Literature DB >> 22346798

catena-Poly[[diaqua-(2,2'-bipyridine-κN,N')zinc]-μ-2,2'-[1,4-phenylene-bis(sulfanedi-yl)]diacetato-κO:O'].

Hong Lin, Xiao-Juan Wang.   

Abstract

In the polymeric title complex, [Zn(C(10)H(8)O(4)S(2))(C(10)H(8)N(2))(H(2)O)(2)](n), the Zn(2+) ion lies on a twofold rotation axis and exhibits an octa-hedral environment, in which it is coordinated by two trans O atoms from two symmetry-related 2,2'-[1,4-phenyl-enebis(sulfanedi-yl)]diacetate anions, two N atoms from one 2,2'-bipyridine ligand, and two cis O atoms from water mol-ecules. The dihedral angle between the two pyridine rings is 11.5 (1)°. Adjacent Zn(2+) ions are bridged in a monodentate manner by the diacetate anions, forming a chain structure extending parallel to [101], and are further linked into the final three-dimensional structure by O-H⋯O hydrogen bonds between the coordinating water mol-ecules as donor and the non-coordinating carboxyl-ate O atoms as acceptor atoms.

Entities:  

Year:  2012        PMID: 22346798      PMCID: PMC3274851          DOI: 10.1107/S1600536811055310

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to 1,4-benzene­bis­(thio­acetic acid), including its synthesis and coordination behaviour, see: Yin & Feng (2009 ▶); Yin et al. (2009 ▶); Chen et al. (2010 ▶); Wang et al. (2011 ▶); Jiang et al. (2012 ▶).

