050*
C110.65806 (14)0.9260 (3)0.33175 (15)0.0258 (7)
H110.69000.86870.36690.031*
C120.63212 (15)1.0808 (4)0.36924 (17)0.0356 (8)
H12A0.58151.08490.36860.043*
H12B0.64801.08830.42270.043*
C130.66218 (16)1.2156 (4)0.32140 (17)0.0371 (8)
H13A0.63121.30920.32050.044*
H13B0.70711.24950.34170.044*
C140.66965 (16)1.1439 (4)0.24250 (18)0.0385 (8)
H14A0.62521.14050.21560.046*
H14B0.70271.20550.21140.046*
C150.69583 (15)0.9771 (3)0.25871 (15)0.0298 (7)
H15A0.74590.97790.26690.036*
H15B0.68510.90370.21600.036*
U11U22U33U12U13U23
Br10.0393 (2)0.0479 (2)0.0394 (2)0.01898 (17)0.00616 (15)0.00728 (15)
S10.0354 (5)0.0370 (4)0.0182 (4)−0.0105 (4)−0.0025 (3)0.0023 (3)
O10.0247 (11)0.0265 (11)0.0214 (10)−0.0013 (10)0.0002 (8)0.0014 (8)
O20.0728 (17)0.0374 (13)0.0298 (12)−0.0144 (12)0.0162 (11)−0.0126 (10)
C10.0270 (16)0.0230 (15)0.0173 (14)−0.0050 (13)−0.0028 (12)0.0002 (11)
C20.0232 (15)0.0227 (15)0.0169 (14)−0.0049 (13)−0.0009 (12)−0.0021 (11)
C30.0249 (16)0.0252 (15)0.0199 (15)−0.0049 (13)0.0051 (12)−0.0032 (12)
C40.0235 (16)0.0217 (15)0.0296 (16)0.0029 (13)−0.0017 (13)−0.0022 (12)
C50.0305 (16)0.0215 (14)0.0189 (14)−0.0019 (13)0.0009 (12)0.0010 (12)
C60.0267 (16)0.0178 (14)0.0199 (14)−0.0047 (12)0.0018 (12)−0.0041 (11)
C70.0190 (15)0.0193 (14)0.0202 (14)−0.0022 (12)−0.0019 (12)−0.0014 (11)
C80.0270 (17)0.0226 (15)0.0219 (14)−0.0063 (13)−0.0070 (12)0.0015 (12)
C90.0303 (17)0.0327 (17)0.0229 (15)0.0004 (14)0.0052 (13)0.0030 (12)
C100.0351 (18)0.0300 (17)0.0345 (18)−0.0006 (14)−0.0069 (14)0.0026 (14)
C110.0230 (16)0.0281 (16)0.0262 (15)0.0006 (13)0.0001 (13)0.0025 (12)
C120.0340 (19)0.0309 (18)0.0419 (19)−0.0032 (15)0.0092 (15)−0.0070 (14)
C130.0345 (19)0.0282 (18)0.049 (2)−0.0037 (15)0.0022 (15)−0.0062 (15)
C140.040 (2)0.0314 (18)0.044 (2)−0.0028 (15)−0.0053 (15)0.0088 (15)
C150.0290 (17)0.0310 (17)0.0295 (16)−0.0032 (15)0.0038 (13)0.0040 (13)
Br1—C41.900 (3)C9—H9B0.9800
S1—O21.487 (2)C9—H9C0.9800
S1—C11.762 (3)C10—H10A0.9800
S1—C111.813 (3)C10—H10B0.9800
O1—C81.378 (3)C10—H10C0.9800
O1—C71.382 (3)C11—C121.536 (4)
C1—C81.349 (4)C11—C151.539 (4)
C1—C21.453 (4)C11—H111.0000
C2—C71.384 (3)C12—C131.521 (4)
C2—C31.388 (4)C12—H12A0.9900
C3—C41.380 (3)C12—H12B0.9900
C3—H30.9500C13—C141.514 (4)
C4—C51.394 (3)C13—H13A0.9900
C5—C61.382 (4)C13—H13B0.9900
C5—H50.9500C14—C151.512 (4)
C6—C71.380 (3)C14—H14A0.9900
C6—C91.494 (4)C14—H14B0.9900
C8—C101.477 (4)C15—H15A0.9900
C9—H9A0.9800C15—H15B0.9900
O2—S1—C1107.27 (13)C8—C10—H10B109.5
O2—S1—C11106.84 (13)H10A—C10—H10B109.5
C1—S1—C1197.83 (12)C8—C10—H10C109.5
C8—O1—C7106.4 (2)H10A—C10—H10C109.5
C8—C1—C2107.3 (2)H10B—C10—H10C109.5
C8—C1—S1125.7 (2)C12—C11—C15106.4 (2)
C2—C1—S1127.0 (2)C12—C11—S1110.44 (19)
C7—C2—C3119.5 (2)C15—C11—S1109.33 (19)
