Literature DB >> 22346960

Propane-1,3-diaminium bis-(perchlorate)-18-crown-6 (1/2).

Min-Min Zhao1.   

Abstract

In the title compound, C(3)H(12)N(2) (2+)·2ClO(4) (-)·2C(12)H(24)O(6), the central C atom of the propane-1,3-diammonium cation is located on a twofold rotation axis and the two terminal -NH(3) groups insert into the crown rings through N-H⋯O hydrogen bonding, resulting in the formation of a 1:2 supra-molecular [(C(3)H(12)N(2))·(C(12)H(24)O(6))(2)](+) complex. The perchlorate anion links with the supra-molecular complex via weak C-H⋯O hydrogen bonding.

Entities:  

Year:  2012        PMID: 22346960      PMCID: PMC3275015          DOI: 10.1107/S1600536811056248

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the properties and structures of related compounds, see: Fu et al. (2007 ▶, 2008 ▶, 2009 ▶); Fu & Xiong (2008 ▶). For the ferroelectric properties of related amino derivatives, see: Fu et al. (2011a ▶,b ▶,c ▶).

Experimental

Crystal data

C3H12N2 2+·2ClO4 −·2C12H24O6 M = 803.67 Monoclinic, a = 22.984 (5) Å b = 9.0055 (18) Å c = 21.620 (4) Å β = 113.59 (3)° V = 4101.0 (17) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 298 K 0.10 × 0.03 × 0.03 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.910, T max = 1.000 16855 measured reflections 3606 independent reflections 2059 reflections with I > 2σ(I) R int = 0.086

