Literature DB >> 22346921

4-[(3-Nitro-benzyl-idene)amino]-3-(pyridin-4-yl)-1H-1,2,4-triazole-5(4H)-thione.

Tian-Bao Li1, Ming-Sheng Yang, Bang-Shao Yin.   

Abstract

In the title compound, C(14)H(10)N(6)O(2)S, the dihedral angle between the pyridine and triazole rings is 3.21 (10)°. The mol-ecule is significantly twisted about the N(t)-N(b) (t = triazole and b = benzyl-idene) bond [C-N(t)-N(b)=C = 151.64 (17)°]. In the crystal, mol-ecules are linked by weak N-H⋯N hydrogen bonds, generating C(8) chains propagating in [10[Formula: see text]].

Entities:  

Year:  2012        PMID: 22346921      PMCID: PMC3274976          DOI: 10.1107/S1600536811054444

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For further details of the synthesis, see: Wang et al. (2010 ▶). For the biological activity of related compounds, see: Liu et al. (2011 ▶).

Experimental

Crystal data

C14H10N6O2S M = 326.34 Monoclinic, a = 3.7989 (13) Å b = 24.334 (9) Å c = 15.208 (6) Å β = 93.035 (5)° V = 1403.9 (9) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 113 K 0.20 × 0.18 × 0.10 mm