C7—C2—C1104.8 (2)C12—C11—H11110.2
C3—C2—C1135.6 (2)C15—C11—H11110.2
C4—C3—C2116.0 (2)S1—C11—H11110.2
C4—C3—H3122.0C13—C12—C11105.0 (2)
C2—C3—H3122.0C13—C12—H12A110.8
C3—C4—C5123.5 (3)C11—C12—H12A110.8
C3—C4—Br1118.4 (2)C13—C12—H12B110.8
C5—C4—Br1118.1 (2)C11—C12—H12B110.8
C6—C5—C4120.9 (2)H12A—C12—H12B108.8
C6—C5—H5119.6C14—C13—C12104.4 (2)
C4—C5—H5119.6C14—C13—H13A110.9
C7—C6—C5114.8 (2)C12—C13—H13A110.9
C7—C6—C9122.9 (2)C14—C13—H13B110.9
C5—C6—C9122.3 (2)C12—C13—H13B110.9
C6—C7—O1124.2 (2)H13A—C13—H13B108.9
C6—C7—C2125.2 (3)C15—C14—C13103.0 (2)
O1—C7—C2110.6 (2)C15—C14—H14A111.2
C1—C8—O1110.8 (2)C13—C14—H14A111.2
C1—C8—C10133.6 (3)C15—C14—H14B111.2
O1—C8—C10115.5 (2)C13—C14—H14B111.2
C6—C9—H9A109.5H14A—C14—H14B109.1
C6—C9—H9B109.5C14—C15—C11104.4 (2)
H9A—C9—H9B109.5C14—C15—H15A110.9
C6—C9—H9C109.5C11—C15—H15A110.9
H9A—C9—H9C109.5C14—C15—H15B110.9
H9B—C9—H9C109.5C11—C15—H15B110.9
C8—C10—H10A109.5H15A—C15—H15B108.9
O2—S1—C1—C8−139.5 (2)C3—C2—C7—C63.7 (4)
C11—S1—C1—C8110.1 (3)C1—C2—C7—C6−177.7 (3)
O2—S1—C1—C240.8 (3)C3—C2—C7—O1−177.3 (2)
C11—S1—C1—C2−69.6 (3)C1—C2—C7—O11.3 (3)
C8—C1—C2—C7−1.7 (3)C2—C1—C8—O11.5 (3)
S1—C1—C2—C7178.1 (2)S1—C1—C8—O1−178.30 (18)
C8—C1—C2—C3176.6 (3)C2—C1—C8—C10−177.6 (3)
S1—C1—C2—C3−3.6 (5)S1—C1—C8—C102.6 (5)
C7—C2—C3—C4−1.9 (4)C7—O1—C8—C1−0.7 (3)
C1—C2—C3—C4−179.9 (3)C7—O1—C8—C10178.6 (2)
C2—C3—C4—C5−0.9 (4)O2—S1—C11—C12−177.07 (19)
C2—C3—C4—Br1178.6 (2)C1—S1—C11—C12−66.3 (2)
C3—C4—C5—C62.1 (4)O2—S1—C11—C1566.2 (2)
Br1—C4—C5—C6−177.4 (2)C1—S1—C11—C15177.0 (2)
C4—C5—C6—C7−0.4 (4)C15—C11—C12—C13−5.9 (3)
C4—C5—C6—C9−180.0 (2)S1—C11—C12—C13−124.4 (2)
C5—C6—C7—O1178.7 (2)C11—C12—C13—C1428.9 (3)
C9—C6—C7—O1−1.7 (4)C12—C13—C14—C15−41.2 (3)
C5—C6—C7—C2−2.5 (4)C13—C14—C15—C1137.0 (3)
C9—C6—C7—C2177.1 (3)C12—C11—C15—C14−19.3 (3)
C8—O1—C7—C6178.5 (2)S1—C11—C15—C14100.0 (2)
C8—O1—C7—C2−0.4 (3)
D—H···AD—HH···AD···AD—H···A
C5—H5···O2i0.952.603.465 (3)152.
C9—H9B···O2i0.982.553.489 (3)161.
C10—H10B···O1ii0.982.603.480 (3)149.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O2i0.952.603.465 (3)152
C9—H9B⋯O2i0.982.553.489 (3)161
C10—H10B⋯O1ii0.982.603.480 (3)149

Symmetry codes: (i) ; (ii) .

  8 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

6.  Antibacterial and antifungal activity of cicerfuran and related 2-arylbenzofurans and stilbenes.

Authors:  Shazia N Aslam; Philip C Stevenson; Tetsuo Kokubun; David R Hall
Journal:  Microbiol Res       Date:  2007-04-05       Impact factor: 5.415

7.  5-Bromo-3-cyclo-hexyl-sulfonyl-2,7-dimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-29

8.  5-Bromo-3-cyclo-hexyl-sulfinyl-2,7-dimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07
  8 in total

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