Refinement

R[F 2 > 2σ(F 2)] = 0.085 wR(F 2) = 0.248 S = 1.07 3606 reflections 232 parameters H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.42 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811056248/xu5433sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811056248/xu5433Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H12N22+·2ClO4·2C12H24O6F(000) = 1720
Mr = 803.67Dx = 1.302 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3606 reflections
a = 22.984 (5) Åθ = 3.3–27.5°
b = 9.0055 (18) ŵ = 0.23 mm1
c = 21.620 (4) ÅT = 298 K
β = 113.59 (3)°Block, colorless
V = 4101.0 (17) Å30.10 × 0.03 × 0.03 mm
Z = 4
Rigaku Mercury2 diffractometer3606 independent reflections
Radiation source: fine-focus sealed tube2059 reflections with I > 2σ(I)
graphiteRint = 0.086
Detector resolution: 13.6612 pixels mm-1θmax = 25.0°, θmin = 3.3°
CCD profile fitting scansh = −27→27
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −10→10
Tmin = 0.910, Tmax = 1.000l = −25→25
16855 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.085Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.248H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.1136P)2 + 6.3277P] where P = (Fo2 + 2Fc2)/3
3606 reflections(Δ/σ)max < 0.001
232 parametersΔρmax = 0.65 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.07984 (6)0.10040 (17)0.43221 (7)0.0626 (5)
N10.10533 (15)0.4168 (4)0.23756 (18)0.0394 (9)
H1C0.13670.35500.24090.059*
H1D0.11950.48360.27060.059*
H1E0.09150.46280.19780.059*
C140.00000.4263 (7)0.25000.0401 (15)
H14A−0.01830.48880.21100.048*
C130.0522 (2)0.3310 (5)0.2433 (3)0.0489 (12)
H13A0.06930.26720.28200.059*
H13B0.03340.26910.20410.059*
O10.19599 (14)0.1670 (4)0.26636 (16)0.0522 (9)
O20.14880 (16)0.2723 (4)0.13018 (17)0.0610 (10)
O60.22044 (16)0.3852 (4)0.37058 (16)0.0600 (10)
O50.15115 (18)0.6523 (4)0.3449 (2)0.0699 (11)
O30.07323 (17)0.5386 (5)0.10111 (19)0.0694 (11)
O40.10201 (18)0.7507 (4)0.2076 (2)0.0748 (12)
C110.2347 (2)0.2291 (6)0.3837 (3)0.0613 (15)
H11A0.19880.17940.38630.074*
H11B0.27010.21740.42630.074*
C120.2501 (2)0.1626 (6)0.3288 (3)0.0593 (14)
H12A0.28460.21540.32460.071*
H12B0.26290.06120.33980.071*
C20.1526 (3)0.1189 (6)0.1466 (3)0.0683 (16)
H2A0.15800.06200.11170.082*
H2B0.11420.08710.15030.082*
C10.2077 (3)0.0951 (6)0.2127 (3)0.0634 (15)
H1A0.2155−0.00890.22230.076*
H1B0.24490.13810.21020.076*
C90.2026 (3)0.6201 (8)0.4103 (3)0.0796 (19)
H9A0.19560.67180.44550.096*
H9B0.24190.65420.40960.096*
C40.0927 (3)0.4672 (8)0.0535 (3)0.080 (2)
H4A0.13350.50540.05910.096*
H4B0.06310.48880.00840.096*
C30.0976 (3)0.3036 (7)0.0654 (3)0.0751 (18)
H3A0.05810.26730.06480.090*
H3B0.10560.25480.03000.090*
C60.0487 (3)0.7661 (7)0.1465 (4)0.086 (2)
H6A0.03860.86950.13760.104*
H6B0.01270.71650.14880.104*
