| Literature DB >> 22346916 |
P A Suchetan, Sabine Foro, B Thimme Gowda.
Abstract
In the title compound, C(13)H(9)ClN(2)O(5)S, the dihedral angle between the two rings is 71.2 (1)°. The crystal structure features inversion dimers linked by pairs of N-H⋯O(S) hydrogen bonds.Entities:
Year: 2012 PMID: 22346916 PMCID: PMC3274971 DOI: 10.1107/S1600536811054882
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H9ClN2O5S | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 2278 reflections |
| θ = 2.5–27.7° | |
| µ = 0.43 mm−1 | |
| Prism, colourless | |
| 0.48 × 0.40 × 0.20 mm |
| Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 2958 independent reflections |
| Radiation source: fine-focus sealed tube | 2105 reflections with |
| graphite | |
| Rotation method data acquisition using ω scans | θmax = 26.4°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 7231 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2958 reflections | (Δ/σ)max < 0.001 |
| 202 parameters | Δρmax = 0.23 e Å−3 |
| 1 restraint | Δρmin = −0.29 e Å−3 |
| Experimental. CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.08013 (14) | 0.23007 (14) | 0.52361 (9) | 0.0378 (4) | |
| C2 | 0.00268 (15) | 0.21928 (14) | 0.57758 (10) | 0.0414 (4) | |
| C3 | −0.01230 (19) | 0.12473 (16) | 0.61266 (12) | 0.0579 (6) | |
| H3 | −0.0641 | 0.1194 | 0.6487 | 0.069* | |
| C4 | 0.0493 (2) | 0.03845 (17) | 0.59424 (14) | 0.0698 (7) | |
| H4 | 0.0393 | −0.0256 | 0.6178 | 0.084* | |
| C5 | 0.12540 (19) | 0.04664 (18) | 0.54136 (14) | 0.0679 (7) | |
| H5 | 0.1667 | −0.0122 | 0.5288 | 0.081* | |
| C6 | 0.14160 (17) | 0.14199 (16) | 0.50620 (12) | 0.0523 (5) | |
| H6 | 0.1942 | 0.1467 | 0.4706 | 0.063* | |
| C7 | −0.00470 (16) | 0.32241 (14) | 0.36776 (9) | 0.0409 (4) | |
| C8 | −0.08836 (15) | 0.37301 (15) | 0.32102 (9) | 0.0396 (4) | |
| C9 | −0.18466 (17) | 0.32223 (16) | 0.30359 (11) | 0.0504 (5) | |
| C10 | −0.2584 (2) | 0.3683 (2) | 0.25752 (13) | 0.0705 (7) | |
| H10 | −0.3228 | 0.3334 | 0.2459 | 0.085* | |
| C11 | −0.2364 (2) | 0.4656 (2) | 0.22895 (13) | 0.0741 (7) | |
| H11 | −0.2859 | 0.4962 | 0.1976 | 0.089* | |
| C12 | −0.1425 (2) | 0.51844 (19) | 0.24594 (11) | 0.0638 (7) | |
| H12 | −0.1283 | 0.5846 | 0.2263 | 0.077* | |
| C13 | −0.06890 (18) | 0.47285 (16) | 0.29256 (10) | 0.0496 (5) | |
| H13 | −0.0058 | 0.5092 | 0.3050 | 0.060* | |
| N1 | 0.02375 (13) | 0.38393 (11) | 0.42595 (8) | 0.0391 (4) | |
| H1N | −0.0179 (15) | 0.4312 (12) | 0.4385 (10) | 0.047* | |
| N2 | −0.06860 (14) | 0.30632 (13) | 0.60028 (10) | 0.0515 (4) | |
| O1 | 0.21732 (10) | 0.33502 (11) | 0.44685 (8) | 0.0546 (4) | |
| O2 | 0.11350 (10) | 0.43253 (10) | 0.53775 (7) | 0.0425 (3) | |
| O3 | 0.03763 (13) | 0.23796 (11) | 0.35641 (8) | 0.0616 (4) | |