Experimental

Crystal data

[Zn(C10H8O4S2)(C10H8N2)(H2O)2] M = 513.87 Monoclinic, a = 20.4396 (8) Å b = 12.8695 (8) Å c = 7.9798 (4) Å β = 90.765 (3)° V = 2098.88 (19) Å3 Z = 4 Mo Kα radiation μ = 1.41 mm−1 T = 296 K 0.22 × 0.16 × 0.11 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.761, T max = 0.853 16253 measured reflections 2448 independent reflections 2237 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.070 S = 1.04 2448 reflections 147 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.31 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Crystal Impact, 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811055310/wm2568sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811055310/wm2568Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C10H8O4S2)(C10H8N2)(H2O)2]F(000) = 1056
Mr = 513.87Dx = 1.626 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 7952 reflections
a = 20.4396 (8) Åθ = 1.9–27.7°
b = 12.8695 (8) ŵ = 1.41 mm1
c = 7.9798 (4) ÅT = 296 K
β = 90.765 (3)°Block, colourless
V = 2098.88 (19) Å30.22 × 0.16 × 0.11 mm
Z = 4
Bruker APEXII CCD diffractometer2448 independent reflections
Radiation source: fine-focus sealed tube2237 reflections with I > 2σ(I)
graphiteRint = 0.026
ω scansθmax = 27.7°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −26→26
Tmin = 0.761, Tmax = 0.853k = −15→16
16253 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.070H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.043P)2 + 0.7442P] where P = (Fo2 + 2Fc2)/3
2448 reflections(Δ/σ)max = 0.001
147 parametersΔρmax = 0.31 e Å3
3 restraintsΔρmin = −0.31 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.50000.725191 (16)0.25000.03569 (9)
S10.676748 (19)0.62114 (4)0.78141 (5)0.04863 (12)
N10.44065 (7)0.85617 (9)0.31662 (16)0.0391 (3)
O1W0.57320 (6)0.61941 (8)0.18683 (14)0.0435 (3)
H1WA0.5703 (10)0.5693 (13)0.123 (2)0.052*
H1WB0.5785 (10)0.5933 (15)0.2793 (18)0.052*
O10.54190 (6)0.72445 (7)0.49896 (13)0.0398 (2)
O20.57240 (6)0.55857 (8)0.50514 (13)0.0446 (3)
C10.38250 (9)0.85086 (14)0.3913 (2)0.0484 (4)
H1A0.36330.78610.40610.058*
C20.34980 (10)0.93842 (17)0.4477 (2)0.0597 (5)
H2A0.30890.93290.49660.072*
C30.37950 (11)1.03389 (15)0.4292 (3)0.0618 (5)
H3A0.35941.09370.46880.074*
C40.43876 (10)1.03996 (13)0.3523 (2)0.0532 (4)
H4A0.45921.10400.33910.064*
C50.46836 (8)0.94978 (11)0.29374 (19)0.0403 (3)
C60.56711 (6)0.64669 (10)0.56961 (17)0.0319 (3)
C70.59312 (7)0.66315 (13)0.74760 (18)0.0395 (3)
H7A0.56520.62580.82450.047*
H7B0.59010.73650.77460.047*
C80.71752 (7)0.69346 (13)0.6228 (2)0.0408 (3)
C90.71738 (8)0.65950 (13)0.4586 (2)0.0479 (4)
H9A0.69580.59830.43000.057*
C100.75080 (8)0.78402 (14)0.6640 (2)0.0475 (4)
H10A0.75180.80700.77450.057*
U11U22U33U12U13U23
Zn10.04999 (16)0.02228 (13)0.03467 (14)0.000−0.00485 (10)0.000
S10.0406 (2)0.0562 (3)0.0490 (2)0.00141 (17)−0.00659 (17)0.01881 (18)
N10.0518 (7)0.0284 (6)0.0367 (6)0.0019 (5)−0.0129 (5)−0.0020 (5)
O1W0.0664 (7)0.0291 (5)0.0349 (5)0.0064 (5)−0.0039 (5)−0.0045 (4)
O10.0540 (6)0.0316 (5)0.0336 (5)0.0051 (4)−0.0085 (5)−0.0008 (4)
O20.0661 (7)0.0290 (5)0.0385 (5)0.0007 (5)−0.0048 (5)0.0043 (4)
C10.0531 (9)0.0449 (9)0.0468 (9)0.0033 (7)−0.0084 (7)−0.0017 (7)
C20.0590 (11)0.0643 (12)0.0555 (11)0.0169 (9)−0.0085 (8)−0.0076 (9)
C30.0744 (13)0.0478 (10)0.0626 (11)0.0254 (9)−0.0234 (9)−0.0171 (8)
C40.0680 (11)0.0309 (8)0.0600 (10)0.0107 (7)−0.0274 (9)−0.0082 (7)