C50.0641 (3)0.6996 (7)0.0914 (3)0.085 (2)
H5A0.03030.71850.04820.102*
H5B0.10220.74360.09170.102*
C80.1502 (4)0.8053 (7)0.3269 (4)0.087 (2)
H8A0.18820.82900.32060.104*
H8B0.14830.86740.36220.104*
C100.2064 (3)0.4562 (7)0.4218 (3)0.0716 (17)
H10A0.23880.43500.46550.086*
H10B0.16650.42090.42050.086*
C70.0943 (3)0.8322 (6)0.2623 (4)0.083 (2)
H7A0.05710.79670.26730.099*
H7B0.08890.93620.25180.099*
O90.0609 (3)0.0673 (6)0.3637 (2)0.1150 (18)
O80.0368 (2)0.0512 (6)0.4595 (3)0.1106 (18)
O100.0830 (5)0.2559 (8)0.4361 (5)0.231 (5)
O70.1380 (3)0.0480 (16)0.4675 (4)0.257 (6)
U11U22U33U12U13U23
Cl10.0603 (8)0.0785 (10)0.0606 (8)−0.0265 (7)0.0363 (7)−0.0224 (7)
N10.037 (2)0.037 (2)0.048 (2)0.0041 (16)0.0206 (17)0.0043 (17)
C140.038 (3)0.038 (4)0.049 (4)0.0000.021 (3)0.000
C130.040 (3)0.040 (3)0.071 (3)−0.002 (2)0.027 (2)0.001 (2)
O10.0417 (18)0.054 (2)0.060 (2)0.0123 (15)0.0193 (17)0.0100 (17)
O20.058 (2)0.062 (2)0.056 (2)−0.0107 (17)0.0150 (18)−0.0049 (18)
O60.067 (2)0.070 (2)0.045 (2)−0.0079 (18)0.0247 (18)0.0007 (18)
O50.076 (3)0.052 (2)0.091 (3)−0.0118 (19)0.044 (2)−0.015 (2)
O30.068 (2)0.074 (3)0.055 (2)−0.0096 (19)0.0132 (19)0.020 (2)
O40.057 (2)0.059 (2)0.104 (3)0.0210 (19)0.026 (2)0.017 (2)
C110.052 (3)0.065 (4)0.058 (3)−0.003 (3)0.014 (3)0.025 (3)
C120.043 (3)0.055 (3)0.070 (4)0.003 (2)0.013 (3)0.020 (3)
C20.074 (4)0.063 (4)0.079 (4)−0.008 (3)0.042 (3)−0.014 (3)
C10.071 (4)0.046 (3)0.089 (4)0.012 (3)0.049 (3)−0.002 (3)
C90.087 (4)0.101 (6)0.056 (4)−0.018 (4)0.034 (4)−0.025 (3)
C40.064 (4)0.103 (5)0.049 (3)−0.027 (4)−0.003 (3)0.016 (3)
C30.072 (4)0.095 (5)0.044 (3)−0.020 (3)0.009 (3)−0.013 (3)
C60.062 (4)0.066 (4)0.125 (6)0.008 (3)0.030 (4)0.041 (4)
C50.059 (4)0.076 (4)0.084 (5)−0.011 (3)−0.009 (3)0.053 (4)
C80.110 (5)0.052 (4)0.122 (6)−0.004 (4)0.071 (5)−0.033 (4)
C100.070 (4)0.093 (5)0.054 (3)−0.014 (3)0.027 (3)−0.005 (3)
C70.085 (4)0.043 (3)0.149 (7)0.018 (3)0.078 (5)0.002 (4)
O90.159 (5)0.123 (4)0.065 (3)0.033 (3)0.045 (3)0.005 (3)
O80.118 (4)0.112 (4)0.146 (4)−0.048 (3)0.100 (4)−0.035 (3)
O100.412 (14)0.111 (5)0.310 (10)−0.140 (7)0.292 (11)−0.112 (6)
O70.076 (4)0.533 (19)0.133 (6)0.024 (7)0.012 (4)0.140 (9)
Cl1—O71.332 (7)C12—H12A0.9599
Cl1—O91.399 (5)C12—H12B0.9600
Cl1—O101.403 (7)C2—C11.500 (8)
Cl1—O81.410 (4)C2—H2A0.9600
N1—C131.492 (5)C2—H2B0.9601
N1—H1C0.8900C1—H1A0.9599
N1—H1D0.8900C1—H1B0.9600
N1—H1E0.8900C9—C101.493 (8)
C14—C131.528 (5)C9—H9A0.9600
C14—C13i1.528 (5)C9—H9B0.9601
C14—H14A0.9600C4—C31.492 (8)
C13—H13A0.9600C4—H4A0.9599
C13—H13B0.9600C4—H4B0.9600
O1—C121.423 (6)C3—H3A0.9600
O1—C11.444 (6)C3—H3B0.9600
O2—C21.420 (6)C6—C51.496 (9)
O2—C31.452 (6)C6—H6A0.9601
O6—C101.422 (6)C6—H6B0.9600
O6—C111.445 (6)C5—H5A0.9600
O5—C81.430 (7)C5—H5B0.9600
O5—C91.462 (7)C8—C71.492 (9)
