| Literature DB >> 22346821 |
Susanne Wöhlert1, Christian Näther.
Abstract
The asymmetric unit of the title compound, [Co(NCS)(2)(C(13)H(14)N(2))(CH(3)OH)(2)], consists of one cobalt(II) cation located on a center of inversion, one half of a 1,3-bis-(pyridin-4-yl)propane ligand located on a twofold rotation axis, as well as one thio-cyanate anion and one methanol mol-ecule in general positions. The cobalt(II) cation is coordinated by two terminal N-bonded thio-cyanate anions and two N-bonded 1,3-bis-(pyridin-4-yl)propane ligands, as well as two O atoms of methanol mol-ecules in a slightly distorted octa-hedral coordination mode. Adjacent cations are connected into chains parallel to [10[Formula: see text]] by the bridging 1,3-bis-(pyridin-4-yl)propane ligands. These chains are connected through inter-molecular O-H⋯S hydrogen bonds between the methanol hy-droxy group and the terminal S atom of the thio-cyanate anion.Entities:
Year: 2012 PMID: 22346821 PMCID: PMC3274874 DOI: 10.1107/S1600536812000499
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(NCS)2(C13H14N2)(CH4O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 7860 reflections |
| θ = 2.9–28.0° | |
| µ = 1.04 mm−1 | |
| β = 95.176 (5)° | Block, light-green |
| 0.12 × 0.02 × 0.02 mm | |
| Stoe IPDS-2 diffractometer | 2463 independent reflections |
| Radiation source: fine-focus sealed tube | 2105 reflections with |
| graphite | |
| ω scans | θmax = 28.0°, θmin = 2.9° |
| Absorption correction: numerical ( | |
| 7860 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2463 reflections | (Δ/σ)max < 0.001 |
| 125 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| Co1 | 0.2500 | 0.2500 | 0.5000 | 0.04506 (12) | |
| N1 | 0.30569 (8) | 0.4522 (2) | 0.44450 (13) | 0.0576 (4) | |
| C1 | 0.33565 (9) | 0.5317 (3) | 0.39083 (14) | 0.0489 (4) | |
| S1 | 0.37746 (3) | 0.64359 (9) | 0.31502 (4) | 0.06640 (17) | |
| N10 | 0.16009 (7) | 0.3899 (2) | 0.45687 (11) | 0.0487 (4) | |
| C10 | 0.10533 (9) | 0.3059 (3) | 0.42263 (15) | 0.0539 (4) | |
| H10 | 0.1051 | 0.1831 | 0.4236 | 0.065* | |
| C11 | 0.04904 (9) | 0.3927 (3) | 0.38589 (15) | 0.0574 (5) | |
| H11 | 0.0123 | 0.3283 | 0.3625 | 0.069* | |
| C12 | 0.04733 (9) | 0.5744 (3) | 0.38384 (14) | 0.0525 (5) | |
| C13 | 0.10384 (10) | 0.6616 (3) | 0.42123 (17) | 0.0607 (5) | |
| H13 | 0.1050 | 0.7844 | 0.4224 | 0.073* | |
| C14 | 0.15805 (10) | 0.5664 (3) | 0.45640 (16) | 0.0568 (5) | |
| H14 | 0.1952 | 0.6279 | 0.4812 | 0.068* | |
| C15 | −0.01223 (10) | 0.6752 (4) | 0.34160 (16) | 0.0639 (6) | |
| H15A | −0.0263 | 0.7532 | 0.3928 | 0.077* | |
| H15B | −0.0474 | 0.5923 | 0.3238 | 0.077* | |
| C16 | 0.0000 | 0.7841 (4) | 0.2500 | 0.0652 (8) | |
| H16A | 0.0375 | 0.8597 | 0.2666 | 0.078* | 0.50 |
| H16B | −0.0375 | 0.8597 | 0.2334 | 0.078* | 0.50 |
| O1 | 0.24410 (8) | 0.1222 (3) | 0.35756 (11) | 0.0623 (4) | |
| H1O1 | 0.2117 (13) | 0.118 (4) | 0.328 (2) | 0.076 (9)* | |
| C2 | 0.29545 (11) | 0.1156 (4) | 0.29272 (18) | 0.0723 (7) | |
| H2A | 0.2931 | 0.2178 | 0.2502 | 0.108* | |
| H2B | 0.2909 | 0.0109 | 0.2524 | 0.108* | |
| H2C | 0.3369 | 0.1138 | 0.3319 | 0.108* |
| Co1 | 0.03980 (18) | 0.0573 (2) | 0.03795 (17) | −0.00119 (15) | 0.00289 (12) | 0.00289 (15) |
| N1 | 0.0515 (9) | 0.0658 (11) | 0.0553 (9) | −0.0043 (8) | 0.0043 (7) | 0.0111 (8) |
| C1 | 0.0442 (9) | 0.0541 (10) | 0.0472 (9) | 0.0013 (8) | −0.0023 (7) | 0.0005 (8) |
