Literature DB >> 22346861

Bis[(1S,1'S)-1,1'-(4-amino-4H-1,2,4-triazole-3,5-di-yl)diethanol-κN]bis-(nitrato-κO)zinc.

Xun-Gao Liu, Liang Shen, Qi-Suo Cai, Ma Luo.   

Abstract

In the title homochiral mononuclear compound, [Zn(NO(3))(2)(C(6)H(12)N(4)O(2))(2)], the Zn(II) atom is located on a twofold rotation axis and coordinated by two N atoms from two ligands and two O atoms from two NO(3) (-) anions, adopting a distorted tetra-hedral coordination geometry. The compound is enanti-omerically pure and corresponds to the S diastereoisomer, with the optical activity originating from the chiral ligand. In the crystal, mol-ecules are connected into three-dimensional supra-molecular networks through O-H⋯O, O-H⋯N and N-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22346861      PMCID: PMC3274914          DOI: 10.1107/S1600536812001754

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For 4-amino-4H-1,2,4-triazole transition metal complexes, see: Zhai et al. (2006 ▶); Yi et al. (2004 ▶). For the non-linear optical properties of chiral coordination compounds, see: Evans & Lin (2002 ▶). For uses of chiral coordination compounds, see: Hang et al. (2011 ▶); Lin (2010 ▶).

Experimental

Crystal data

[Zn(NO3)2(C6H12N4O2)2] M = 533.78 Tetragonal, a = 12.1252 (7) Å c = 14.6108 (17) Å V = 2148.1 (3) Å3 Z = 4 Mo Kα radiation μ = 1.22 mm−1 T = 298 K 0.36 × 0.18 × 0.12 mm