O3—C41.429 (8)C8—H8A0.9602
O3—C51.468 (7)C8—H8B0.9600
O4—C61.403 (7)C10—H10A0.9602
O4—C71.462 (7)C10—H10B0.9600
C11—C121.494 (7)C7—H7A0.9601
C11—H11A0.9600C7—H7B0.9599
C11—H11B0.9600
O7—Cl1—O9110.3 (5)H1A—C1—H1B108.3
O7—Cl1—O10107.6 (7)O5—C9—C10109.1 (5)
O9—Cl1—O10105.2 (5)O5—C9—H9A110.1
O7—Cl1—O8111.1 (4)C10—C9—H9A111.4
O9—Cl1—O8113.7 (3)O5—C9—H9B108.9
O10—Cl1—O8108.5 (4)C10—C9—H9B109.0
C13—N1—H1C109.5H9A—C9—H9B108.3
C13—N1—H1D109.5O3—C4—C3110.2 (5)
H1C—N1—H1D109.5O3—C4—H4A108.6
C13—N1—H1E109.5C3—C4—H4A109.2
H1C—N1—H1E109.5O3—C4—H4B110.0
H1D—N1—H1E109.5C3—C4—H4B110.5
C13—C14—C13i111.6 (5)H4A—C4—H4B108.3
C13—C14—H14A109.3O2—C3—C4109.5 (4)
C13i—C14—H14A109.2O2—C3—H3A110.1
N1—C13—C14114.6 (4)C4—C3—H3A109.1
N1—C13—H13A108.5O2—C3—H3B109.9
C14—C13—H13A108.5C4—C3—H3B110.0
N1—C13—H13B108.7H3A—C3—H3B108.3
C14—C13—H13B108.5O4—C6—C5108.3 (5)
H13A—C13—H13B107.8O4—C6—H6A109.6
C12—O1—C1112.1 (4)C5—C6—H6A110.2
C2—O2—C3112.0 (4)O4—C6—H6B110.6
C10—O6—C11112.8 (4)C5—C6—H6B109.8
C8—O5—C9111.8 (5)H6A—C6—H6B108.4
C4—O3—C5114.2 (5)O3—C5—C6110.3 (5)
C6—O4—C7111.7 (5)O3—C5—H5A109.2
O6—C11—C12109.9 (4)C6—C5—H5A110.2
O6—C11—H11A109.4O3—C5—H5B109.2
C12—C11—H11A110.0C6—C5—H5B109.5
O6—C11—H11B109.5H5A—C5—H5B108.3
C12—C11—H11B109.8O5—C8—C7108.9 (5)
H11A—C11—H11B108.2O5—C8—H8A109.8
O1—C12—C11110.4 (4)C7—C8—H8A108.7
O1—C12—H12A109.8O5—C8—H8B110.2
C11—C12—H12A110.1C7—C8—H8B110.6
O1—C12—H12B109.0H8A—C8—H8B108.6
C11—C12—H12B109.2O6—C10—C9109.4 (5)
H12A—C12—H12B108.2O6—C10—H10A110.4
O2—C2—C1108.7 (4)C9—C10—H10A109.4
O2—C2—H2A109.7O6—C10—H10B109.9
C1—C2—H2A110.3C9—C10—H10B109.3
O2—C2—H2B110.1H10A—C10—H10B108.5
C1—C2—H2B109.4O4—C7—C8109.8 (4)
H2A—C2—H2B108.6O4—C7—H7A109.0
O1—C1—C2110.1 (4)C8—C7—H7A108.1
O1—C1—H1A110.0O4—C7—H7B110.3
C2—C1—H1A111.0C8—C7—H7B111.2
O1—C1—H1B108.8H7A—C7—H7B108.3
C2—C1—H1B108.6
C13i—C14—C13—N1−179.1 (5)O3—C4—C3—O2−66.2 (6)
C10—O6—C11—C12−178.9 (4)C7—O4—C6—C5171.5 (5)
C1—O1—C12—C11−176.3 (4)C4—O3—C5—C6−175.6 (5)
O6—C11—C12—O1−64.8 (5)O4—C6—C5—O365.9 (6)
C3—O2—C2—C1178.0 (4)C9—O5—C8—C7−176.3 (5)
C12—O1—C1—C2−173.0 (4)C11—O6—C10—C9171.0 (4)
O2—C2—C1—O166.2 (6)O5—C9—C10—O661.6 (6)
C8—O5—C9—C10−172.4 (5)C6—O4—C7—C8176.6 (5)
C5—O3—C4—C3−177.2 (4)O5—C8—C7—O4−65.6 (6)
C2—O2—C3—C4175.4 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1C···O10.892.102.958 (4)161.
N1—H1E···O30.892.082.951 (5)167.
N1—H1D···O50.892.123.007 (5)177.
C10—H10B···O100.962.553.478 (13)161
C13—H13A···O90.962.583.470 (7)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1C⋯O10.892.102.958 (4)161
N1—H1E⋯O30.892.082.951 (5)167
N1—H1D⋯O50.892.123.007 (5)177
C10—H10B⋯O100.962.553.478 (13)161
C13—H13A⋯O90.962.583.470 (7)154
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  2 in total

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