| S1 | 0.0598 (3) | 0.0797 (4) | 0.0602 (3) | −0.0151 (3) | 0.0084 (2) | 0.0112 (3) |
| N10 | 0.0408 (7) | 0.0627 (10) | 0.0423 (8) | 0.0013 (7) | 0.0013 (6) | 0.0001 (7) |
| C10 | 0.0463 (10) | 0.0645 (12) | 0.0506 (10) | −0.0046 (8) | 0.0018 (8) | 0.0022 (9) |
| C11 | 0.0423 (9) | 0.0770 (14) | 0.0522 (10) | −0.0071 (9) | 0.0002 (8) | 0.0007 (10) |
| C12 | 0.0426 (9) | 0.0757 (13) | 0.0391 (9) | 0.0062 (9) | 0.0037 (7) | −0.0040 (9) |
| C13 | 0.0564 (11) | 0.0602 (13) | 0.0633 (12) | 0.0075 (10) | −0.0061 (9) | −0.0088 (10) |
| C14 | 0.0473 (10) | 0.0624 (12) | 0.0585 (11) | −0.0006 (9) | −0.0072 (8) | −0.0075 (10) |
| C15 | 0.0471 (10) | 0.0889 (16) | 0.0552 (11) | 0.0141 (10) | 0.0010 (9) | −0.0059 (11) |
| C16 | 0.0563 (16) | 0.066 (2) | 0.0705 (19) | 0.000 | −0.0128 (14) | 0.000 |
| O1 | 0.0474 (8) | 0.0938 (12) | 0.0454 (7) | 0.0011 (8) | 0.0029 (6) | −0.0106 (8) |
| C2 | 0.0583 (12) | 0.1018 (19) | 0.0582 (12) | 0.0048 (12) | 0.0135 (10) | −0.0160 (13) |
| Co1—N1 | 2.0887 (17) | C12—C15 | 1.509 (3) |
| Co1—N1i | 2.0887 (17) | C13—C14 | 1.374 (3) |
| Co1—O1 | 2.1372 (15) | C13—H13 | 0.9300 |
| Co1—O1i | 2.1372 (15) | C14—H14 | 0.9300 |
| Co1—N10 | 2.1624 (15) | C15—C16 | 1.520 (3) |
| Co1—N10i | 2.1624 (15) | C15—H15A | 0.9700 |
| N1—C1 | 1.158 (2) | C15—H15B | 0.9700 |
| C1—S1 | 1.628 (2) | C16—C15ii | 1.520 (3) |
| N10—C14 | 1.337 (3) | C16—H16A | 0.9700 |
| N10—C10 | 1.337 (2) | C16—H16B | 0.9700 |
| C10—C11 | 1.382 (3) | O1—C2 | 1.428 (2) |
| C10—H10 | 0.9300 | O1—H1O1 | 0.74 (3) |
| C11—C12 | 1.376 (3) | C2—H2A | 0.9600 |
| C11—H11 | 0.9300 | C2—H2B | 0.9600 |
| C12—C13 | 1.390 (3) | C2—H2C | 0.9600 |
| N1—Co1—N1i | 180.00 (10) | C13—C12—C15 | 121.2 (2) |
| N1—Co1—O1 | 90.07 (7) | C14—C13—C12 | 120.0 (2) |
| N1i—Co1—O1 | 89.93 (7) | C14—C13—H13 | 120.0 |
| N1—Co1—O1i | 89.93 (7) | C12—C13—H13 | 120.0 |
| N1i—Co1—O1i | 90.07 (7) | N10—C14—C13 | 123.36 (19) |
| O1—Co1—O1i | 180.0 | N10—C14—H14 | 118.3 |
| N1—Co1—N10 | 91.57 (6) | C13—C14—H14 | 118.3 |
| N1i—Co1—N10 | 88.43 (6) | C12—C15—C16 | 113.01 (16) |
| O1—Co1—N10 | 90.23 (6) | C12—C15—H15A | 109.0 |
| O1i—Co1—N10 | 89.77 (6) | C16—C15—H15A | 109.0 |
| N1—Co1—N10i | 88.43 (6) | C12—C15—H15B | 109.0 |
| N1i—Co1—N10i | 91.57 (6) | C16—C15—H15B | 109.0 |
| O1—Co1—N10i | 89.77 (6) | H15A—C15—H15B | 107.8 |
| O1i—Co1—N10i | 90.23 (6) | C15—C16—C15ii | 114.3 (3) |
| N10—Co1—N10i | 180.00 (8) | C15—C16—H16A | 108.7 |
| C1—N1—Co1 | 160.42 (17) | C15ii—C16—H16A | 108.7 |
| N1—C1—S1 | 179.7 (2) | C15—C16—H16B | 108.7 |
| C14—N10—C10 | 116.65 (17) | C15ii—C16—H16B | 108.7 |
| C14—N10—Co1 | 121.10 (13) | H16A—C16—H16B | 107.6 |
| C10—N10—Co1 | 122.08 (14) | C2—O1—Co1 | 125.17 (14) |
| N10—C10—C11 | 123.2 (2) | C2—O1—H1O1 | 110 (2) |
| N10—C10—H10 | 118.4 | Co1—O1—H1O1 | 118 (2) |
| C11—C10—H10 | 118.4 | O1—C2—H2A | 109.5 |
| C12—C11—C10 | 120.10 (19) | O1—C2—H2B | 109.5 |
| C12—C11—H11 | 120.0 | H2A—C2—H2B | 109.5 |
| C10—C11—H11 | 120.0 | O1—C2—H2C | 109.5 |
| C11—C12—C13 | 116.67 (18) | H2A—C2—H2C | 109.5 |
| C11—C12—C15 | 122.1 (2) | H2B—C2—H2C | 109.5 |
| H··· | ||||
| O1—H1O1···S1iii | 0.74 (4) | 2.54 (4) | 3.2539 (19) | 165 (4) |
Selected bond lengths (Å)
| Co1—N1 | 2.0887 (17) |
| Co1—O1 | 2.1372 (15) |
| Co1—N10 | 2.1624 (15) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.74 (4) | 2.54 (4) | 3.2539 (19) | 165 (4) |
Symmetry code: (i) .