| O4 | −0.10433 (11) | 0.36567 (12) | 0.55488 (9) | 0.0617 (4) | |
| O5 | −0.08870 (17) | 0.31359 (14) | 0.66363 (9) | 0.0915 (6) | |
| Cl1 | −0.21604 (5) | 0.20111 (5) | 0.34182 (4) | 0.0802 (2) | |
| S1 | 0.11830 (4) | 0.35192 (4) | 0.48410 (2) | 0.03738 (15) |
| C1 | 0.0299 (9) | 0.0363 (9) | 0.0473 (11) | 0.0011 (8) | −0.0029 (8) | 0.0011 (8) |
| C2 | 0.0403 (10) | 0.0352 (9) | 0.0487 (11) | 0.0010 (8) | 0.0007 (9) | 0.0025 (8) |
| C3 | 0.0635 (14) | 0.0468 (12) | 0.0634 (13) | −0.0006 (11) | 0.0106 (11) | 0.0138 (10) |
| C4 | 0.0751 (17) | 0.0445 (12) | 0.0897 (19) | 0.0078 (12) | 0.0053 (15) | 0.0198 (12) |
| C5 | 0.0591 (14) | 0.0412 (12) | 0.103 (2) | 0.0199 (11) | 0.0002 (14) | 0.0047 (12) |
| C6 | 0.0400 (11) | 0.0453 (11) | 0.0716 (14) | 0.0073 (9) | 0.0082 (10) | −0.0014 (10) |
| C7 | 0.0458 (11) | 0.0393 (10) | 0.0377 (10) | −0.0012 (9) | 0.0036 (9) | −0.0050 (8) |
| C8 | 0.0442 (10) | 0.0427 (10) | 0.0319 (9) | 0.0040 (9) | 0.0023 (8) | −0.0100 (8) |
| C9 | 0.0492 (12) | 0.0554 (12) | 0.0467 (11) | −0.0016 (10) | 0.0015 (10) | −0.0117 (10) |
| C10 | 0.0534 (14) | 0.0891 (18) | 0.0689 (14) | 0.0072 (14) | −0.0158 (12) | −0.0157 (15) |
| C11 | 0.0748 (18) | 0.0890 (19) | 0.0585 (14) | 0.0365 (16) | −0.0122 (14) | −0.0051 (13) |
| C12 | 0.0891 (19) | 0.0533 (13) | 0.0490 (12) | 0.0234 (13) | 0.0107 (13) | 0.0015 (11) |
| C13 | 0.0622 (13) | 0.0445 (11) | 0.0420 (10) | 0.0046 (10) | 0.0013 (10) | −0.0058 (9) |
| N1 | 0.0427 (9) | 0.0377 (8) | 0.0369 (8) | 0.0057 (7) | −0.0033 (7) | −0.0040 (7) |
| N2 | 0.0510 (10) | 0.0386 (9) | 0.0648 (12) | −0.0051 (9) | 0.0179 (9) | −0.0005 (8) |
| O1 | 0.0371 (8) | 0.0643 (9) | 0.0626 (9) | −0.0019 (7) | 0.0130 (7) | 0.0056 (7) |
| O2 | 0.0455 (7) | 0.0375 (7) | 0.0444 (7) | −0.0043 (6) | −0.0091 (6) | −0.0018 (5) |
| O3 | 0.0694 (10) | 0.0515 (9) | 0.0638 (10) | 0.0196 (8) | −0.0084 (8) | −0.0189 (7) |
| O4 | 0.0478 (9) | 0.0516 (9) | 0.0857 (11) | 0.0121 (7) | 0.0126 (8) | 0.0112 (9) |
| O5 | 0.1402 (18) | 0.0662 (11) | 0.0681 (12) | 0.0066 (11) | 0.0497 (12) | −0.0041 (9) |
| Cl1 | 0.0745 (5) | 0.0688 (4) | 0.0972 (5) | −0.0255 (3) | 0.0024 (4) | −0.0002 (3) |
| S1 | 0.0315 (2) | 0.0384 (3) | 0.0423 (3) | −0.0029 (2) | 0.0002 (2) | 0.0017 (2) |
| C1—C6 | 1.384 (3) | C8—C13 | 1.391 (3) |
| C1—C2 | 1.394 (2) | C9—C10 | 1.379 (3) |
| C1—S1 | 1.7721 (18) | C9—Cl1 | 1.734 (2) |
| C2—C3 | 1.376 (3) | C10—C11 | 1.369 (3) |
| C2—N2 | 1.468 (2) | C10—H10 | 0.9300 |
| C3—C4 | 1.371 (3) | C11—C12 | 1.369 (3) |
| C3—H3 | 0.9300 | C11—H11 | 0.9300 |
| C4—C5 | 1.365 (3) | C12—C13 | 1.382 (3) |
| C4—H4 | 0.9300 | C12—H12 | 0.9300 |
| C5—C6 | 1.388 (3) | C13—H13 | 0.9300 |
| C5—H5 | 0.9300 | N1—S1 | 1.6420 (16) |
| C6—H6 | 0.9300 | N1—H1N | 0.820 (14) |
