Literature DB >> 22341982

Reaction intermediates and redox state changes in a blue laccase from Steccherinum ochraceum observed by crystallographic high/low X-ray dose experiments.

Marta Ferraroni1, Irene Matera, Alexey Chernykh, Marina Kolomytseva, Ludmila A Golovleva, Andrea Scozzafava, Fabrizio Briganti.   

Abstract

The crystal structure of a blue laccase from Steccherinum ochraceum has been solved at 2.0Å of resolution using a classic data acquisition from a single crystal. The overall structural features are typical of this class of enzymes, however, distances inside the trinuclear copper cluster are indicative of a reduction of the metal centers induced by free electrons produced during the X-ray data collection. UV-visible spectra collected during the X-ray exposure support the progressive reduction of the metal centers. In order to better detect the reduction progression steps in the trinuclear copper site, a multicrystal data collection strategy based on a systematic spread of the X-ray dose over many crystals has been employed. This approach is based on collecting multicrystal data sets, then combining the slices of the individual data sets experiencing the same radiation dose to obtain composite complete data sets at progressively higher doses. Applying this technique, we have been able to capture sequential frames of the enzyme during the metal centers and molecular oxygen reduction mechanism obtaining a three-dimensional movie of the X-ray-driven catalytic conversion of the molecular oxygen in the active site of laccase: first, the copper ions reduction, then the molecular oxygen binding and its reductive splitting, thus allowing to reconstruct the entire catalytic cycle for multicopper oxidases.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22341982     DOI: 10.1016/j.jinorgbio.2012.01.011

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  9 in total

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Authors:  N Hakulinen; J Rouvinen
Journal:  Cell Mol Life Sci       Date:  2015-01-14       Impact factor: 9.261

Review 2.  Copper active sites in biology.

Authors:  Edward I Solomon; David E Heppner; Esther M Johnston; Jake W Ginsbach; Jordi Cirera; Munzarin Qayyum; Matthew T Kieber-Emmons; Christian H Kjaergaard; Ryan G Hadt; Li Tian
Journal:  Chem Rev       Date:  2014-03-03       Impact factor: 60.622

3.  X-ray-induced catalytic active-site reduction of a multicopper oxidase: structural insights into the proton-relay mechanism and O2-reduction states.

Authors:  Hugo Serrano-Posada; Sara Centeno-Leija; Sonia Patricia Rojas-Trejo; Claudia Rodríguez-Almazán; Vivian Stojanoff; Enrique Rudiño-Piñera
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-11-26

4.  The crystal structure of an extracellular catechol oxidase from the ascomycete fungus Aspergillus oryzae.

Authors:  Nina Hakulinen; Chiara Gasparetti; Heidi Kaljunen; Kristiina Kruus; Juha Rouvinen
Journal:  J Biol Inorg Chem       Date:  2013-09-17       Impact factor: 3.358

Review 5.  Multicopper oxidases: intramolecular electron transfer and O2 reduction.

Authors:  Scot Wherland; Ole Farver; Israel Pecht
Journal:  J Biol Inorg Chem       Date:  2014-01-16       Impact factor: 3.358

6.  In crystallo optical spectroscopy (icOS) as a complementary tool on the macromolecular crystallography beamlines of the ESRF.

Authors:  David von Stetten; Thierry Giraud; Philippe Carpentier; Franc Sever; Maxime Terrien; Fabien Dobias; Douglas H Juers; David Flot; Christoph Mueller-Dieckmann; Gordon A Leonard; Daniele de Sanctis; Antoine Royant
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-01-01

7.  Purification and Characterization of Two Novel Laccases from Peniophora lycii.

Authors:  Olga A Glazunova; Konstantin V Moiseenko; Olga S Savinova; Tatyana V Fedorova
Journal:  J Fungi (Basel)       Date:  2020-12-06

8.  Quantifying and comparing radiation damage in the Protein Data Bank.

Authors:  Kathryn L Shelley; Elspeth F Garman
Journal:  Nat Commun       Date:  2022-03-14       Impact factor: 17.694

9.  Enzyme repurposing of a hydrolase as an emergent peroxidase upon metal binding.

Authors:  Nobutaka Fujieda; Jonas Schätti; Edward Stuttfeld; Kei Ohkubo; Timm Maier; Shunichi Fukuzumi; Thomas R Ward
Journal:  Chem Sci       Date:  2015-05-07       Impact factor: 9.825

  9 in total

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