| Literature DB >> 22346848 |
Cheng-Fang Qiao1, Chun-Sheng Zhou.
Abstract
The asymmetric unit of the title compound, [Mg(H(2)O)(6)](C(8)H(5)N(8))(2)·4H(2)O, contains one half of the centrosymmetric dication, one anion and two water mol-ecules. The Mg(II) ion is coordinated by six water mol-ecules in a slightly distorted octa-hedral geometry. In the anion, the two five-membered heterocycles are twisted from the central benzene ring by 4.34 (11) and 3.20 (10)°. In the crystal, O-H⋯N, O-H⋯O and N-H⋯O hydrogen bonds generate a three-dimensional network.Entities:
Year: 2012 PMID: 22346848 PMCID: PMC3274901 DOI: 10.1107/S1600536812001250
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mg(H2O)6](C8H5N8)2·4H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2462 reflections |
| θ = 3.0–26.7° | |
| µ = 0.14 mm−1 | |
| β = 102.199 (2)° | Block, colourless |
| 0.31 × 0.24 × 0.09 mm | |
| Bruker APEXII CCD diffractometer | 2496 independent reflections |
| Radiation source: fine-focus sealed tube | 2033 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 6895 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2496 reflections | (Δ/σ)max < 0.001 |
| 196 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.46 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mg1 | 0.5000 | 0.0000 | 0.5000 | 0.0304 (3) | |
| C1 | 0.7904 (3) | 0.15136 (12) | −0.09794 (16) | 0.0298 (4) | |
| C2 | 0.8281 (3) | 0.10454 (12) | 0.00838 (16) | 0.0297 (4) | |
| C3 | 0.9335 (3) | 0.14064 (13) | 0.10478 (18) | 0.0403 (5) | |
| H3 | 0.9753 | 0.1952 | 0.1023 | 0.048* | |
| C4 | 0.9768 (4) | 0.09637 (14) | 0.20399 (19) | 0.0481 (6) | |
| H4 | 1.0476 | 0.1211 | 0.2679 | 0.058* | |
| C5 | 0.7649 (3) | 0.02305 (12) | 0.01326 (16) | 0.0307 (4) | |
| H5 | 0.6933 | −0.0016 | −0.0505 | 0.037* | |
| C6 | 0.9152 (3) | 0.01543 (14) | 0.20876 (18) | 0.0429 (5) | |
| H6 | 0.9451 | −0.0143 | 0.2757 | 0.051* | |
| C7 | 0.8087 (3) | −0.02159 (12) | 0.11354 (16) | 0.0306 (4) | |
| C8 | 0.7505 (3) | −0.10822 (12) | 0.12182 (16) | 0.0316 (4) | |
| N1 | 0.6957 (3) | 0.12118 (10) | −0.19549 (14) | 0.0382 (4) | |
| N2 | 0.7003 (3) | 0.18189 (11) | −0.27055 (14) | 0.0413 (5) | |