C50.0546 (8)0.0258 (6)0.0398 (7)0.0028 (6)−0.0231 (6)−0.0023 (5)
C60.0324 (6)0.0328 (7)0.0304 (6)−0.0034 (5)0.0012 (5)0.0042 (5)
C70.0400 (7)0.0479 (8)0.0307 (7)0.0045 (6)−0.0003 (6)0.0028 (6)
C80.0310 (7)0.0437 (8)0.0475 (8)0.0024 (6)−0.0010 (6)0.0051 (7)
C90.0418 (8)0.0454 (9)0.0564 (10)−0.0066 (7)0.0025 (7)−0.0064 (7)
C100.0420 (8)0.0553 (10)0.0452 (9)−0.0039 (7)0.0003 (7)−0.0075 (7)
Zn1—O1Wi2.0896 (11)C2—C31.379 (3)
Zn1—O1W2.0896 (11)C2—H2A0.9300
Zn1—N1i2.1477 (13)C3—C41.367 (3)
Zn1—N12.1477 (13)C3—H3A0.9300
Zn1—O1i2.1529 (10)C4—C51.392 (2)
Zn1—O12.1529 (10)C4—H4A0.9300
S1—C81.7861 (16)C5—C5i1.478 (4)
S1—C71.8095 (15)C6—C71.5247 (19)
N1—C11.339 (2)C7—H7A0.9700
N1—C51.3447 (19)C7—H7B0.9700
O1W—H1WA0.825 (14)C8—C91.382 (2)
O1W—H1WB0.817 (14)C8—C101.387 (2)
O1—C61.2557 (16)C9—C10ii1.388 (2)
O2—C61.2506 (17)C9—H9A0.9300
C1—C21.388 (3)C10—C9ii1.388 (2)
C1—H1A0.9300C10—H10A0.9300
O1Wi—Zn1—O1W98.69 (7)C1—C2—H2A120.8
O1Wi—Zn1—N1i168.43 (5)C4—C3—C2119.51 (17)
O1W—Zn1—N1i92.47 (5)C4—C3—H3A120.2
O1Wi—Zn1—N192.47 (5)C2—C3—H3A120.2
O1W—Zn1—N1168.43 (5)C3—C4—C5119.63 (17)
N1i—Zn1—N176.59 (7)C3—C4—H4A120.2
O1Wi—Zn1—O1i86.70 (4)C5—C4—H4A120.2
O1W—Zn1—O1i92.97 (4)N1—C5—C4121.03 (16)
N1i—Zn1—O1i89.66 (4)N1—C5—C5i115.91 (9)
N1—Zn1—O1i90.74 (4)C4—C5—C5i123.05 (11)
O1Wi—Zn1—O192.97 (4)O2—C6—O1125.11 (13)
O1W—Zn1—O186.70 (4)O2—C6—C7118.57 (12)
N1i—Zn1—O190.74 (4)O1—C6—C7116.32 (12)
N1—Zn1—O189.66 (4)C6—C7—S1114.48 (10)
O1i—Zn1—O1179.49 (5)C6—C7—H7A108.6
C8—S1—C7100.80 (7)S1—C7—H7A108.6
C1—N1—C5118.97 (14)C6—C7—H7B108.6
C1—N1—Zn1125.31 (11)S1—C7—H7B108.6
C5—N1—Zn1115.42 (11)H7A—C7—H7B107.6
Zn1—O1W—H1WA127.8 (14)C9—C8—C10119.04 (15)
Zn1—O1W—H1WB97.9 (14)C9—C8—S1120.80 (13)
H1WA—O1W—H1WB104.3 (17)C10—C8—S1120.15 (13)
C6—O1—Zn1125.00 (9)C8—C9—C10ii120.52 (16)
N1—C1—C2122.49 (17)C8—C9—H9A119.7
N1—C1—H1A118.8C10ii—C9—H9A119.7
C2—C1—H1A118.8C8—C10—C9ii120.43 (16)
C3—C2—C1118.3 (2)C8—C10—H10A119.8
C3—C2—H2A120.8C9ii—C10—H10A119.8
O1Wi—Zn1—N1—C17.41 (13)C2—C3—C4—C50.0 (3)
O1W—Zn1—N1—C1−157.1 (2)C1—N1—C5—C42.5 (2)
N1i—Zn1—N1—C1−176.39 (15)Zn1—N1—C5—C4−171.45 (11)
O1i—Zn1—N1—C194.13 (13)C1—N1—C5—C5i−178.37 (15)
O1—Zn1—N1—C1−85.55 (13)Zn1—N1—C5—C5i7.63 (19)
O1Wi—Zn1—N1—C5−179.03 (10)C3—C4—C5—N1−2.3 (2)
O1W—Zn1—N1—C516.4 (3)C3—C4—C5—C5i178.72 (18)
N1i—Zn1—N1—C5−2.82 (7)Zn1—O1—C6—O21.0 (2)
O1i—Zn1—N1—C5−92.30 (10)Zn1—O1—C6—C7−179.21 (9)
O1—Zn1—N1—C588.01 (10)O2—C6—C7—S151.79 (17)
O1Wi—Zn1—O1—C663.39 (12)O1—C6—C7—S1−128.01 (12)
O1W—Zn1—O1—C6−35.15 (12)C8—S1—C7—C655.61 (13)
N1i—Zn1—O1—C6−127.58 (12)C7—S1—C8—C9−80.93 (14)
N1—Zn1—O1—C6155.84 (12)C7—S1—C8—C10100.14 (14)
O1i—Zn1—O1—C614.13 (13)C10—C8—C9—C10ii−1.0 (3)
C5—N1—C1—C2−0.6 (2)S1—C8—C9—C10ii−179.94 (13)
Zn1—N1—C1—C2172.80 (13)C9—C8—C10—C9ii1.0 (3)
N1—C1—C2—C3−1.7 (3)S1—C8—C10—C9ii179.95 (13)
C1—C2—C3—C41.9 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O2iii0.83 (1)1.90 (2)2.7107 (15)170 (2)
O1W—H1WB···O20.82 (1)1.86 (2)2.6582 (16)164 (2)
Table 1

Selected bond lengths (Å)

Zn1—O1W2.0896 (11)
Zn1—N12.1477 (13)
Zn1—O12.1529 (10)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O2i0.83 (1)1.90 (2)2.7107 (15)170 (2)
O1W—H1WB⋯O20.82 (1)1.86 (2)2.6582 (16)164 (2)

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2,2'-(p-Phenyl-enedithio)diacetic acid.

Authors:  Jian-Ling Yin; Yun-Long Feng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-07
  2 in total

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