Data collection

Rigaku Saturn724 CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.952, T max = 0.975 14478 measured reflections 3317 independent reflections 2807 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.103 S = 1.07 3317 reflections 212 parameters 7 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.28 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) gllobal, I. DOI: 10.1107/S1600536811054444/hb6570sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811054444/hb6570Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811054444/hb6570Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10N6O2SF(000) = 672
Mr = 326.34Dx = 1.544 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 3.7989 (13) ÅCell parameters from 4572 reflections
b = 24.334 (9) Åθ = 1.6–28.0°
c = 15.208 (6) ŵ = 0.25 mm1
β = 93.035 (5)°T = 113 K
V = 1403.9 (9) Å3Prism, colorless
Z = 40.20 × 0.18 × 0.10 mm
Rigaku Saturn724 CCD diffractometer3317 independent reflections
Radiation source: rotating anode2807 reflections with I > 2σ(I)
multilayerRint = 0.056
Detector resolution: 14.22 pixels mm-1θmax = 27.9°, θmin = 1.6°
ω and φ scansh = −4→4
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −32→32
Tmin = 0.952, Tmax = 0.975l = −19→20
14478 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0391P)2 + 0.3217P] where P = (Fo2 + 2Fc2)/3
3317 reflections(Δ/σ)max = 0.002
212 parametersΔρmax = 0.30 e Å3
7 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.79238 (13)0.064958 (19)−0.05911 (3)0.01910 (14)
O11.3928 (4)0.08135 (6)0.49993 (9)0.0325 (4)
O21.2099 (6)0.14915 (7)0.41988 (12)0.0631 (7)
N10.0656 (4)0.30533 (6)0.24207 (10)0.0201 (4)
N20.3124 (4)0.20542 (6)−0.04085 (10)0.0176 (3)
N30.4482 (4)0.16171 (6)−0.08450 (10)0.0169 (3)
N40.5138 (4)0.14148 (6)0.05152 (9)0.0144 (3)
N50.6482 (4)0.12137 (6)0.13193 (10)0.0163 (3)
N61.2412 (5)0.10008 (7)0.43334 (11)0.0270 (4)
C10.2990 (5)0.21757 (8)0.20265 (12)0.0203 (4)
H10.39180.18300.22160.024*
C20.2005 (5)0.25621 (8)0.26337 (12)0.0221 (4)
H20.23080.24720.32410.027*
C30.0267 (5)0.31683 (8)0.15567 (12)0.0217 (4)
H3−0.07040.35150.13870.026*
C40.1197 (5)0.28122 (8)0.09009 (12)0.0198 (4)
H40.08840.29150.02990.024*
C50.2600 (5)0.23011 (7)0.11340 (12)0.0153 (4)
C60.3606 (5)0.19291 (7)0.04253 (11)0.0152 (4)
C70.5807 (5)0.12176 (7)−0.03166 (12)0.0152 (4)
C80.6464 (5)0.06903 (7)0.14201 (12)0.0160 (4)
H80.54810.04530.09760.019*
C90.8035 (5)0.04757 (8)0.22553 (11)0.0158 (4)
C100.8222 (5)−0.00903 (8)0.24024 (12)0.0176 (4)
H100.7268−0.03370.19680.021*
C110.9793 (5)−0.02948 (8)0.31800 (12)0.0205 (4)
H110.9920−0.06810.32710.025*
C121.1176 (5)0.00569 (8)0.38243 (12)0.0197 (4)
H121.2262−0.00810.43560.024*
C131.0928 (5)0.06162 (8)0.36685 (12)0.0189 (4)
C140.9407 (5)0.08343 (8)0.29021 (12)0.0186 (4)
H140.92970.12210.28160.022*
H3A0.461 (5)0.1634 (9)−0.1431 (7)0.025 (6)*
U11U22U33U12U13U23
S10.0194 (3)0.0182 (2)0.0198 (3)0.00006 (19)0.00267 (19)−0.00447 (18)
O10.0432 (10)0.0331 (8)0.0195 (8)0.0039 (7)−0.0132 (7)0.0013 (6)
O20.1174 (18)0.0204 (8)0.0460 (11)−0.0044 (10)−0.0482 (11)−0.0003 (7)
N10.0243 (10)0.0202 (8)0.0160 (8)0.0027 (7)0.0030 (7)−0.0009 (6)
N20.0213 (9)0.0165 (8)0.0150 (8)0.0000 (7)0.0015 (6)−0.0010 (6)
N30.0231 (9)0.0172 (8)0.0108 (7)−0.0001 (7)0.0029 (7)−0.0004 (6)
N40.0163 (8)0.0149 (7)0.0118 (7)0.0001 (6)−0.0009 (6)0.0009 (6)
N50.0183 (8)0.0190 (8)0.0114 (7)0.0024 (6)−0.0017 (6)0.0005 (6)
N60.0354 (11)0.0249 (9)0.0196 (9)0.0001 (8)−0.0082 (8)0.0013 (7)
C10.0266 (11)0.0173 (9)0.0171 (9)0.0038 (8)0.0016 (8)0.0023 (7)
C20.0312 (12)0.0219 (10)0.0135 (9)0.0044 (9)0.0030 (8)0.0008 (7)
C30.0241 (11)0.0206 (10)0.0204 (10)0.0050 (8)0.0003 (8)0.0006 (7)
C40.0239 (11)0.0194 (9)0.0162 (9)0.0024 (8)0.0014 (8)0.0022 (7)