| N3 | 0.7922 (3) | 0.24562 (10) | −0.21978 (14) | 0.0390 (4) | |
| N4 | 0.8508 (2) | 0.22850 (10) | −0.11037 (14) | 0.0366 (4) | |
| N5 | 0.7909 (3) | −0.15548 (10) | 0.21375 (15) | 0.0386 (4) | |
| N6 | 0.7168 (3) | −0.23122 (11) | 0.18397 (16) | 0.0433 (5) | |
| N7 | 0.6331 (3) | −0.23186 (11) | 0.07931 (16) | 0.0426 (5) | |
| N8 | 0.6528 (2) | −0.15522 (10) | 0.03918 (14) | 0.0350 (4) | |
| H8 | 0.6097 | −0.1389 | −0.0286 | 0.042* | |
| O1 | 0.5231 (2) | 0.12872 (9) | 0.51251 (12) | 0.0429 (4) | |
| H1A | 0.5065 | 0.1746 | 0.4769 | 0.064* | |
| H1B | 0.5592 | 0.1400 | 0.5819 | 0.064* | |
| O2 | 0.2173 (2) | 0.00747 (9) | 0.46229 (14) | 0.0488 (4) | |
| H2A | 0.1668 | 0.0466 | 0.4914 | 0.073* | |
| H2B | 0.1493 | −0.0367 | 0.4605 | 0.073* | |
| O3 | 0.5006 (3) | −0.00392 (9) | 0.67073 (12) | 0.0502 (5) | |
| H3A | 0.5486 | 0.0092 | 0.7382 | 0.075* | |
| H3B | 0.4035 | −0.0323 | 0.6713 | 0.075* | |
| O4 | 0.5005 (2) | 0.14487 (9) | 0.18614 (12) | 0.0431 (4) | |
| H4A | 0.4286 | 0.1770 | 0.2133 | 0.065* | |
| H4B | 0.6097 | 0.1676 | 0.2042 | 0.065* | |
| O5 | 0.5296 (2) | 0.37416 (9) | 0.05607 (13) | 0.0458 (4) | |
| H5A | 0.5036 | 0.3291 | 0.0216 | 0.069* | |
| H5B | 0.5769 | 0.3613 | 0.1249 | 0.069* |
| Mg1 | 0.0341 (5) | 0.0253 (5) | 0.0291 (5) | −0.0006 (4) | 0.0003 (4) | −0.0021 (4) |
| C1 | 0.0325 (10) | 0.0248 (10) | 0.0301 (10) | −0.0002 (8) | 0.0018 (8) | −0.0012 (8) |
| C2 | 0.0327 (10) | 0.0260 (10) | 0.0294 (10) | 0.0000 (8) | 0.0039 (8) | −0.0004 (8) |
| C3 | 0.0515 (13) | 0.0301 (11) | 0.0355 (11) | −0.0112 (9) | 0.0009 (10) | −0.0005 (9) |
| C4 | 0.0660 (15) | 0.0393 (13) | 0.0313 (11) | −0.0155 (11) | −0.0075 (11) | −0.0019 (10) |
| C5 | 0.0333 (10) | 0.0275 (10) | 0.0288 (10) | −0.0016 (8) | 0.0011 (8) | −0.0033 (8) |
| C6 | 0.0571 (14) | 0.0362 (12) | 0.0303 (11) | −0.0057 (10) | −0.0023 (10) | 0.0068 (9) |
| C7 | 0.0337 (10) | 0.0251 (10) | 0.0324 (10) | 0.0011 (8) | 0.0057 (8) | 0.0011 (8) |
| C8 | 0.0355 (10) | 0.0265 (10) | 0.0317 (10) | 0.0010 (8) | 0.0047 (8) | 0.0002 (8) |
| N1 | 0.0507 (11) | 0.0283 (9) | 0.0306 (9) | −0.0049 (8) | −0.0027 (8) | 0.0021 (7) |
| N2 | 0.0546 (12) | 0.0317 (10) | 0.0320 (9) | −0.0031 (8) | −0.0036 (8) | 0.0018 (8) |
