Literature DB >> 22343541

Development of microsatellite primers of the largest seagrass, Enhalus acoroides (Hydrocharitaceae).

Hui Gao1, Kai Jiang, Yan Geng, Xiao-Yong Chen.   

Abstract

PREMISE OF THE STUDY: Microsatellite primers were developed for the seagrass Enhalus acoroides to investigate genetic variation and identify clonal structure. METHODS AND
RESULTS: Four polymorphic loci and 32 monomorphic loci were developed in E. acoroides. Two to four alleles per locus were observed at the polymorphic loci across 60 individuals of two E. acoroides populations. The observed and expected heterozygosities within populations ranged from 0.100 to 0.5667 and from 0.0977 to 0.5079, respectively.
CONCLUSIONS: Our study revealed very low polymorphism in E. acoroides, even at the polymorphic loci. Nevertheless, these primers are a useful tool to study genetic variation, clonal structure, and mating system.

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Year:  2012        PMID: 22343541     DOI: 10.3732/ajb.1100412

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  5 in total

Review 1.  The emergence of molecular profiling and omics techniques in seagrass biology; furthering our understanding of seagrasses.

Authors:  Peter A Davey; Mathieu Pernice; Gaurav Sablok; Anthony Larkum; Huey Tyng Lee; Agnieszka Golicz; David Edwards; Rudy Dolferus; Peter Ralph
Journal:  Funct Integr Genomics       Date:  2016-07-21       Impact factor: 3.410

2.  Strong genetic differentiation in tropical seagrass Enhalus acoroides (Hydrocharitaceae) at the Indo-Malay Archipelago revealed by microsatellite DNA.

Authors:  I Nyoman Giri Putra; Yuliana Fitri Syamsuni; Beginer Subhan; Made Pharmawati; Hawis Madduppa
Journal:  PeerJ       Date:  2018-03-13       Impact factor: 2.984

Review 3.  Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants.

Authors:  Sima Taheri; Thohirah Lee Abdullah; Mohd Rafii Yusop; Mohamed Musa Hanafi; Mahbod Sahebi; Parisa Azizi; Redmond Ramin Shamshiri
Journal:  Molecules       Date:  2018-02-13       Impact factor: 4.411

4.  Persistent Clones and Local Seed Recruitment Contribute to the Resilience of Enhalus acoroides Populations Under Disturbance.

Authors:  Jasper Dierick; Thi Thuy Hang Phan; Quang Doc Luong; Ludwig Triest
Journal:  Front Plant Sci       Date:  2021-06-04       Impact factor: 5.753

5.  Rare sex or out of reach equilibrium? The dynamics of F IS in partially clonal organisms.

Authors:  Katja Reichel; Jean-Pierre Masson; Florent Malrieu; Sophie Arnaud-Haond; Solenn Stoeckel
Journal:  BMC Genet       Date:  2016-06-10       Impact factor: 2.797

  5 in total

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