C50.0135 (9)0.0164 (8)0.0158 (9)−0.0015 (7)0.0002 (7)−0.0003 (7)
C60.0155 (10)0.0153 (8)0.0144 (9)−0.0010 (7)−0.0011 (7)0.0008 (7)
C70.0132 (9)0.0184 (9)0.0140 (9)−0.0054 (7)0.0012 (7)−0.0020 (7)
C80.0144 (10)0.0180 (9)0.0155 (9)−0.0003 (7)0.0006 (7)−0.0003 (7)
C90.0143 (10)0.0187 (9)0.0146 (9)0.0008 (7)0.0020 (7)0.0010 (7)
C100.0168 (10)0.0182 (9)0.0180 (9)0.0014 (8)0.0037 (7)−0.0021 (7)
C110.0224 (11)0.0171 (9)0.0221 (10)0.0029 (8)0.0027 (8)0.0023 (7)
C120.0177 (10)0.0247 (10)0.0166 (9)0.0027 (8)0.0001 (8)0.0056 (7)
C130.0188 (10)0.0216 (9)0.0161 (9)0.0008 (8)−0.0010 (8)−0.0007 (7)
C140.0213 (11)0.0170 (9)0.0174 (9)0.0006 (8)−0.0001 (8)0.0012 (7)
S1—C71.6634 (19)C3—C41.381 (3)
O1—N61.226 (2)C3—H30.9500
O2—N61.216 (2)C4—C51.392 (2)
N1—C21.334 (2)C4—H40.9500
N1—C31.344 (2)C5—C61.473 (2)
N2—C61.308 (2)C8—C91.470 (2)
N2—N31.369 (2)C8—H80.9500
N3—C71.342 (2)C9—C141.395 (2)
N3—H3A0.896 (9)C9—C101.396 (3)
N4—C61.384 (2)C10—C111.388 (3)
N4—N51.389 (2)C10—H100.9500
N4—C71.389 (2)C11—C121.383 (3)
N5—C81.283 (2)C11—H110.9500
N6—C131.468 (2)C12—C131.384 (3)
C1—C21.383 (3)C12—H120.9500
C1—C51.391 (3)C13—C141.379 (3)
C1—H10.9500C14—H140.9500
C2—H20.9500
C2—N1—C3116.43 (16)N2—C6—N4110.06 (16)
C6—N2—N3104.61 (15)N2—C6—C5122.55 (16)
C7—N3—N2114.30 (15)N4—C6—C5127.40 (16)
C7—N3—H3A126.1 (14)N3—C7—N4102.37 (15)
N2—N3—H3A119.3 (13)N3—C7—S1128.51 (14)
C6—N4—N5122.59 (14)N4—C7—S1129.03 (14)
C6—N4—C7108.58 (15)N5—C8—C9116.82 (16)
N5—N4—C7127.12 (15)N5—C8—H8121.6
C8—N5—N4116.80 (15)C9—C8—H8121.6
O2—N6—O1122.78 (18)C14—C9—C10119.34 (17)
O2—N6—C13118.63 (16)C14—C9—C8120.42 (17)
O1—N6—C13118.58 (17)C10—C9—C8120.23 (16)
C2—C1—C5118.91 (18)C11—C10—C9120.39 (17)
C2—C1—H1120.5C11—C10—H10119.8
C5—C1—H1120.5C9—C10—H10119.8
N1—C2—C1124.13 (18)C12—C11—C10120.77 (17)
N1—C2—H2117.9C12—C11—H11119.6
C1—C2—H2117.9C10—C11—H11119.6
N1—C3—C4123.79 (18)C11—C12—C13117.85 (17)
N1—C3—H3118.1C11—C12—H12121.1
C4—C3—H3118.1C13—C12—H12121.1
C3—C4—C5119.07 (17)C14—C13—C12123.01 (18)
C3—C4—H4120.5C14—C13—N6117.72 (17)
C5—C4—H4120.5C12—C13—N6119.25 (16)
C1—C5—C4117.65 (17)C13—C14—C9118.64 (17)
C1—C5—C6124.09 (17)C13—C14—H14120.7
C4—C5—C6118.25 (16)C9—C14—H14120.7
C6—N2—N3—C70.1 (2)N2—N3—C7—S1−175.14 (13)
C6—N4—N5—C8151.64 (17)C6—N4—C7—N3−2.68 (19)
C7—N4—N5—C8−44.9 (2)N5—N4—C7—N3−167.98 (16)
C3—N1—C2—C1−0.1 (3)C6—N4—C7—S1174.07 (14)
C5—C1—C2—N10.6 (3)N5—N4—C7—S18.8 (3)
C2—N1—C3—C4−0.4 (3)N4—N5—C8—C9177.27 (15)
N1—C3—C4—C50.5 (3)N5—C8—C9—C141.1 (3)
C2—C1—C5—C4−0.5 (3)N5—C8—C9—C10−177.83 (17)
C2—C1—C5—C6178.91 (18)C14—C9—C10—C11−0.7 (3)
C3—C4—C5—C10.0 (3)C8—C9—C10—C11178.18 (17)
C3—C4—C5—C6−179.44 (17)C9—C10—C11—C120.5 (3)
N3—N2—C6—N4−1.9 (2)C10—C11—C12—C130.2 (3)
N3—N2—C6—C5178.17 (16)C11—C12—C13—C14−0.7 (3)
N5—N4—C6—N2169.09 (15)C11—C12—C13—N6−179.16 (17)
C7—N4—C6—N23.0 (2)O2—N6—C13—C143.3 (3)
N5—N4—C6—C5−10.9 (3)O1—N6—C13—C14−176.44 (19)
C7—N4—C6—C5−177.05 (17)O2—N6—C13—C12−178.2 (2)
C1—C5—C6—N2178.28 (18)O1—N6—C13—C122.1 (3)
C4—C5—C6—N2−2.3 (3)C12—C13—C14—C90.4 (3)
C1—C5—C6—N4−1.7 (3)N6—C13—C14—C9178.92 (17)
C4—C5—C6—N4177.75 (18)C10—C9—C14—C130.3 (3)
N2—N3—C7—N41.6 (2)C8—C9—C14—C13−178.61 (17)
D—H···AD—HH···AD···AD—H···A
N3—H3A···N1i0.90 (1)1.96 (1)2.815 (2)158.(2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯N1i0.90 (1)1.96 (1)2.815 (2)158 (2)

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and biological activity of some novel trifluoromethyl-substituted 1,2,4-triazole and bis(1,2,4-triazole) Mannich bases containing piperazine rings.

Authors:  Bao-Lei Wang; Yan-Xia Shi; Yi Ma; Xing-Hai Liu; Yong-Hong Li; Hai-Bin Song; Bao-Ju Li; Zheng-Ming Li
Journal:  J Agric Food Chem       Date:  2010-05-12       Impact factor: 5.279

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.