| C7—O3 | 1.206 (2) | N2—O5 | 1.216 (2) |
| C7—N1 | 1.384 (2) | N2—O4 | 1.216 (2) |
| C7—C8 | 1.493 (3) | O1—S1 | 1.4171 (13) |
| C8—C9 | 1.384 (3) | O2—S1 | 1.4327 (13) |
| C6—C1—C2 | 117.61 (17) | C8—C9—Cl1 | 120.13 (16) |
| C6—C1—S1 | 117.21 (15) | C11—C10—C9 | 119.6 (2) |
| C2—C1—S1 | 124.62 (14) | C11—C10—H10 | 120.2 |
| C3—C2—C1 | 121.49 (18) | C9—C10—H10 | 120.2 |
| C3—C2—N2 | 115.66 (17) | C10—C11—C12 | 120.9 (2) |
| C1—C2—N2 | 122.85 (16) | C10—C11—H11 | 119.5 |
| C4—C3—C2 | 119.8 (2) | C12—C11—H11 | 119.5 |
| C4—C3—H3 | 120.1 | C11—C12—C13 | 119.5 (2) |
| C2—C3—H3 | 120.1 | C11—C12—H12 | 120.2 |
| C5—C4—C3 | 120.0 (2) | C13—C12—H12 | 120.2 |
| C5—C4—H4 | 120.0 | C12—C13—C8 | 120.6 (2) |
| C3—C4—H4 | 120.0 | C12—C13—H13 | 119.7 |
| C4—C5—C6 | 120.5 (2) | C8—C13—H13 | 119.7 |
| C4—C5—H5 | 119.7 | C7—N1—S1 | 124.22 (13) |
| C6—C5—H5 | 119.7 | C7—N1—H1N | 118.5 (14) |
| C1—C6—C5 | 120.6 (2) | S1—N1—H1N | 115.4 (14) |
| C1—C6—H6 | 119.7 | O5—N2—O4 | 124.28 (19) |
| C5—C6—H6 | 119.7 | O5—N2—C2 | 117.40 (18) |
| O3—C7—N1 | 121.86 (18) | O4—N2—C2 | 118.31 (17) |
| O3—C7—C8 | 124.88 (17) | O1—S1—O2 | 119.21 (8) |
| N1—C7—C8 | 113.24 (15) | O1—S1—N1 | 108.40 (8) |
| C9—C8—C13 | 118.50 (19) | O2—S1—N1 | 105.14 (7) |
| C9—C8—C7 | 121.76 (18) | O1—S1—C1 | 107.53 (8) |
| C13—C8—C7 | 119.73 (17) | O2—S1—C1 | 108.33 (8) |
| C10—C9—C8 | 120.8 (2) | N1—S1—C1 | 107.76 (8) |
| C10—C9—Cl1 | 119.05 (18) | ||
| C6—C1—C2—C3 | 0.2 (3) | C9—C10—C11—C12 | −0.6 (4) |
| S1—C1—C2—C3 | −170.90 (16) | C10—C11—C12—C13 | 0.1 (3) |
| C6—C1—C2—N2 | −179.14 (18) | C11—C12—C13—C8 | 1.4 (3) |
| S1—C1—C2—N2 | 9.8 (3) | C9—C8—C13—C12 | −2.3 (3) |
| C1—C2—C3—C4 | −0.5 (3) | C7—C8—C13—C12 | 176.28 (17) |
| N2—C2—C3—C4 | 178.9 (2) | O3—C7—N1—S1 | 1.6 (3) |
| C2—C3—C4—C5 | 0.1 (4) | C8—C7—N1—S1 | −176.52 (12) |
| C3—C4—C5—C6 | 0.4 (4) | C3—C2—N2—O5 | 38.4 (3) |
| C2—C1—C6—C5 | 0.4 (3) | C1—C2—N2—O5 | −142.2 (2) |
| S1—C1—C6—C5 | 172.14 (18) | C3—C2—N2—O4 | −141.0 (2) |
| C4—C5—C6—C1 | −0.7 (4) | C1—C2—N2—O4 | 38.4 (3) |
| O3—C7—C8—C9 | 56.4 (3) | C7—N1—S1—O1 | 56.41 (17) |
| N1—C7—C8—C9 | −125.56 (19) | C7—N1—S1—O2 | −175.07 (15) |
| O3—C7—C8—C13 | −122.1 (2) | C7—N1—S1—C1 | −59.68 (17) |
| N1—C7—C8—C13 | 56.0 (2) | C6—C1—S1—O1 | −6.83 (18) |
| C13—C8—C9—C10 | 1.7 (3) | C2—C1—S1—O1 | 164.30 (16) |
| C7—C8—C9—C10 | −176.79 (18) | C6—C1—S1—O2 | −136.91 (15) |
| C13—C8—C9—Cl1 | −176.28 (14) | C2—C1—S1—O2 | 34.23 (18) |
| C7—C8—C9—Cl1 | 5.2 (2) | C6—C1—S1—N1 | 109.83 (16) |
| C8—C9—C10—C11 | −0.3 (3) | C2—C1—S1—N1 | −79.04 (17) |
| Cl1—C9—C10—C11 | 177.70 (18) |
| H··· | ||||
| N1—H1N···O2i | 0.82 (1) | 2.13 (1) | 2.9465 (19) | 172.(2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.82 (1) | 2.13 (1) | 2.9465 (19) | 172 (2) |
Symmetry code: (i) .