Literature DB >> 22342755

Synthetic genomics: potential and limitations.

Michael G Montague1, Carole Lartigue, Sanjay Vashee.   

Abstract

Technologies to synthetically assemble chromosome sized fragments of DNA as well as to enable making thousands of simultaneous changes to existing genomes are now available. These capacities are collectively termed synthetic genomics. The implications of synthetic genomics extend beyond the limited pathway and gene engineering of the past to include the engineering or whole metabolisms, regulatory networks, and even ecosystems. However, in order for those potentials to be met, certain limitations and barriers must be overcome. These barriers no longer include DNA modification and assembly, but instead are based in the limited organisms that many synthetic genomics methods function in, and the limited software for designing custom genomic sequences.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22342755     DOI: 10.1016/j.copbio.2012.01.014

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  6 in total

1.  Genome-wide engineering of an infectious clone of herpes simplex virus type 1 using synthetic genomics assembly methods.

Authors:  Lauren M Oldfield; Peter Grzesik; Alexander A Voorhies; Nina Alperovich; Derek MacMath; Claudia D Najera; Diya Sabrina Chandra; Sanjana Prasad; Vladimir N Noskov; Michael G Montague; Robert M Friedman; Prashant J Desai; Sanjay Vashee
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-19       Impact factor: 11.205

2.  Synthetic genomics and synthetic biology applications between hopes and concerns.

Authors:  Harald König; Daniel Frank; Reinhard Heil; Christopher Coenen
Journal:  Curr Genomics       Date:  2013-03       Impact factor: 2.236

3.  DNA polymerases in biotechnology.

Authors:  Andrew F Gardner; Zvi Kelman
Journal:  Front Microbiol       Date:  2014-12-01       Impact factor: 5.640

Review 4.  Expression of codon optimized genes in microbial systems: current industrial applications and perspectives.

Authors:  Claudia Elena; Pablo Ravasi; María E Castelli; Salvador Peirú; Hugo G Menzella
Journal:  Front Microbiol       Date:  2014-02-04       Impact factor: 5.640

5.  The flavoprotein Mcap0476 (RlmFO) catalyzes m5U1939 modification in Mycoplasma capricolum 23S rRNA.

Authors:  Carole Lartigue; Anne Lebaudy; Alain Blanchard; Basma El Yacoubi; Simon Rose; Henri Grosjean; Stephen Douthwaite
Journal:  Nucleic Acids Res       Date:  2014-06-17       Impact factor: 16.971

6.  Cloning, Assembly, and Modification of the Primary Human Cytomegalovirus Isolate Toledo by Yeast-Based Transformation-Associated Recombination.

Authors:  Sanjay Vashee; Timothy B Stockwell; Nina Alperovich; Evgeniya A Denisova; Daniel G Gibson; Kyle C Cady; Kristofer Miller; Krishna Kannan; Daniel Malouli; Lindsey B Crawford; Alexander A Voorhies; Eric Bruening; Patrizia Caposio; Klaus Früh
Journal:  mSphere       Date:  2017-10-04       Impact factor: 4.389

  6 in total

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