Data collection

Bruker APEX DUO diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.767, T max = 0.862 7446 measured reflections 2463 independent reflections 2154 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.088 S = 1.05 2463 reflections 154 parameters 378 restraints H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.23 e Å−3 Absolute structure: Flack (1983 ▶), 993 Friedel pairs Flack parameter: −0.022 (15) Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT-Plus (Bruker, 2000 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and DIAMOND (Brandenburg & Putz, 2007 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812001754/ff2051sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812001754/ff2051Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(NO3)2(C6H12N4O2)2]Dx = 1.651 Mg m3
Mr = 533.78Mo Kα radiation, λ = 0.71073 Å
Tetragonal, P41212Cell parameters from 7446 reflections
Hall symbol: P 4abw 2nwθ = 1.7–27.5°
a = 12.1252 (7) ŵ = 1.22 mm1
c = 14.6108 (17) ÅT = 298 K
V = 2148.1 (3) Å3Needle, colourless
Z = 40.36 × 0.18 × 0.12 mm
F(000) = 1104
Bruker APEX DUO diffractometer2463 independent reflections
Radiation source: fine-focus sealed tube2154 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 27.5°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −15→9
Tmin = 0.767, Tmax = 0.862k = −15→13
7446 measured reflectionsl = −18→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.088w = 1/[σ2(Fo2) + (0.0455P)2 + 0.2512P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
2463 reflectionsΔρmax = 0.32 e Å3
154 parametersΔρmin = −0.23 e Å3
378 restraintsAbsolute structure: Flack (1983), 993 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.022 (15)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.92340 (3)0.92340 (3)1.00000.03222 (13)
O10.72436 (18)0.90461 (18)0.95521 (12)0.0417 (5)
H10.70210.84930.98170.063*
O21.13628 (15)0.75723 (17)0.67187 (13)0.0336 (4)
H21.14790.82350.67770.050*
O31.09002 (17)0.89583 (19)1.02136 (13)0.0464 (5)
O41.0802 (3)1.0273 (3)1.1173 (3)0.1176 (14)
O51.2371 (2)0.9742 (3)1.0727 (2)0.0758 (9)
N10.91797 (19)0.85483 (18)0.87379 (13)0.0285 (5)
N21.00505 (19)0.81575 (19)0.82025 (13)0.0279 (5)
N30.84957 (17)0.80180 (17)0.74473 (15)0.0271 (4)
N40.7738 (2)0.7823 (2)0.67330 (16)0.0427 (6)
H4B0.79280.72080.64400.064*
H4C0.77530.83880.63450.064*
N51.1372 (2)0.9678 (2)1.07029 (17)0.0417 (6)
C10.8266 (2)0.8474 (2)0.82697 (16)0.0273 (5)
C20.9608 (2)0.7841 (2)0.74215 (16)0.0262 (5)
C30.7171 (2)0.8883 (2)0.85876 (17)0.0332 (6)
H30.65950.83430.84460.040*
C40.6903 (3)0.9988 (3)0.8141 (2)0.0467 (8)
H4D0.62161.02610.83770.070*
H4E0.68440.98920.74900.070*
H4F0.74791.05070.82740.070*
C51.0219 (2)0.7390 (2)0.66148 (17)0.0299 (6)
H50.99680.77760.60630.036*
C61.0044 (3)0.6164 (3)0.6482 (2)0.0460 (8)
H6A1.03890.59340.59230.069*
H6B0.92680.60110.64520.069*
H6C1.03630.57700.69870.069*
U11U22U33U12U13U23
Zn10.03548 (17)0.03548 (17)0.02569 (18)0.0024 (2)0.00483 (13)−0.00483 (13)
O10.0449 (12)0.0468 (14)0.0334 (9)−0.0032 (10)0.0117 (9)0.0021 (9)
O20.0277 (10)0.0310 (11)0.0420 (9)0.0005 (8)0.0038 (8)−0.0056 (9)
O30.0380 (12)0.0514 (13)0.0497 (10)0.0025 (9)−0.0045 (9)−0.0172 (9)
O40.0629 (19)0.112 (3)0.178 (3)0.0013 (19)−0.005 (2)−0.105 (3)
O50.0356 (15)0.102 (2)0.0901 (18)0.0029 (14)−0.0133 (13)−0.0283 (17)
N10.0269 (11)0.0310 (11)0.0277 (9)0.0003 (10)0.0016 (9)−0.0025 (8)
N20.0260 (11)0.0307 (11)0.0269 (9)0.0038 (9)−0.0002 (8)−0.0031 (8)
N30.0242 (10)0.0296 (10)0.0275 (8)−0.0036 (8)−0.0028 (9)−0.0012 (9)
N40.0409 (14)0.0495 (16)0.0378 (10)−0.0041 (11)−0.0161 (11)−0.0046 (12)
N50.0369 (15)0.0375 (14)0.0508 (13)0.0048 (11)−0.0053 (11)−0.0062 (12)
C10.0282 (13)0.0250 (13)0.0288 (10)−0.0015 (10)0.0020 (10)0.0035 (10)
C20.0265 (11)0.0248 (12)0.0272 (10)−0.0010 (9)−0.0026 (10)0.0020 (10)
C30.0265 (14)0.0394 (15)0.0336 (11)−0.0004 (11)0.0022 (10)0.0016 (11)
C40.0406 (18)0.0481 (19)0.0515 (16)0.0162 (15)0.0033 (14)0.0044 (15)
C50.0278 (13)0.0339 (14)0.0281 (10)0.0028 (11)−0.0015 (10)−0.0028 (10)
C60.0423 (18)0.0410 (18)0.0546 (17)−0.0048 (15)0.0031 (15)−0.0171 (14)
Zn1—N12.0239 (19)N3—N41.410 (3)
Zn1—N1i2.0239 (19)N4—H4B0.8900
Zn1—O32.071 (2)N4—H4C0.8900
Zn1—O3i2.071 (2)C1—C31.492 (4)
O1—C31.426 (3)C2—C51.496 (4)
O1—H10.8200C3—C41.525 (4)
O2—C51.412 (3)C3—H30.9800
O2—H20.8200C4—H4D0.9600
O3—N51.265 (3)C4—H4E0.9600
O4—N51.212 (4)C4—H4F0.9600
O5—N51.215 (4)C5—C61.514 (4)
N1—C11.305 (3)C5—H50.9800
N1—N21.397 (3)C6—H6A0.9600
N2—C21.318 (3)C6—H6B0.9600
N3—C11.352 (3)C6—H6C0.9600
N3—C21.366 (3)
N1—Zn1—N1i143.46 (13)N2—C2—C5125.9 (2)
N1—Zn1—O395.90 (8)N3—C2—C5124.6 (2)
N1i—Zn1—O3104.96 (8)O1—C3—C1107.4 (2)
N1—Zn1—O3i104.96 (8)O1—C3—C4108.4 (2)
N1i—Zn1—O3i95.90 (8)C1—C3—C4110.4 (2)
O3—Zn1—O3i109.73 (13)O1—C3—H3110.2
C3—O1—H1109.5C1—C3—H3110.2
C5—O2—H2109.5C4—C3—H3110.2
N5—O3—Zn1114.52 (17)C3—C4—H4D109.5
C1—N1—N2108.94 (19)C3—C4—H4E109.5
C1—N1—Zn1122.26 (18)H4D—C4—H4E109.5
N2—N1—Zn1128.68 (16)C3—C4—H4F109.5
C2—N2—N1106.0 (2)H4D—C4—H4F109.5
C1—N3—C2107.0 (2)H4E—C4—H4F109.5
C1—N3—N4126.3 (2)O2—C5—C2110.2 (2)
C2—N3—N4126.6 (2)O2—C5—C6107.8 (2)
N3—N4—H4B109.2C2—C5—C6113.0 (2)
N3—N4—H4C109.2O2—C5—H5108.6
H4B—N4—H4C109.5C2—C5—H5108.6
O4—N5—O5120.9 (3)C6—C5—H5108.6
O4—N5—O3118.2 (3)C5—C6—H6A109.5
O5—N5—O3120.8 (3)C5—C6—H6B109.5
N1—C1—N3108.6 (2)H6A—C6—H6B109.5
N1—C1—C3124.7 (2)C5—C6—H6C109.5
N3—C1—C3126.6 (2)H6A—C6—H6C109.5
N2—C2—N3109.4 (2)H6B—C6—H6C109.5
D—H···AD—HH···AD···AD—H···A
O1—H1···O2ii0.822.072.867 (3)163
N4—H4B···O5ii0.892.513.142 (5)129
O2—H2···N2iii0.822.132.943 (3)174
N4—H4C···O4iv0.892.403.022 (4)127
Table 1

Selected geometric parameters (Å, °)

Zn1—N12.0239 (19)
Zn1—O32.071 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2ii0.822.072.867 (3)163
N4—H4B⋯O5ii0.892.513.142 (5)129
O2—H2⋯N2iii0.822.132.943 (3)174
N4—H4C⋯O4iv0.892.403.022 (4)127

Symmetry codes: (ii) ; (iii) ; (iv) .

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