| N3 | 0.0504 (11) | 0.0303 (9) | 0.0318 (9) | −0.0041 (8) | −0.0016 (8) | 0.0032 (7) |
| N4 | 0.0479 (10) | 0.0279 (9) | 0.0305 (9) | −0.0054 (8) | 0.0001 (8) | 0.0024 (7) |
| N5 | 0.0485 (11) | 0.0286 (9) | 0.0355 (9) | −0.0012 (8) | 0.0018 (8) | 0.0040 (7) |
| N6 | 0.0545 (11) | 0.0287 (10) | 0.0432 (11) | −0.0044 (8) | 0.0023 (9) | 0.0043 (8) |
| N7 | 0.0517 (11) | 0.0288 (10) | 0.0445 (11) | −0.0041 (8) | 0.0039 (9) | 0.0003 (8) |
| N8 | 0.0444 (10) | 0.0267 (9) | 0.0317 (9) | −0.0027 (7) | 0.0027 (8) | 0.0012 (7) |
| O1 | 0.0627 (10) | 0.0246 (8) | 0.0331 (8) | 0.0012 (7) | −0.0083 (7) | 0.0011 (6) |
| O2 | 0.0354 (8) | 0.0437 (10) | 0.0649 (11) | −0.0002 (7) | 0.0050 (8) | −0.0130 (8) |
| O3 | 0.0754 (12) | 0.0427 (9) | 0.0300 (8) | −0.0199 (8) | 0.0052 (8) | −0.0035 (7) |
| O4 | 0.0500 (9) | 0.0369 (9) | 0.0406 (8) | 0.0009 (7) | 0.0055 (7) | −0.0070 (7) |
| O5 | 0.0583 (10) | 0.0314 (8) | 0.0428 (9) | −0.0052 (7) | 0.0000 (8) | 0.0009 (7) |
| Mg1—O2 | 2.0425 (15) | C7—C8 | 1.464 (3) |
| Mg1—O2i | 2.0425 (15) | C8—N5 | 1.332 (3) |
| Mg1—O1 | 2.0744 (14) | C8—N8 | 1.340 (3) |
| Mg1—O1i | 2.0744 (14) | N1—N2 | 1.341 (2) |
| Mg1—O3 | 2.0793 (15) | N2—N3 | 1.308 (2) |
| Mg1—O3i | 2.0793 (15) | N3—N4 | 1.340 (2) |
| Mg1—H3B | 2.3995 | N5—N6 | 1.350 (2) |
| C1—N4 | 1.334 (2) | N6—N7 | 1.294 (3) |
| C1—N1 | 1.335 (3) | N7—N8 | 1.342 (2) |
| C1—C2 | 1.472 (3) | N8—H8 | 0.8600 |
| C2—C3 | 1.390 (3) | O1—H1A | 0.8500 |
| C2—C5 | 1.393 (3) | O1—H1B | 0.8501 |
| C3—C4 | 1.379 (3) | O2—H2A | 0.8454 |
| C3—H3 | 0.9300 | O2—H2B | 0.8653 |
| C4—C6 | 1.381 (3) | O3—H3A | 0.8500 |
| C4—H4 | 0.9300 | O3—H3B | 0.8500 |
| C5—C7 | 1.393 (3) | O4—H4A | 0.8555 |
| C5—H5 | 0.9300 | O4—H4B | 0.8695 |
| C6—C7 | 1.389 (3) | O5—H5A | 0.8375 |
| C6—H6 | 0.9300 | O5—H5B | 0.8620 |
| O2—Mg1—O2i | 180.0 | C2—C5—C7 | 120.11 (18) |
| O2—Mg1—O1 | 91.28 (6) | C2—C5—H5 | 119.9 |
| O2i—Mg1—O1 | 88.72 (6) | C7—C5—H5 | 119.9 |
| O2—Mg1—O1i | 88.72 (6) | C4—C6—C7 | 119.99 (19) |
| O2i—Mg1—O1i | 91.28 (6) | C4—C6—H6 | 120.0 |
| O1—Mg1—O1i | 180.0 | C7—C6—H6 | 120.0 |
| O2—Mg1—O3 | 90.74 (7) | C6—C7—C5 | 119.84 (19) |
| O2i—Mg1—O3 | 89.26 (7) | C6—C7—C8 | 118.06 (18) |
| O1—Mg1—O3 | 88.51 (6) | C5—C7—C8 | 122.08 (18) |
| O1i—Mg1—O3 | 91.49 (6) | N5—C8—N8 | 107.48 (17) |
| O2—Mg1—O3i | 89.26 (7) | N5—C8—C7 | 125.53 (18) |
| O2i—Mg1—O3i | 90.74 (7) | N8—C8—C7 | 126.96 (18) |
| O1—Mg1—O3i | 91.49 (6) | C1—N1—N2 | 105.03 (16) |
| O1i—Mg1—O3i | 88.51 (6) | N3—N2—N1 | 109.31 (16) |
| O3—Mg1—O3i | 180.0 | N2—N3—N4 | 109.65 (16) |
| O2—Mg1—H3B | 74.4 | C1—N4—N3 | 104.93 (16) |
| O2i—Mg1—H3B | 105.6 | C8—N5—N6 | 106.28 (17) |
| O1—Mg1—H3B | 100.7 | N7—N6—N5 | 110.72 (16) |
| O1i—Mg1—H3B | 79.3 | N6—N7—N8 | 106.59 (16) |
| O3—Mg1—H3B | 20.3 | C8—N8—N7 | 108.93 (16) |
| O3i—Mg1—H3B | 159.7 | C8—N8—H8 | 125.5 |
| N4—C1—N1 | 111.08 (17) | N7—N8—H8 | 125.5 |
| N4—C1—C2 | 124.57 (17) | Mg1—O1—H1A | 145.5 |
| N1—C1—C2 | 124.32 (18) | Mg1—O1—H1B | 106.7 |
| C3—C2—C5 | 119.16 (18) | H1A—O1—H1B | 107.7 |
| C3—C2—C1 | 119.90 (18) | Mg1—O2—H2A | 117.9 |
| C5—C2—C1 | 120.90 (17) | Mg1—O2—H2B | 121.1 |
| C4—C3—C2 | 120.65 (19) | H2A—O2—H2B | 108.4 |
| C4—C3—H3 | 119.7 | Mg1—O3—H3A | 150.7 |
| C2—C3—H3 | 119.7 | Mg1—O3—H3B | 101.6 |
| C3—C4—C6 | 120.2 (2) | H3A—O3—H3B | 107.7 |
| C3—C4—H4 | 119.9 | H4A—O4—H4B | 105.4 |
| C6—C4—H4 | 119.9 | H5A—O5—H5B | 106.4 |
| H··· | ||||
| O5—H5B···N5ii | 0.86 | 2.02 | 2.876 (2) | 172 |
| O5—H5A···N7iii | 0.84 | 2.11 | 2.921 (2) | 164 |
| O4—H4B···N6ii | 0.87 | 2.32 | 3.067 (2) | 144 |
| O4—H4A···N3iv | 0.86 | 1.89 | 2.739 (2) | 174 |
| O3—H3A···N1v | 0.85 | 2.16 | 2.786 (2) | 130 |
| O2—H2B···O5vi | 0.87 | 1.93 | 2.787 (2) | 172 |
| O2—H2A···O5iv | 0.85 | 1.90 | 2.737 (2) | 173 |
| O1—H1B···N2v | 0.85 | 1.99 | 2.821 (2) | 164 |
| O1—H1A···N4iv | 0.85 | 2.09 | 2.880 (2) | 156 |
| N8—H8···O4iii | 0.86 | 1.92 | 2.743 (2) | 159 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5 | 0.86 | 2.02 | 2.876 (2) | 172 |
| O5—H5 | 0.84 | 2.11 | 2.921 (2) | 164 |
| O4—H4 | 0.87 | 2.32 | 3.067 (2) | 144 |
| O4—H4 | 0.86 | 1.89 | 2.739 (2) | 174 |
| O3—H3 | 0.85 | 2.16 | 2.786 (2) | 130 |
| O2—H2 | 0.87 | 1.93 | 2.787 (2) | 172 |
| O2—H2 | 0.85 | 1.90 | 2.737 (2) | 173 |
| O1—H1 | 0.85 | 1.99 | 2.821 (2) | 164 |
| O1—H1 | 0.85 | 2.09 | 2.880 (2) | 156 |
| N8—H8⋯O4ii | 0.86 | 1.92 | 2.743 (2) | 159 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .